[INFO] cloning repository https://github.com/guertinlab/fqdedup
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/guertinlab/fqdedup" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Ffqdedup", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Ffqdedup'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ea20cbff76a2b3eb2d838900c46fc0bafd8fe1ba
[INFO] checking guertinlab/fqdedup against master#c9228570668803e3e6402770d55f23a12c9ae686 for pr-79472
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Ffqdedup" "/workspace/builds/worker-12/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-12/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/guertinlab/fqdedup on toolchain c9228570668803e3e6402770d55f23a12c9ae686
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+c9228570668803e3e6402770d55f23a12c9ae686" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/guertinlab/fqdedup
[INFO] finished tweaking git repo https://github.com/guertinlab/fqdedup
[INFO] tweaked toml for git repo https://github.com/guertinlab/fqdedup written to /workspace/builds/worker-12/source/Cargo.toml
[INFO] crate git repo https://github.com/guertinlab/fqdedup already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+c9228570668803e3e6402770d55f23a12c9ae686" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+c9228570668803e3e6402770d55f23a12c9ae686" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 87abdf1e1110870223900f8d6ca8648baea5274dab20977b870b1ad967fb4acf
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "87abdf1e1110870223900f8d6ca8648baea5274dab20977b870b1ad967fb4acf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "87abdf1e1110870223900f8d6ca8648baea5274dab20977b870b1ad967fb4acf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "87abdf1e1110870223900f8d6ca8648baea5274dab20977b870b1ad967fb4acf", kill_on_drop: false }`
[INFO] [stdout] 87abdf1e1110870223900f8d6ca8648baea5274dab20977b870b1ad967fb4acf
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+c9228570668803e3e6402770d55f23a12c9ae686" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e27143c2e3fbec381d4134ab0923b4668d160bf9e4d3580a9556728e238a59d2
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "e27143c2e3fbec381d4134ab0923b4668d160bf9e4d3580a9556728e238a59d2", kill_on_drop: false }`
[INFO] [stderr]    Compiling unicode-xid v0.0.4
[INFO] [stderr]    Compiling quote v0.3.15
[INFO] [stderr]     Checking lazy_static v0.2.11
[INFO] [stderr]     Checking strsim v0.6.0
[INFO] [stderr]     Checking serde v1.0.25
[INFO] [stderr]     Checking memchr v2.0.1
[INFO] [stderr]     Checking patricia_tree v0.1.1
[INFO] [stderr]    Compiling synom v0.11.3
[INFO] [stderr]     Checking aho-corasick v0.6.4
[INFO] [stderr]    Compiling syn v0.11.11
[INFO] [stderr]     Checking regex v0.2.3
[INFO] [stderr]    Compiling serde_derive_internals v0.18.1
[INFO] [stderr]    Compiling serde_derive v1.0.25
[INFO] [stderr]     Checking docopt v0.8.1
[INFO] [stderr]     Checking fqdedup v1.0.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/main.rs:39:45
[INFO] [stdout]    |
[INFO] [stdout] 39 |             panic!(format!("Error: {}", err.description()));
[INFO] [stdout]    |                                             ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated associated function `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/main.rs:39:45
[INFO] [stdout]    |
[INFO] [stdout] 39 |             panic!(format!("Error: {}", err.description()));
[INFO] [stdout]    |                                             ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:136:21
[INFO] [stdout]     |
[INFO] [stdout] 136 |                 let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap();
[INFO] [stdout]     |                     ----^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:148:17
[INFO] [stdout]     |
[INFO] [stdout] 148 |             let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap();
[INFO] [stdout]     |                 ----^^^^^^
[INFO] [stdout]     |                 |
[INFO] [stdout]     |                 help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:136:21
[INFO] [stdout]     |
[INFO] [stdout] 136 |                 let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap();
[INFO] [stdout]     |                     ----^^^^^^
[INFO] [stdout]     |                     |
[INFO] [stdout]     |                     help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:148:17
[INFO] [stdout]     |
[INFO] [stdout] 148 |             let mut output = File::create(output_filename(&args.arg_filename, args.flag_output)).unwrap();
[INFO] [stdout]     |                 ----^^^^^^
[INFO] [stdout]     |                 |
[INFO] [stdout]     |                 help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 22.02s
[INFO] running `Command { std: "docker" "inspect" "e27143c2e3fbec381d4134ab0923b4668d160bf9e4d3580a9556728e238a59d2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e27143c2e3fbec381d4134ab0923b4668d160bf9e4d3580a9556728e238a59d2", kill_on_drop: false }`
[INFO] [stdout] e27143c2e3fbec381d4134ab0923b4668d160bf9e4d3580a9556728e238a59d2