[INFO] cloning repository https://github.com/brainstorm/htsget-indexer
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/brainstorm/htsget-indexer" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-indexer", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-indexer'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 182650b6518cdeefad31ab1ca4aa5cb1666e0ab2
[INFO] checking brainstorm/htsget-indexer against master#b7ebc6b0c1ba3c27ebb17c0b496ece778ef11e18 for pr-79470
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-indexer" "/workspace/builds/worker-6/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/brainstorm/htsget-indexer on toolchain b7ebc6b0c1ba3c27ebb17c0b496ece778ef11e18
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b7ebc6b0c1ba3c27ebb17c0b496ece778ef11e18" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/brainstorm/htsget-indexer
[INFO] finished tweaking git repo https://github.com/brainstorm/htsget-indexer
[INFO] tweaked toml for git repo https://github.com/brainstorm/htsget-indexer written to /workspace/builds/worker-6/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b7ebc6b0c1ba3c27ebb17c0b496ece778ef11e18" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b7ebc6b0c1ba3c27ebb17c0b496ece778ef11e18" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+b7ebc6b0c1ba3c27ebb17c0b496ece778ef11e18" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d7522050e06af63c04f960e26a14c6083a4f4c6e4bb66b2bcd2e41d20378d70e
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "d7522050e06af63c04f960e26a14c6083a4f4c6e4bb66b2bcd2e41d20378d70e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d7522050e06af63c04f960e26a14c6083a4f4c6e4bb66b2bcd2e41d20378d70e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d7522050e06af63c04f960e26a14c6083a4f4c6e4bb66b2bcd2e41d20378d70e", kill_on_drop: false }`
[INFO] [stdout] d7522050e06af63c04f960e26a14c6083a4f4c6e4bb66b2bcd2e41d20378d70e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+b7ebc6b0c1ba3c27ebb17c0b496ece778ef11e18" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] aafe9a33229d49804b949e93a6e76fe11da84133f8758cc3e72674452115ea78
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "aafe9a33229d49804b949e93a6e76fe11da84133f8758cc3e72674452115ea78", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.81
[INFO] [stderr]    Compiling cc v1.0.66
[INFO] [stderr]    Compiling memchr v2.3.4
[INFO] [stderr]    Compiling proc-macro2 v1.0.24
[INFO] [stderr]    Compiling unicode-xid v0.2.1
[INFO] [stderr]    Compiling pkg-config v0.3.19
[INFO] [stderr]    Compiling syn v1.0.54
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling version_check v0.1.5
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]    Compiling serde_derive v1.0.118
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling unicode-xid v0.1.0
[INFO] [stderr]    Compiling regex-syntax v0.6.21
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling serde v1.0.118
[INFO] [stderr]     Checking matches v0.1.8
[INFO] [stderr]    Compiling bindgen v0.51.1
[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]     Checking tinyvec_macros v0.1.0
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking adler v0.2.3
[INFO] [stderr]     Checking gimli v0.23.0
[INFO] [stderr]     Checking object v0.22.0
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]     Checking rustc-demangle v0.1.18
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]     Checking quick-error v1.2.3
[INFO] [stderr]    Compiling serde_json v1.0.60
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]    Compiling clang-sys v0.28.1
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]     Checking tinyvec v1.1.0
[INFO] [stderr]     Checking thread_local v1.0.1
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]     Checking itertools v0.8.2
[INFO] [stderr]     Checking form_urlencoded v1.0.0
[INFO] [stderr]    Compiling miniz_oxide v0.4.3
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking aho-corasick v0.7.15
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]     Checking unicode-normalization v0.1.16
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]    Compiling quote v1.0.7
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling cexpr v0.3.6
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling libz-sys v1.1.2
[INFO] [stderr]    Compiling lzma-sys v0.1.17
[INFO] [stderr]    Compiling bzip2-sys v0.1.9+1.0.8
[INFO] [stderr]     Checking idna v0.2.0
[INFO] [stderr]     Checking regex v1.4.2
[INFO] [stderr]     Checking addr2line v0.14.0
[INFO] [stderr]     Checking url v2.2.0
[INFO] [stderr]     Checking backtrace v0.3.55
[INFO] [stderr]    Compiling env_logger v0.6.2
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]     Checking snafu v0.5.0
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling snafu-derive v0.6.10
[INFO] [stderr]     Checking snafu v0.6.10
[INFO] [stderr]    Compiling rust-htslib v0.26.1
[INFO] [stderr]     Checking bio-types v0.7.0
[INFO] [stderr]     Checking htsget-indexer v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 40s
[INFO] running `Command { std: "docker" "inspect" "aafe9a33229d49804b949e93a6e76fe11da84133f8758cc3e72674452115ea78", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "aafe9a33229d49804b949e93a6e76fe11da84133f8758cc3e72674452115ea78", kill_on_drop: false }`
[INFO] [stdout] aafe9a33229d49804b949e93a6e76fe11da84133f8758cc3e72674452115ea78