[INFO] fetching crate debruijn 0.3.2... [INFO] testing debruijn-0.3.2 against try#eafdee2dfae8c2233b74f98b123308be7ccefcc6 for pr-79296 [INFO] extracting crate debruijn 0.3.2 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate debruijn 0.3.2 on toolchain eafdee2dfae8c2233b74f98b123308be7ccefcc6 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate debruijn 0.3.2 [INFO] finished tweaking crates.io crate debruijn 0.3.2 [INFO] tweaked toml for crates.io crate debruijn 0.3.2 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded wyhash v0.4.2 [INFO] [stderr] Downloaded boomphf v0.5.8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2ece395abe9510790febf1f77fef81a18df0fee6e8f0c83c600466ccdb88c9c5 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "2ece395abe9510790febf1f77fef81a18df0fee6e8f0c83c600466ccdb88c9c5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2ece395abe9510790febf1f77fef81a18df0fee6e8f0c83c600466ccdb88c9c5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2ece395abe9510790febf1f77fef81a18df0fee6e8f0c83c600466ccdb88c9c5", kill_on_drop: false }` [INFO] [stdout] 2ece395abe9510790febf1f77fef81a18df0fee6e8f0c83c600466ccdb88c9c5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2f51fb7bed17632a640e099d82cbe307dff9b353c8a63de669b0462a2ab4d45d [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "2f51fb7bed17632a640e099d82cbe307dff9b353c8a63de669b0462a2ab4d45d", kill_on_drop: false }` [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling bit-vec v0.6.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.1 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-bigint v0.3.1 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling wyhash v0.4.2 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling crossbeam-epoch v0.9.1 [INFO] [stderr] Compiling crossbeam-channel v0.5.0 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling num-complex v0.3.1 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling num v0.3.1 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Compiling boomphf v0.5.8 [INFO] [stderr] Compiling debruijn v0.3.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 20.54s [INFO] running `Command { std: "docker" "inspect" "2f51fb7bed17632a640e099d82cbe307dff9b353c8a63de669b0462a2ab4d45d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2f51fb7bed17632a640e099d82cbe307dff9b353c8a63de669b0462a2ab4d45d", kill_on_drop: false }` [INFO] [stdout] 2f51fb7bed17632a640e099d82cbe307dff9b353c8a63de669b0462a2ab4d45d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ee85e658eb3f2f04a06bd2363f533e7d4f6c8b1fea077907e8bfa575ca1e3fea [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ee85e658eb3f2f04a06bd2363f533e7d4f6c8b1fea077907e8bfa575ca1e3fea", kill_on_drop: false }` [INFO] [stderr] Compiling rand_core v0.4.2 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling difference v2.0.0 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling pretty_assertions v0.5.1 [INFO] [stderr] Compiling rand v0.5.6 [INFO] [stderr] Compiling debruijn v0.3.2 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:586:18 [INFO] [stdout] | [INFO] [stdout] 586 | let s1 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v1), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:587:18 [INFO] [stdout] | [INFO] [stdout] 587 | let s2 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v2), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stdout] --> src/msp.rs:394:26 [INFO] [stdout] | [INFO] [stdout] 394 | let slices = super::simple_scan::<_, Kmer8>(k, &DnaSlice(&dna), &permutation, true); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 15.95s [INFO] running `Command { std: "docker" "inspect" "ee85e658eb3f2f04a06bd2363f533e7d4f6c8b1fea077907e8bfa575ca1e3fea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ee85e658eb3f2f04a06bd2363f533e7d4f6c8b1fea077907e8bfa575ca1e3fea", kill_on_drop: false }` [INFO] [stdout] ee85e658eb3f2f04a06bd2363f533e7d4f6c8b1fea077907e8bfa575ca1e3fea [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 793a3cb36ea9a6c8ab2ba4be2949be9d9113fd492af0143269d637ddc45124a4 [INFO] running `Command { std: "docker" "start" "-a" "793a3cb36ea9a6c8ab2ba4be2949be9d9113fd492af0143269d637ddc45124a4", kill_on_drop: false }` [INFO] [stderr] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stderr] --> src/msp.rs:586:18 [INFO] [stderr] | [INFO] [stderr] 586 | let s1 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v1), &permutation, true); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(deprecated)]` on by default [INFO] [stderr] [INFO] [stderr] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stderr] --> src/msp.rs:587:18 [INFO] [stderr] | [INFO] [stderr] 587 | let s2 = super::simple_scan::<_, Kmer5>(35, &DnaSlice(&mut &v2), &permutation, true); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: use of deprecated function `msp::simple_scan`: Please use the `Scanner` type instead [INFO] [stderr] --> src/msp.rs:394:26 [INFO] [stderr] | [INFO] [stderr] 394 | let slices = super::simple_scan::<_, Kmer8>(k, &DnaSlice(&dna), &permutation, true); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 3 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/debruijn-1185087d3d27298d [INFO] [stdout] [INFO] [stdout] running 48 tests [INFO] [stdout] test bitops_avx2::test::test_convert_bytes_for_debug ... ok [INFO] [stdout] test dna_string::tests::test_kmers ... ok [INFO] [stdout] test dna_string::tests::test_prefix ... ok [INFO] [stdout] test dna_string::tests::test_push_bytes ... ok [INFO] [stdout] test dna_string::tests::test_ndiffs ... ok [INFO] [stdout] test dna_string::tests::test_dna_string ... ok [INFO] [stdout] test dna_string::tests::test_from_dna_string ... ok [INFO] [stdout] test dna_string::tests::test_reverse ... ok [INFO] [stdout] test dna_string::tests::test_kmers_too_short ... ok [INFO] [stdout] test dna_string::tests::test_suffix ... ok [INFO] [stdout] test bitops_avx2::test::test_convert_bytes_random ... ok [INFO] [stdout] test kmer::tests::test_kmer_4 ... ok [INFO] [stdout] test bitops_avx2::test::test_invalid_bases ... ok [INFO] [stdout] test kmer::tests::test_kmer_10 ... ok [INFO] [stdout] test kmer::tests::test_kmer_5 ... ok [INFO] [stdout] test kmer::tests::test_kmer_16 ... ok [INFO] [stdout] test kmer::tests::test_kmer_14 ... ok [INFO] [stdout] test kmer::tests::test_kmer_12 ... ok [INFO] [stdout] test kmer::tests::test_kmer_6 ... ok [INFO] [stdout] test kmer::tests::test_kmer_15 ... ok [INFO] [stdout] test kmer::tests::test_kmer_8 ... ok [INFO] [stdout] test msp::tests::test1 ... ok [INFO] [stdout] test kmer::tests::test_kmer_20 ... ok [INFO] [stdout] test msp::tests::test_sample ... ok [INFO] [stdout] test msp::tests::test_slice ... ok [INFO] [stdout] test kmer::tests::test_kmer_24 ... ok [INFO] [stdout] test kmer::tests::test_kmer_31 ... ok [INFO] [stdout] test kmer::tests::test_kmer_32 ... ok [INFO] [stdout] test kmer::tests::test_lmer_1_kmer_24 ... ok [INFO] [stdout] test test::tests::degen_seq_asm ... ok [INFO] [stdout] test test::tests::degen_seq_asm_sharded ... ok [INFO] [stdout] test kmer::tests::test_lmer_1_kmer_20 ... ok [INFO] [stdout] test test::tests::simple_kmer_compress ... ok [INFO] [stdout] test test::tests::simple_path_compress ... ok [INFO] [stdout] test test::tests::simple_sharded ... ok [INFO] [stdout] test test::tests::simple_tip_clean ... ok [INFO] [stdout] test kmer::tests::test_lmer_1_kmer_16 ... ok [INFO] [stdout] test kmer::tests::test_kmer_48 ... ok [INFO] [stdout] test kmer::tests::test_kmer_64 ... ok [INFO] [stdout] test kmer::tests::test_lmer_3_kmer_32 ... ok [INFO] [stdout] test kmer::tests::test_lmer_3_kmer_64 ... ok [INFO] [stdout] test kmer::tests::test_lmer_2_kmer_32 ... ok [INFO] [stdout] test kmer::tests::test_lmer_3_kmer_48 ... ok [INFO] [stdout] test test::tests::complex_path_compress ... ok [INFO] [stdout] test test::tests::complex_sharded ... ok [INFO] [stdout] test test::tests::complex_kmer_compress ... ok [INFO] [stdout] test msp::tests::test_msp_scanner ... test msp::tests::test_msp_scanner has been running for over 60 seconds [INFO] [stdout] test test::tests::complex_path_compress_k31 ... test test::tests::complex_path_compress_k31 has been running for over 60 seconds [INFO] [stdout] test test::tests::complex_path_compress_k31 ... ok [ERROR] error running command: no output for 300 seconds [INFO] running `Command { std: "docker" "inspect" "793a3cb36ea9a6c8ab2ba4be2949be9d9113fd492af0143269d637ddc45124a4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "793a3cb36ea9a6c8ab2ba4be2949be9d9113fd492af0143269d637ddc45124a4", kill_on_drop: false }` [INFO] [stdout] 793a3cb36ea9a6c8ab2ba4be2949be9d9113fd492af0143269d637ddc45124a4