[INFO] fetching crate hts-sys 1.11.1-fix1... [INFO] testing hts-sys-1.11.1-fix1 against try#eafdee2dfae8c2233b74f98b123308be7ccefcc6 for pr-79296 [INFO] extracting crate hts-sys 1.11.1-fix1 into /workspace/builds/worker-12/source [INFO] validating manifest of crates.io crate hts-sys 1.11.1-fix1 on toolchain eafdee2dfae8c2233b74f98b123308be7ccefcc6 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hts-sys 1.11.1-fix1 [INFO] finished tweaking crates.io crate hts-sys 1.11.1-fix1 [INFO] tweaked toml for crates.io crate hts-sys 1.11.1-fix1 written to /workspace/builds/worker-12/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: version requirement `0.4.36+curl-7.71.1` for dependency `curl-sys` includes semver metadata which will be ignored, removing the metadata is recommended to avoid confusion [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded libdeflate-sys v0.5.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded lzma-sys v0.1.17 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] cfbdf31c59ef80f4573a3b882de7a92791e9087606d14c6065b0b74612555286 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "cfbdf31c59ef80f4573a3b882de7a92791e9087606d14c6065b0b74612555286", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "cfbdf31c59ef80f4573a3b882de7a92791e9087606d14c6065b0b74612555286", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cfbdf31c59ef80f4573a3b882de7a92791e9087606d14c6065b0b74612555286", kill_on_drop: false }` [INFO] [stdout] cfbdf31c59ef80f4573a3b882de7a92791e9087606d14c6065b0b74612555286 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4cc6dae8f59ae9028c4faa87bcb4bacdd110b333c3f0c8b75b7ab18a22d4c1fd [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4cc6dae8f59ae9028c4faa87bcb4bacdd110b333c3f0c8b75b7ab18a22d4c1fd", kill_on_drop: false }` [INFO] [stderr] warning: version requirement `0.4.36+curl-7.71.1` for dependency `curl-sys` includes semver metadata which will be ignored, removing the metadata is recommended to avoid confusion [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling cc v1.0.65 [INFO] [stderr] Compiling openssl-src v111.12.0+1.1.1h [INFO] [stderr] Compiling openssl-sys v0.9.58 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.38+curl-7.73.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 21s [INFO] running `Command { std: "docker" "inspect" "4cc6dae8f59ae9028c4faa87bcb4bacdd110b333c3f0c8b75b7ab18a22d4c1fd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4cc6dae8f59ae9028c4faa87bcb4bacdd110b333c3f0c8b75b7ab18a22d4c1fd", kill_on_drop: false }` [INFO] [stdout] 4cc6dae8f59ae9028c4faa87bcb4bacdd110b333c3f0c8b75b7ab18a22d4c1fd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5e48062e012524db1dd2a031b8d3bb08323eb4067abd840b506f33cad0febec1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "5e48062e012524db1dd2a031b8d3bb08323eb4067abd840b506f33cad0febec1", kill_on_drop: false }` [INFO] [stderr] warning: version requirement `0.4.36+curl-7.71.1` for dependency `curl-sys` includes semver metadata which will be ignored, removing the metadata is recommended to avoid confusion [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 5.68s [INFO] running `Command { std: "docker" "inspect" "5e48062e012524db1dd2a031b8d3bb08323eb4067abd840b506f33cad0febec1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5e48062e012524db1dd2a031b8d3bb08323eb4067abd840b506f33cad0febec1", kill_on_drop: false }` [INFO] [stdout] 5e48062e012524db1dd2a031b8d3bb08323eb4067abd840b506f33cad0febec1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-12/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 1d8819ae58e69afef7e761c8f4cafb5594a056f1165e93ce8646a9fd7b724276 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "1d8819ae58e69afef7e761c8f4cafb5594a056f1165e93ce8646a9fd7b724276", kill_on_drop: false }` [INFO] [stderr] warning: version requirement `0.4.36+curl-7.71.1` for dependency `curl-sys` includes semver metadata which will be ignored, removing the metadata is recommended to avoid confusion [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.08s [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/hts_sys-49902cf1f29d750f [INFO] [stdout] running 76 tests [INFO] [stdout] test bindgen_test_layout__G_fpos64_t ... ok [INFO] [stdout] test bindgen_test_layout__G_fpos_t ... ok [INFO] [stdout] test bindgen_test_layout___WAIT_STATUS ... ok [INFO] [stdout] test bindgen_test_layout___fsid_t ... ok [INFO] [stdout] test bindgen_test_layout__bcf_sr_regions_t ... ok [INFO] [stdout] test bindgen_test_layout_aux_key_t ... ok [INFO] [stdout] test bindgen_test_layout_bam1_core_t ... ok [INFO] [stdout] test bindgen_test_layout_bam1_t ... ok [INFO] [stdout] test bindgen_test_layout_bam_pileup1_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf1_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_dec_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_fmt_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_idinfo_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_idpair_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_info_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_info_t__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_bcf_sr_t ... ok [INFO] [stdout] test bindgen_test_layout_div_t ... ok [INFO] [stdout] test bindgen_test_layout_drand48_data ... ok [INFO] [stdout] test bindgen_test_layout_fd_set ... ok [INFO] [stdout] test bindgen_test_layout_htsFile ... ok [INFO] [stdout] test bindgen_test_layout_htsFile__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_htsFormat ... ok [INFO] [stdout] test bindgen_test_layout_htsFormat__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_hts_itr_t ... ok [INFO] [stdout] test bindgen_test_layout_hts_itr_t__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_hts_opt__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_hts_pair64_max_t ... ok [INFO] [stdout] test bindgen_test_layout_htsThreadPool ... ok [INFO] [stdout] test bindgen_test_layout_hts_pair64_t ... ok [INFO] [stdout] test bindgen_test_layout___sigset_t ... ok [INFO] [stdout] test bindgen_test_layout___va_list_tag ... ok [INFO] [stdout] test bindgen_test_layout___mbstate_t__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout___mbstate_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_hrec_t ... ok [INFO] [stdout] test bindgen_test_layout_bcf_hdr_t ... ok [INFO] [stdout] test bindgen_test_layout_bam_pileup_cd ... ok [INFO] [stdout] test bindgen_test_layout_bcf_srs_t ... ok [INFO] [stdout] test bindgen_test_layout__IO_FILE ... ok [INFO] [stdout] test bindgen_test_layout_hts_opt ... ok [INFO] [stdout] test bindgen_test_layout_BGZF ... ok [INFO] [stdout] test bindgen_test_layout__IO_marker ... ok [INFO] [stdout] test bindgen_test_layout_probaln_par_t ... ok [INFO] [stdout] test bindgen_test_layout___pthread_internal_list ... ok [INFO] [stdout] test bindgen_test_layout_lldiv_t ... ok [INFO] [stdout] test bindgen_test_layout_ldiv_t ... ok [INFO] [stdout] test bindgen_test_layout_kstring_t ... ok [INFO] [stdout] test bindgen_test_layout_ks_tokaux_t ... ok [INFO] [stdout] test bindgen_test_layout___locale_struct ... ok [INFO] [stdout] test bindgen_test_layout_hts_pair_pos_t ... ok [INFO] [stdout] test bindgen_test_layout_hts_reglist_t ... ok [INFO] [stdout] test bindgen_test_layout_imaxdiv_t ... ok [INFO] [stdout] test bindgen_test_layout_kbitset_iter_t ... ok [INFO] [stdout] test bindgen_test_layout_kbitset_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_rwlock_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_rwlock_t__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_pthread_rwlockattr_t ... ok [INFO] [stdout] test bindgen_test_layout_random_data ... ok [INFO] [stdout] test bindgen_test_layout_sam_hdr_t ... ok [INFO] [stdout] test bindgen_test_layout_tbx_conf_t ... ok [INFO] [stdout] test bindgen_test_layout_tbx_t ... ok [INFO] [stdout] test bindgen_test_layout_timespec ... ok [INFO] [stdout] test bindgen_test_layout_timeval ... ok [INFO] [stdout] test bindgen_test_layout_variant_t ... ok [INFO] [stdout] test bindgen_test_layout_wait ... ok [INFO] [stdout] test bindgen_test_layout_wait__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_wait__bindgen_ty_2 ... ok [INFO] [stdout] test bindgen_test_layout_pthread_barrier_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_condattr_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_mutex_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_cond_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_attr_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_barrierattr_t ... ok [INFO] [stdout] test bindgen_test_layout_pthread_cond_t__bindgen_ty_1 ... ok [INFO] [stdout] test bindgen_test_layout_pthread_mutex_t___pthread_mutex_s ... ok [INFO] [stdout] test bindgen_test_layout_pthread_mutexattr_t ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 76 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests hts-sys [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "1d8819ae58e69afef7e761c8f4cafb5594a056f1165e93ce8646a9fd7b724276", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1d8819ae58e69afef7e761c8f4cafb5594a056f1165e93ce8646a9fd7b724276", kill_on_drop: false }` [INFO] [stdout] 1d8819ae58e69afef7e761c8f4cafb5594a056f1165e93ce8646a9fd7b724276