[INFO] cloning repository https://github.com/chfi/rs-gfa-utils [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/rs-gfa-utils" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frs-gfa-utils", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frs-gfa-utils'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 91ec5c4e1af1424789410afc276933357562ddf4 [INFO] checking chfi/rs-gfa-utils against try#b2f80f6008cdafc35b4472bd46afa16cc6b0cd63 for pr-79470 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frs-gfa-utils" "/workspace/builds/worker-5/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/chfi/rs-gfa-utils on toolchain b2f80f6008cdafc35b4472bd46afa16cc6b0cd63 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b2f80f6008cdafc35b4472bd46afa16cc6b0cd63" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/chfi/rs-gfa-utils [INFO] finished tweaking git repo https://github.com/chfi/rs-gfa-utils [INFO] tweaked toml for git repo https://github.com/chfi/rs-gfa-utils written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate git repo https://github.com/chfi/rs-gfa-utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b2f80f6008cdafc35b4472bd46afa16cc6b0cd63" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded clap v2.33.1 [INFO] [stderr] Downloaded structopt-derive v0.4.8 [INFO] [stderr] Downloaded indicatif v0.15.0 [INFO] [stderr] Downloaded bit-vec v0.6.2 [INFO] [stderr] Downloaded bio-types v0.7.0 [INFO] [stderr] Downloaded terminal_size v0.1.13 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded ndarray v0.13.1 [INFO] [stderr] Downloaded snafu-derive v0.6.9 [INFO] [stderr] Downloaded snafu v0.6.9 [INFO] [stderr] Downloaded derive-new v0.5.8 [INFO] [stderr] Downloaded enum-map v0.6.3 [INFO] [stderr] Downloaded bv v0.11.1 [INFO] [stderr] Downloaded bytecount v0.6.0 [INFO] [stderr] Downloaded statrs v0.12.0 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded strum v0.18.0 [INFO] [stderr] Downloaded strum_macros v0.18.0 [INFO] [stderr] Downloaded triple_accel v0.3.4 [INFO] [stderr] Downloaded bio v0.32.0 [INFO] [stderr] Downloaded console v0.12.0 [INFO] [stderr] Downloaded number_prefix v0.3.0 [INFO] [stderr] Downloaded getset v0.0.9 [INFO] [stderr] Downloaded rayon v1.4.1 [INFO] [stderr] Downloaded aho-corasick v0.7.12 [INFO] [stderr] Downloaded rayon-core v1.8.1 [INFO] [stderr] Downloaded serde_derive v1.0.114 [INFO] [stderr] Downloaded structopt v0.3.15 [INFO] [stderr] Downloaded three-edge-connected v0.1.0 [INFO] [stderr] Downloaded handlegraph v0.5.0 [INFO] [stderr] Downloaded proc-macro-error-attr v1.0.3 [INFO] [stderr] Downloaded proc-macro-error v1.0.3 [INFO] [stderr] Downloaded syn v1.0.33 [INFO] [stderr] Downloaded saboten v0.0.2 [INFO] [stderr] Downloaded gfa v0.8.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+b2f80f6008cdafc35b4472bd46afa16cc6b0cd63" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 93015ae0dd2786b6243a4066594a4a6c4b7da68d69d83a7ff5a370f9a13eb277 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "93015ae0dd2786b6243a4066594a4a6c4b7da68d69d83a7ff5a370f9a13eb277", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "93015ae0dd2786b6243a4066594a4a6c4b7da68d69d83a7ff5a370f9a13eb277", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "93015ae0dd2786b6243a4066594a4a6c4b7da68d69d83a7ff5a370f9a13eb277", kill_on_drop: false }` [INFO] [stdout] 93015ae0dd2786b6243a4066594a4a6c4b7da68d69d83a7ff5a370f9a13eb277 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+b2f80f6008cdafc35b4472bd46afa16cc6b0cd63" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4660da553d6a44c88ed120a84b142ab722b521a75410e7a3285beea06a313971 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4660da553d6a44c88ed120a84b142ab722b521a75410e7a3285beea06a313971", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.33 [INFO] [stderr] Compiling libc v0.2.71 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Checking regex-syntax v0.6.18 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Compiling lexical-core v0.7.4 [INFO] [stderr] Checking static_assertions v1.1.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling serde_json v1.0.57 [INFO] [stderr] Checking either v1.5.3 [INFO] [stderr] Checking quick-error v1.2.3 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Compiling bio v0.32.0 [INFO] [stderr] Checking strum v0.18.0 [INFO] [stderr] Checking triple_accel v0.3.4 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rayon v1.4.1 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.3 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling proc-macro-error v1.0.3 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking humantime v1.3.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling proc-macro2 v1.0.18 [INFO] [stderr] Checking log v0.4.11 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking aho-corasick v0.7.12 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking crossbeam-channel v0.4.4 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking terminal_size v0.1.13 [INFO] [stderr] Checking termios v0.3.2 [INFO] [stderr] Checking time v0.1.44 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rayon-core v1.8.1 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking ordered-float v1.1.0 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking chrono v0.4.19 [INFO] [stderr] Checking regex v1.3.9 [INFO] [stderr] Checking statrs v0.12.0 [INFO] [stderr] Checking console v0.12.0 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking pretty_env_logger v0.4.0 [INFO] [stderr] Checking indicatif v0.15.0 [INFO] [stderr] Compiling syn-mid v0.5.0 [INFO] [stderr] Compiling bytemuck_derive v1.0.0 [INFO] [stderr] Compiling snafu-derive v0.6.9 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling enum-map-derive v0.4.3 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Checking enum-map v0.6.3 [INFO] [stderr] Compiling structopt-derive v0.4.8 [INFO] [stderr] Checking bytemuck v1.4.1 [INFO] [stderr] Checking snafu v0.6.9 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking bstr v0.2.13 [INFO] [stderr] Checking bio-types v0.7.0 [INFO] [stderr] Checking multimap v0.8.2 [INFO] [stderr] Checking clap v2.33.1 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Checking gfa v0.8.0 [INFO] [stderr] Checking structopt v0.3.15 [INFO] [stderr] Checking three-edge-connected v0.1.0 [INFO] [stderr] Checking saboten v0.0.2 [INFO] [stderr] Checking handlegraph v0.5.0 [INFO] [stderr] Checking gfautil v0.3.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 17s [INFO] running `Command { std: "docker" "inspect" "4660da553d6a44c88ed120a84b142ab722b521a75410e7a3285beea06a313971", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4660da553d6a44c88ed120a84b142ab722b521a75410e7a3285beea06a313971", kill_on_drop: false }` [INFO] [stdout] 4660da553d6a44c88ed120a84b142ab722b521a75410e7a3285beea06a313971