[INFO] cloning repository https://github.com/chfi/rs-handlegraph [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/rs-handlegraph" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frs-handlegraph", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frs-handlegraph'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 633f082455f113c51b74dca3b0371d4f38023f07 [INFO] checking chfi/rs-handlegraph against try#81275a1445c7502a974118e0c69b795ab60be991 for pr-80243 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frs-handlegraph" "/workspace/builds/worker-3/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/chfi/rs-handlegraph on toolchain 81275a1445c7502a974118e0c69b795ab60be991 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+81275a1445c7502a974118e0c69b795ab60be991" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/chfi/rs-handlegraph [INFO] finished tweaking git repo https://github.com/chfi/rs-handlegraph [INFO] tweaked toml for git repo https://github.com/chfi/rs-handlegraph written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate git repo https://github.com/chfi/rs-handlegraph already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+81275a1445c7502a974118e0c69b795ab60be991" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded succinct v0.5.2 [INFO] [stderr] Downloaded bytemuck_derive v1.0.0 [INFO] [stderr] Downloaded gfa v0.9.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+81275a1445c7502a974118e0c69b795ab60be991" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 765eedcd45be2b5b85050ea1d853667921451ad3053e4f7cfd4dcc01950b59ac [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "765eedcd45be2b5b85050ea1d853667921451ad3053e4f7cfd4dcc01950b59ac", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "765eedcd45be2b5b85050ea1d853667921451ad3053e4f7cfd4dcc01950b59ac", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "765eedcd45be2b5b85050ea1d853667921451ad3053e4f7cfd4dcc01950b59ac", kill_on_drop: false }` [INFO] [stdout] 765eedcd45be2b5b85050ea1d853667921451ad3053e4f7cfd4dcc01950b59ac [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:b8eeb62f26c39b23691079a6cb6de528d8e88b4d71a8f6b1d30f8ba7d9c16de9" "/opt/rustwide/cargo-home/bin/cargo" "+81275a1445c7502a974118e0c69b795ab60be991" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 314cd04033e60fec216ee9a7dad5d9ee8ee2f3bc2083363edbecab27b5179adc [INFO] running `Command { std: "docker" "start" "-a" "314cd04033e60fec216ee9a7dad5d9ee8ee2f3bc2083363edbecab27b5179adc", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling libc v0.2.78 [INFO] [stderr] Compiling const_fn v0.4.3 [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling syn v1.0.38 [INFO] [stderr] Compiling lexical-core v0.7.4 [INFO] [stderr] Checking regex-syntax v0.6.18 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Checking arrayvec v0.5.1 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Checking static_assertions v1.1.0 [INFO] [stderr] Checking ppv-lite86 v0.2.9 [INFO] [stderr] Compiling anyhow v1.0.35 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] 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Checking gfa v0.9.0 [INFO] [stderr] Checking handlegraph v0.6.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `Receiver` [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:5:25 [INFO] [stdout] | [INFO] [stdout] 5 | use crossbeam_channel::{Receiver, Sender}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Direction`, `Edge`, `NodeId`, `handlegraph::*`, `mutablehandlegraph::*` [INFO] [stdout] --> src/algorithm.rs:2:14 [INFO] [stdout] | [INFO] [stdout] 2 | handle::{Direction, Edge, Handle, NodeId}, [INFO] [stdout] | ^^^^^^^^^ ^^^^ ^^^^^^ [INFO] [stdout] 3 | handlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] 4 | mutablehandlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::packedgraph::paths::StepPtr` [INFO] [stdout] --> src/algorithm.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::packedgraph::paths::StepPtr; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `FnvHashMap`, `FnvHashSet` [INFO] [stdout] --> src/algorithm.rs:11:11 [INFO] [stdout] | [INFO] [stdout] 11 | use fnv::{FnvHashMap, FnvHashSet}; [INFO] [stdout] | ^^^^^^^^^^ ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::packedgraph::paths::StepPtr` [INFO] [stdout] --> src/algorithm/unchop.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::packedgraph::paths::StepPtr; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `FnvHashSet` [INFO] [stdout] --> src/algorithm/unchop.rs:11:23 [INFO] [stdout] | [INFO] [stdout] 11 | use fnv::{FnvHashMap, FnvHashSet}; [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Edge`, `Handle`, `mutablehandlegraph::*` [INFO] [stdout] --> src/consensus.rs:2:14 [INFO] [stdout] | [INFO] [stdout] 2 | handle::{Edge, Handle, NodeId}, [INFO] [stdout] | ^^^^ ^^^^^^ [INFO] [stdout] 3 | handlegraph::*, [INFO] [stdout] 4 | mutablehandlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Receiver` [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:5:25 [INFO] [stdout] | [INFO] [stdout] 5 | use crossbeam_channel::{Receiver, Sender}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Direction`, `Edge`, `NodeId`, `handlegraph::*`, `mutablehandlegraph::*` [INFO] [stdout] --> src/algorithm.rs:2:14 [INFO] [stdout] | [INFO] [stdout] 2 | handle::{Direction, Edge, Handle, NodeId}, [INFO] [stdout] | ^^^^^^^^^ ^^^^ ^^^^^^ [INFO] [stdout] 3 | handlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] 4 | mutablehandlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::packedgraph::paths::StepPtr` [INFO] [stdout] --> src/algorithm.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::packedgraph::paths::StepPtr; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `FnvHashMap`, `FnvHashSet` [INFO] [stdout] --> src/algorithm.rs:11:11 [INFO] [stdout] | [INFO] [stdout] 11 | use fnv::{FnvHashMap, FnvHashSet}; [INFO] [stdout] | ^^^^^^^^^^ ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::packedgraph::paths::StepPtr` [INFO] [stdout] --> src/algorithm/unchop.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::packedgraph::paths::StepPtr; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `FnvHashSet` [INFO] [stdout] --> src/algorithm/unchop.rs:11:23 [INFO] [stdout] | [INFO] [stdout] 11 | use fnv::{FnvHashMap, FnvHashSet}; [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `Edge`, `Handle`, `mutablehandlegraph::*` [INFO] [stdout] --> src/consensus.rs:2:14 [INFO] [stdout] | [INFO] [stdout] 2 | handle::{Edge, Handle, NodeId}, [INFO] [stdout] | ^^^^ ^^^^^^ [INFO] [stdout] 3 | handlegraph::*, [INFO] [stdout] 4 | mutablehandlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/algorithm.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `pathhandlegraph` [INFO] [stdout] --> src/algorithm/unchop.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | pathhandlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/algorithm/unchop.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/consensus.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `updates` [INFO] [stdout] --> src/packedgraph/graph.rs:608:25 [INFO] [stdout] | [INFO] [stdout] 608 | let updates = f(path_id, s, path); [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_updates` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `step` [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:643:17 [INFO] [stdout] | [INFO] [stdout] 643 | let step = step_update.step(); [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_step` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `perfect` [INFO] [stdout] --> src/algorithm.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | let mut perfect = true; [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_perfect` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `graph` [INFO] [stdout] --> src/algorithm/unchop.rs:68:5 [INFO] [stdout] | [INFO] [stdout] 68 | graph: &mut PackedGraph, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_graph` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `handles` [INFO] [stdout] --> src/algorithm/unchop.rs:69:5 [INFO] [stdout] | [INFO] [stdout] 69 | handles: &[Handle], [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_handles` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `node_rank` [INFO] [stdout] --> src/algorithm/unchop.rs:80:9 [INFO] [stdout] | [INFO] [stdout] 80 | let mut node_rank: FnvHashMap = graph [INFO] [stdout] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_node_rank` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `path` [INFO] [stdout] --> src/consensus.rs:161:26 [INFO] [stdout] | [INFO] [stdout] 161 | let novel_seq_len = |path: PathId, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_path` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `begin` [INFO] [stdout] --> src/consensus.rs:162:26 [INFO] [stdout] | [INFO] [stdout] 162 | begin: StepPtr, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_begin` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/consensus.rs:163:26 [INFO] [stdout] | [INFO] [stdout] 163 | end: StepPtr, [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `seen_nodes` [INFO] [stdout] --> src/consensus.rs:164:26 [INFO] [stdout] | [INFO] [stdout] 164 | seen_nodes: &FnvHashSet, [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `graph` [INFO] [stdout] --> src/consensus.rs:165:26 [INFO] [stdout] | [INFO] [stdout] 165 | graph: &PackedGraph| [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_graph` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `path` [INFO] [stdout] --> src/consensus.rs:170:28 [INFO] [stdout] | [INFO] [stdout] 170 | let mark_seen_nodes = |path: PathId, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_path` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `begin` [INFO] [stdout] --> src/consensus.rs:171:28 [INFO] [stdout] | [INFO] [stdout] 171 | ... begin: StepPtr, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_begin` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/consensus.rs:172:28 [INFO] [stdout] | [INFO] [stdout] 172 | ... end: StepPtr, [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `seen_nodes` [INFO] [stdout] --> src/consensus.rs:173:28 [INFO] [stdout] | [INFO] [stdout] 173 | ... seen_nodes: &mut FnvHashSet, [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `graph` [INFO] [stdout] --> src/consensus.rs:174:28 [INFO] [stdout] | [INFO] [stdout] 174 | ... graph: &PackedGraph| { [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_graph` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `links` [INFO] [stdout] --> src/consensus.rs:179:10 [INFO] [stdout] | [INFO] [stdout] 179 | |links: &[LinkPath], seen_nodes: &mut FnvHashSet| { [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_links` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `seen_nodes` [INFO] [stdout] --> src/consensus.rs:179:30 [INFO] [stdout] | [INFO] [stdout] 179 | |links: &[LinkPath], seen_nodes: &mut FnvHashSet| { [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `link` [INFO] [stdout] --> src/consensus.rs:183:29 [INFO] [stdout] | [INFO] [stdout] 183 | let add_path_segment = |link: &LinkPath, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_link` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `begin` [INFO] [stdout] --> src/consensus.rs:184:29 [INFO] [stdout] | [INFO] [stdout] 184 | ... begin: StepPtr, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_begin` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/consensus.rs:185:29 [INFO] [stdout] | [INFO] [stdout] 185 | ... end: StepPtr, [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `cns` [INFO] [stdout] --> src/consensus.rs:186:29 [INFO] [stdout] | [INFO] [stdout] 186 | ... cns: &mut PackedGraph| { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_cns` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `consensus_path_ptrs` [INFO] [stdout] --> src/consensus.rs:102:9 [INFO] [stdout] | [INFO] [stdout] 102 | let consensus_path_ptrs: FnvHashMap = consensus_path_names [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_consensus_path_ptrs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `get_path_seq_len` [INFO] [stdout] --> src/consensus.rs:135:9 [INFO] [stdout] | [INFO] [stdout] 135 | let get_path_seq_len = [INFO] [stdout] | ^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_get_path_seq_len` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `get_path_seq` [INFO] [stdout] --> src/consensus.rs:148:9 [INFO] [stdout] | [INFO] [stdout] 148 | let get_path_seq = [INFO] [stdout] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_get_path_seq` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `novel_seq_len` [INFO] [stdout] --> src/consensus.rs:161:9 [INFO] [stdout] | [INFO] [stdout] 161 | let novel_seq_len = |path: PathId, [INFO] [stdout] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_novel_seq_len` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `mark_seen_nodes` [INFO] [stdout] --> src/consensus.rs:170:9 [INFO] [stdout] | [INFO] [stdout] 170 | let mark_seen_nodes = |path: PathId, [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_mark_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `compute_best_link` [INFO] [stdout] --> src/consensus.rs:178:9 [INFO] [stdout] | [INFO] [stdout] 178 | let compute_best_link = [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_compute_best_link` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `add_path_segment` [INFO] [stdout] --> src/consensus.rs:183:9 [INFO] [stdout] | [INFO] [stdout] 183 | let add_path_segment = |link: &LinkPath, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_add_path_segment` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `link` [INFO] [stdout] --> src/consensus.rs:191:13 [INFO] [stdout] | [INFO] [stdout] 191 | let mut link: LinkPath; [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_link` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `step` [INFO] [stdout] --> src/consensus.rs:198:13 [INFO] [stdout] | [INFO] [stdout] 198 | for step in path.steps() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_step` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `consensus_jump_max` [INFO] [stdout] --> src/consensus.rs:92:5 [INFO] [stdout] | [INFO] [stdout] 92 | consensus_jump_max: usize, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_consensus_jump_max` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `base` [INFO] [stdout] --> src/consensus.rs:93:5 [INFO] [stdout] | [INFO] [stdout] 93 | base: Vec, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_base` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/algorithm.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | let mut perfect = true; [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/algorithm.rs:29:13 [INFO] [stdout] | [INFO] [stdout] 29 | let mut next_step = if step_is_rev { [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/algorithm/unchop.rs:80:9 [INFO] [stdout] | [INFO] [stdout] 80 | let mut node_rank: FnvHashMap = graph [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/consensus.rs:95:9 [INFO] [stdout] | [INFO] [stdout] 95 | let mut res_graph = PackedGraph::default(); [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/consensus.rs:195:13 [INFO] [stdout] | [INFO] [stdout] 195 | let mut last_seen_consensus: Option = None; [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/consensus.rs:196:13 [INFO] [stdout] | [INFO] [stdout] 196 | let mut on_consensus = false; [INFO] [stdout] | ----^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `with_width` [INFO] [stdout] --> src/packedgraph/nodes.rs:78:19 [INFO] [stdout] | [INFO] [stdout] 78 | pub(crate) fn with_width(width: usize) -> Self { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `new_with_width` [INFO] [stdout] --> src/packedgraph/paths/properties.rs:44:19 [INFO] [stdout] | [INFO] [stdout] 44 | pub(super) fn new_with_width(width: usize) -> Self { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `concat_nodes` [INFO] [stdout] --> src/algorithm/unchop.rs:23:4 [INFO] [stdout] | [INFO] [stdout] 23 | fn concat_nodes(graph: &mut PackedGraph, handles: &[Handle]) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `combine_handles` [INFO] [stdout] --> src/algorithm/unchop.rs:67:4 [INFO] [stdout] | [INFO] [stdout] 67 | fn combine_handles( [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:527:9 [INFO] [stdout] | [INFO] [stdout] 527 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:562:13 [INFO] [stdout] | [INFO] [stdout] 562 | / sender.send(( [INFO] [stdout] 563 | | self.path_id, [INFO] [stdout] 564 | | StepUpdate::Insert { [INFO] [stdout] 565 | | handle, [INFO] [stdout] 566 | | step: StepPtr::from_one_based(cur_ptr), [INFO] [stdout] 567 | | }, [INFO] [stdout] 568 | | )); [INFO] [stdout] | |_______________^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:613:9 [INFO] [stdout] | [INFO] [stdout] 613 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:632:9 [INFO] [stdout] | [INFO] [stdout] 632 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:644:13 [INFO] [stdout] | [INFO] [stdout] 644 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:681:17 [INFO] [stdout] | [INFO] [stdout] 681 | / sender.send(( [INFO] [stdout] 682 | | self.path_id, [INFO] [stdout] 683 | | StepUpdate::Remove { [INFO] [stdout] 684 | | step: ptr, [INFO] [stdout] 685 | | handle: step.handle, [INFO] [stdout] 686 | | }, [INFO] [stdout] 687 | | )); [INFO] [stdout] | |___________________^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:709:13 [INFO] [stdout] | [INFO] [stdout] 709 | sender.send((self.path_id, update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:717:13 [INFO] [stdout] | [INFO] [stdout] 717 | sender.send((self.path_id, update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:749:9 [INFO] [stdout] | [INFO] [stdout] 749 | sender.send((self.path_id, StepUpdate::Remove { handle, step })); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:751:9 [INFO] [stdout] | [INFO] [stdout] 751 | / sender.send(( [INFO] [stdout] 752 | | self.path_id, [INFO] [stdout] 753 | | StepUpdate::Insert { [INFO] [stdout] 754 | | handle: handle.flip(), [INFO] [stdout] 755 | | step, [INFO] [stdout] 756 | | }, [INFO] [stdout] 757 | | )); [INFO] [stdout] | |___________^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/algorithm.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `pathhandlegraph` [INFO] [stdout] --> src/algorithm/unchop.rs:5:5 [INFO] [stdout] | [INFO] [stdout] 5 | pathhandlegraph::*, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/algorithm/unchop.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rayon::prelude` [INFO] [stdout] --> src/consensus.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use rayon::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `updates` [INFO] [stdout] --> src/packedgraph/graph.rs:608:25 [INFO] [stdout] | [INFO] [stdout] 608 | let updates = f(path_id, s, path); [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_updates` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `step` [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:643:17 [INFO] [stdout] | [INFO] [stdout] 643 | let step = step_update.step(); [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_step` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `perfect` [INFO] [stdout] --> src/algorithm.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | let mut perfect = true; [INFO] [stdout] | ^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_perfect` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `graph` [INFO] [stdout] --> src/algorithm/unchop.rs:68:5 [INFO] [stdout] | [INFO] [stdout] 68 | graph: &mut PackedGraph, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_graph` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `handles` [INFO] [stdout] --> src/algorithm/unchop.rs:69:5 [INFO] [stdout] | [INFO] [stdout] 69 | handles: &[Handle], [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_handles` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `node_rank` [INFO] [stdout] --> src/algorithm/unchop.rs:80:9 [INFO] [stdout] | [INFO] [stdout] 80 | let mut node_rank: FnvHashMap = graph [INFO] [stdout] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_node_rank` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `path` [INFO] [stdout] --> src/consensus.rs:161:26 [INFO] [stdout] | [INFO] [stdout] 161 | let novel_seq_len = |path: PathId, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_path` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `begin` [INFO] [stdout] --> src/consensus.rs:162:26 [INFO] [stdout] | [INFO] [stdout] 162 | begin: StepPtr, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_begin` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/consensus.rs:163:26 [INFO] [stdout] | [INFO] [stdout] 163 | end: StepPtr, [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `seen_nodes` [INFO] [stdout] --> src/consensus.rs:164:26 [INFO] [stdout] | [INFO] [stdout] 164 | seen_nodes: &FnvHashSet, [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `graph` [INFO] [stdout] --> src/consensus.rs:165:26 [INFO] [stdout] | [INFO] [stdout] 165 | graph: &PackedGraph| [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_graph` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `path` [INFO] [stdout] --> src/consensus.rs:170:28 [INFO] [stdout] | [INFO] [stdout] 170 | let mark_seen_nodes = |path: PathId, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_path` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `begin` [INFO] [stdout] --> src/consensus.rs:171:28 [INFO] [stdout] | [INFO] [stdout] 171 | ... begin: StepPtr, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_begin` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/consensus.rs:172:28 [INFO] [stdout] | [INFO] [stdout] 172 | ... end: StepPtr, [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `seen_nodes` [INFO] [stdout] --> src/consensus.rs:173:28 [INFO] [stdout] | [INFO] [stdout] 173 | ... seen_nodes: &mut FnvHashSet, [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 64 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `graph` [INFO] [stdout] --> src/consensus.rs:174:28 [INFO] [stdout] | [INFO] [stdout] 174 | ... graph: &PackedGraph| { [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_graph` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `links` [INFO] [stdout] --> src/consensus.rs:179:10 [INFO] [stdout] | [INFO] [stdout] 179 | |links: &[LinkPath], seen_nodes: &mut FnvHashSet| { [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_links` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `seen_nodes` [INFO] [stdout] --> src/consensus.rs:179:30 [INFO] [stdout] | [INFO] [stdout] 179 | |links: &[LinkPath], seen_nodes: &mut FnvHashSet| { [INFO] [stdout] | ^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `link` [INFO] [stdout] --> src/consensus.rs:183:29 [INFO] [stdout] | [INFO] [stdout] 183 | let add_path_segment = |link: &LinkPath, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_link` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `begin` [INFO] [stdout] --> src/consensus.rs:184:29 [INFO] [stdout] | [INFO] [stdout] 184 | ... begin: StepPtr, [INFO] [stdout] | ^^^^^ help: if this is intentional, prefix it with an underscore: `_begin` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `end` [INFO] [stdout] --> src/consensus.rs:185:29 [INFO] [stdout] | [INFO] [stdout] 185 | ... end: StepPtr, [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_end` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `cns` [INFO] [stdout] --> src/consensus.rs:186:29 [INFO] [stdout] | [INFO] [stdout] 186 | ... cns: &mut PackedGraph| { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_cns` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `consensus_path_ptrs` [INFO] [stdout] --> src/consensus.rs:102:9 [INFO] [stdout] | [INFO] [stdout] 102 | let consensus_path_ptrs: FnvHashMap = consensus_path_names [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_consensus_path_ptrs` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `get_path_seq_len` [INFO] [stdout] --> src/consensus.rs:135:9 [INFO] [stdout] | [INFO] [stdout] 135 | let get_path_seq_len = [INFO] [stdout] | ^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_get_path_seq_len` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `get_path_seq` [INFO] [stdout] --> src/consensus.rs:148:9 [INFO] [stdout] | [INFO] [stdout] 148 | let get_path_seq = [INFO] [stdout] | ^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_get_path_seq` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `novel_seq_len` [INFO] [stdout] --> src/consensus.rs:161:9 [INFO] [stdout] | [INFO] [stdout] 161 | let novel_seq_len = |path: PathId, [INFO] [stdout] | ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_novel_seq_len` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `mark_seen_nodes` [INFO] [stdout] --> src/consensus.rs:170:9 [INFO] [stdout] | [INFO] [stdout] 170 | let mark_seen_nodes = |path: PathId, [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_mark_seen_nodes` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `compute_best_link` [INFO] [stdout] --> src/consensus.rs:178:9 [INFO] [stdout] | [INFO] [stdout] 178 | let compute_best_link = [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_compute_best_link` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `add_path_segment` [INFO] [stdout] --> src/consensus.rs:183:9 [INFO] [stdout] | [INFO] [stdout] 183 | let add_path_segment = |link: &LinkPath, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_add_path_segment` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `link` [INFO] [stdout] --> src/consensus.rs:191:13 [INFO] [stdout] | [INFO] [stdout] 191 | let mut link: LinkPath; [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_link` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `step` [INFO] [stdout] --> src/consensus.rs:198:13 [INFO] [stdout] | [INFO] [stdout] 198 | for step in path.steps() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_step` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `consensus_jump_max` [INFO] [stdout] --> src/consensus.rs:92:5 [INFO] [stdout] | [INFO] [stdout] 92 | consensus_jump_max: usize, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_consensus_jump_max` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `base` [INFO] [stdout] --> src/consensus.rs:93:5 [INFO] [stdout] | [INFO] [stdout] 93 | base: Vec, [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_base` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `HashGraph`, `NodeId`, `StepIx`, `Step` [INFO] [stdout] --> tests/gfa.rs:2:39 [INFO] [stdout] | [INFO] [stdout] 2 | handle::{Direction, Edge, Handle, NodeId}, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 5 | path::{Step, StepIx}, [INFO] [stdout] | ^^^^ ^^^^^^ [INFO] [stdout] 6 | HashGraph, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/algorithm.rs:22:9 [INFO] [stdout] | [INFO] [stdout] 22 | let mut perfect = true; [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/algorithm.rs:29:13 [INFO] [stdout] | [INFO] [stdout] 29 | let mut next_step = if step_is_rev { [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/algorithm/unchop.rs:80:9 [INFO] [stdout] | [INFO] [stdout] 80 | let mut node_rank: FnvHashMap = graph [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/consensus.rs:95:9 [INFO] [stdout] | [INFO] [stdout] 95 | let mut res_graph = PackedGraph::default(); [INFO] [stdout] | ----^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/consensus.rs:195:13 [INFO] [stdout] | [INFO] [stdout] 195 | let mut last_seen_consensus: Option = None; [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/consensus.rs:196:13 [INFO] [stdout] | [INFO] [stdout] 196 | let mut on_consensus = false; [INFO] [stdout] | ----^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `with_width` [INFO] [stdout] --> src/packedgraph/nodes.rs:78:19 [INFO] [stdout] | [INFO] [stdout] 78 | pub(crate) fn with_width(width: usize) -> Self { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `new_with_width` [INFO] [stdout] --> src/packedgraph/paths/properties.rs:44:19 [INFO] [stdout] | [INFO] [stdout] 44 | pub(super) fn new_with_width(width: usize) -> Self { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `concat_nodes` [INFO] [stdout] --> src/algorithm/unchop.rs:23:4 [INFO] [stdout] | [INFO] [stdout] 23 | fn concat_nodes(graph: &mut PackedGraph, handles: &[Handle]) -> Option { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `combine_handles` [INFO] [stdout] --> src/algorithm/unchop.rs:67:4 [INFO] [stdout] | [INFO] [stdout] 67 | fn combine_handles( [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:527:9 [INFO] [stdout] | [INFO] [stdout] 527 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:562:13 [INFO] [stdout] | [INFO] [stdout] 562 | / sender.send(( [INFO] [stdout] 563 | | self.path_id, [INFO] [stdout] 564 | | StepUpdate::Insert { [INFO] [stdout] 565 | | handle, [INFO] [stdout] 566 | | step: StepPtr::from_one_based(cur_ptr), [INFO] [stdout] 567 | | }, [INFO] [stdout] 568 | | )); [INFO] [stdout] | |_______________^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:613:9 [INFO] [stdout] | [INFO] [stdout] 613 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:632:9 [INFO] [stdout] | [INFO] [stdout] 632 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:644:13 [INFO] [stdout] | [INFO] [stdout] 644 | sender.send((self.path_id, step_update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:681:17 [INFO] [stdout] | [INFO] [stdout] 681 | / sender.send(( [INFO] [stdout] 682 | | self.path_id, [INFO] [stdout] 683 | | StepUpdate::Remove { [INFO] [stdout] 684 | | step: ptr, [INFO] [stdout] 685 | | handle: step.handle, [INFO] [stdout] 686 | | }, [INFO] [stdout] 687 | | )); [INFO] [stdout] | |___________________^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:709:13 [INFO] [stdout] | [INFO] [stdout] 709 | sender.send((self.path_id, update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:717:13 [INFO] [stdout] | [INFO] [stdout] 717 | sender.send((self.path_id, update)); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:749:9 [INFO] [stdout] | [INFO] [stdout] 749 | sender.send((self.path_id, StepUpdate::Remove { handle, step })); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/packedgraph/paths/packedpath.rs:751:9 [INFO] [stdout] | [INFO] [stdout] 751 | / sender.send(( [INFO] [stdout] 752 | | self.path_id, [INFO] [stdout] 753 | | StepUpdate::Insert { [INFO] [stdout] 754 | | handle: handle.flip(), [INFO] [stdout] 755 | | step, [INFO] [stdout] 756 | | }, [INFO] [stdout] 757 | | )); [INFO] [stdout] | |___________^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 64 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 53.47s [INFO] running `Command { std: "docker" "inspect" "314cd04033e60fec216ee9a7dad5d9ee8ee2f3bc2083363edbecab27b5179adc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "314cd04033e60fec216ee9a7dad5d9ee8ee2f3bc2083363edbecab27b5179adc", kill_on_drop: false }` [INFO] [stdout] 314cd04033e60fec216ee9a7dad5d9ee8ee2f3bc2083363edbecab27b5179adc