[INFO] cloning repository https://github.com/robsyme/rustalind [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/robsyme/rustalind" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frobsyme%2Frustalind", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frobsyme%2Frustalind'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 264d21ca5f12caf9ce4156f1d721874a4cd24e12 [INFO] testing robsyme/rustalind against try#eafdee2dfae8c2233b74f98b123308be7ccefcc6 for pr-79296 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frobsyme%2Frustalind" "/workspace/builds/worker-2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/robsyme/rustalind on toolchain eafdee2dfae8c2233b74f98b123308be7ccefcc6 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/robsyme/rustalind [INFO] finished tweaking git repo https://github.com/robsyme/rustalind [INFO] tweaked toml for git repo https://github.com/robsyme/rustalind written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate git repo https://github.com/robsyme/rustalind already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 176d99fb753deaf6363c747468b001c1ffb43e450fd804f0b0734f7f265428e0 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "176d99fb753deaf6363c747468b001c1ffb43e450fd804f0b0734f7f265428e0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "176d99fb753deaf6363c747468b001c1ffb43e450fd804f0b0734f7f265428e0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "176d99fb753deaf6363c747468b001c1ffb43e450fd804f0b0734f7f265428e0", kill_on_drop: false }` [INFO] [stdout] 176d99fb753deaf6363c747468b001c1ffb43e450fd804f0b0734f7f265428e0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 02ba1de053c05666fd8c1cc3115ddb916e5277ebeff490da7adbba4c28a99313 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "02ba1de053c05666fd8c1cc3115ddb916e5277ebeff490da7adbba4c28a99313", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.49 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling clap v2.32.0 [INFO] [stderr] Compiling rustalind v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::convert::TryFrom` [INFO] [stdout] --> src/seq/nuc.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use std::convert::TryFrom; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 15.20s [INFO] running `Command { std: "docker" "inspect" "02ba1de053c05666fd8c1cc3115ddb916e5277ebeff490da7adbba4c28a99313", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "02ba1de053c05666fd8c1cc3115ddb916e5277ebeff490da7adbba4c28a99313", kill_on_drop: false }` [INFO] [stdout] 02ba1de053c05666fd8c1cc3115ddb916e5277ebeff490da7adbba4c28a99313 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ee600ec43699cbdb18fffc76a67105a62d7a2c2abbf653a408616f75fb75e29c [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ee600ec43699cbdb18fffc76a67105a62d7a2c2abbf653a408616f75fb75e29c", kill_on_drop: false }` [INFO] [stderr] Compiling rustalind v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::convert::TryFrom` [INFO] [stdout] --> src/seq/nuc.rs:2:5 [INFO] [stdout] | [INFO] [stdout] 2 | use std::convert::TryFrom; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.98s [INFO] running `Command { std: "docker" "inspect" "ee600ec43699cbdb18fffc76a67105a62d7a2c2abbf653a408616f75fb75e29c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ee600ec43699cbdb18fffc76a67105a62d7a2c2abbf653a408616f75fb75e29c", kill_on_drop: false }` [INFO] [stdout] ee600ec43699cbdb18fffc76a67105a62d7a2c2abbf653a408616f75fb75e29c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 5bbd5e5f0e17a20d725b66acaf15b531227af310fb86cd6f4402fc5e3b2da3d7 [INFO] running `Command { std: "docker" "start" "-a" "5bbd5e5f0e17a20d725b66acaf15b531227af310fb86cd6f4402fc5e3b2da3d7", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::convert::TryFrom` [INFO] [stderr] --> src/seq/nuc.rs:2:5 [INFO] [stderr] | [INFO] [stderr] 2 | use std::convert::TryFrom; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rustalind-188add8fb911e333 [INFO] [stdout] [INFO] [stdout] running 12 tests [INFO] [stdout] test io::tests::blank_fasta ... ok [INFO] [stdout] test io::tests::test_gc_counting ... ok [INFO] [stdout] test seq::codon::tests::test_table_integration ... ok [INFO] [stdout] test seq::nuc::tests::dna_as_tagged_enums ... ok [INFO] [stdout] test seq::nuc::tests::dna_bit_and ... ok [INFO] [stdout] test seq::nuc::tests::dna_complement ... ok [INFO] [stdout] test seq::nuc::tests::dna_from_chars ... ok [INFO] [stdout] test seq::nuc::tests::dna_bit_xor ... ok [INFO] [stdout] test seq::nuc::tests::dna_from_string ... ok [INFO] [stdout] test seq::translation::tests::test_get ... ok [INFO] [stdout] test seq::nuc::tests::dna_bit_or ... ok [INFO] [stdout] test io::tests::erroneous_fasta ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 12 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rustalind-e44b0adc699a50c4 [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test prot::tests::test_translate ... ok [INFO] [stdout] test revc::tests::test_reverse_complement ... ok [INFO] [stdout] test rna::tests::test_translation ... ok [INFO] [stdout] test fib::tests::test_basic_recurrence ... ok [INFO] [stdout] test hamm::tests::basic_distance ... ok [INFO] [stdout] test dna::tests::count_basic_occurrences ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests rustalind [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "5bbd5e5f0e17a20d725b66acaf15b531227af310fb86cd6f4402fc5e3b2da3d7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5bbd5e5f0e17a20d725b66acaf15b531227af310fb86cd6f4402fc5e3b2da3d7", kill_on_drop: false }` [INFO] [stdout] 5bbd5e5f0e17a20d725b66acaf15b531227af310fb86cd6f4402fc5e3b2da3d7