[INFO] cloning repository https://github.com/slazicoicr/bam_histogram_qc
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/slazicoicr/bam_histogram_qc" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 73ee3528cb6a555df461966bbdb6ddb85b23fb9d
[INFO] checking slazicoicr/bam_histogram_qc against master#a609fb45efad59dfd459c76e50899be9f0583b5a for pr-80579
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fslazicoicr%2Fbam_histogram_qc" "/workspace/builds/worker-5/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/slazicoicr/bam_histogram_qc on toolchain a609fb45efad59dfd459c76e50899be9f0583b5a
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/slazicoicr/bam_histogram_qc
[INFO] finished tweaking git repo https://github.com/slazicoicr/bam_histogram_qc
[INFO] tweaked toml for git repo https://github.com/slazicoicr/bam_histogram_qc written to /workspace/builds/worker-5/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 4f66a023e7bcad0efa295d6354a3b03a5922fd859a528cf6f60490f9831b9233
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "4f66a023e7bcad0efa295d6354a3b03a5922fd859a528cf6f60490f9831b9233", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "4f66a023e7bcad0efa295d6354a3b03a5922fd859a528cf6f60490f9831b9233", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4f66a023e7bcad0efa295d6354a3b03a5922fd859a528cf6f60490f9831b9233", kill_on_drop: false }`
[INFO] [stdout] 4f66a023e7bcad0efa295d6354a3b03a5922fd859a528cf6f60490f9831b9233
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+a609fb45efad59dfd459c76e50899be9f0583b5a" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1dabcf19dd3911f5f4a4074a1e47e107fde60228af7e5c7e29d265e1e15e53dd
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "1dabcf19dd3911f5f4a4074a1e47e107fde60228af7e5c7e29d265e1e15e53dd", kill_on_drop: false }`
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]     Checking strsim v0.8.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking textwrap v0.11.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking serde_json v1.0.61
[INFO] [stderr]    Compiling openssl-src v111.13.0+1.1.1i
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling curl-sys v0.4.39+curl-7.74.0
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]    Compiling thiserror-impl v1.0.23
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking thread_local v1.0.1
[INFO] [stderr]    Compiling openssl-sys v0.9.60
[INFO] [stderr]     Checking regex v1.4.2
[INFO] [stderr]     Checking clap v2.33.3
[INFO] [stderr]    Compiling hts-sys v1.10.3
[INFO] [stderr]     Checking bio-types v0.7.0
[INFO] [stderr]     Checking thiserror v1.0.23
[INFO] [stderr]     Checking rust-htslib v0.32.0
[INFO] [stderr]     Checking bam_histogram_qc v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 37s
[INFO] running `Command { std: "docker" "inspect" "1dabcf19dd3911f5f4a4074a1e47e107fde60228af7e5c7e29d265e1e15e53dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1dabcf19dd3911f5f4a4074a1e47e107fde60228af7e5c7e29d265e1e15e53dd", kill_on_drop: false }`
[INFO] [stdout] 1dabcf19dd3911f5f4a4074a1e47e107fde60228af7e5c7e29d265e1e15e53dd