[INFO] cloning repository https://github.com/joyliu-q/rust-genomics [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/joyliu-q/rust-genomics" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjoyliu-q%2Frust-genomics", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjoyliu-q%2Frust-genomics'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] a62b7e31b41dd1efe396e5ee25b420c4b5bdb887 [INFO] testing joyliu-q/rust-genomics against try#eafdee2dfae8c2233b74f98b123308be7ccefcc6 for pr-79296 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fjoyliu-q%2Frust-genomics" "/workspace/builds/worker-8/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-8/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/joyliu-q/rust-genomics on toolchain eafdee2dfae8c2233b74f98b123308be7ccefcc6 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/joyliu-q/rust-genomics [INFO] finished tweaking git repo https://github.com/joyliu-q/rust-genomics [INFO] tweaked toml for git repo https://github.com/joyliu-q/rust-genomics written to /workspace/builds/worker-8/source/Cargo.toml [INFO] crate git repo https://github.com/joyliu-q/rust-genomics already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rayon v1.4.1 [INFO] [stderr] Downloaded rayon-core v1.8.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] e942e19d7b16016e1a84bd43efd72d9233eca738d1ac2b975ca0ce3c0d74b43b [INFO] running `Command { std: "docker" "start" "-a" "e942e19d7b16016e1a84bd43efd72d9233eca738d1ac2b975ca0ce3c0d74b43b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e942e19d7b16016e1a84bd43efd72d9233eca738d1ac2b975ca0ce3c0d74b43b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e942e19d7b16016e1a84bd43efd72d9233eca738d1ac2b975ca0ce3c0d74b43b", kill_on_drop: false }` [INFO] [stdout] e942e19d7b16016e1a84bd43efd72d9233eca738d1ac2b975ca0ce3c0d74b43b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 29c219a8d26aeefaf73e49c6e7b59117435234fd61ef7b82678a724a93f74e3f [INFO] running `Command { std: "docker" "start" "-a" "29c219a8d26aeefaf73e49c6e7b59117435234fd61ef7b82678a724a93f74e3f", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling libc v0.2.79 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling rayon-core v1.8.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling rayon v1.4.1 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling crossbeam-channel v0.4.4 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling rust-genomics v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused imports: `damerau_levenshtein`, `hamming`, `jaro_winkler`, `jaro`, `levenshtein`, `normalized_damerau_levenshtein`, `osa_distance`, `sorensen_dice` [INFO] [stdout] --> src/lib.rs:13:14 [INFO] [stdout] | [INFO] [stdout] 13 | use strsim::{hamming, levenshtein, normalized_levenshtein, osa_distance, [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^^^ ^^^^^^^^^^^^ [INFO] [stdout] 14 | damerau_levenshtein, normalized_damerau_levenshtein, jaro, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ^^^^ [INFO] [stdout] 15 | jaro_winkler, sorensen_dice}; [INFO] [stdout] | ^^^^^^^^^^^^ ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Write` [INFO] [stdout] --> src/lib.rs:7:15 [INFO] [stdout] | [INFO] [stdout] 7 | use std::io::{Write, BufReader, BufRead}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/lib.rs:259:13 [INFO] [stdout] | [INFO] [stdout] 259 | let mut diff = 0; [INFO] [stdout] | ----^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum is never used: `Nucleotide` [INFO] [stdout] --> src/lib.rs:23:6 [INFO] [stdout] | [INFO] [stdout] 23 | enum Nucleotide { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `to_char` [INFO] [stdout] --> src/lib.rs:30:8 [INFO] [stdout] | [INFO] [stdout] 30 | fn to_char(&self) -> char { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `index_to_nt` [INFO] [stdout] --> src/lib.rs:38:8 [INFO] [stdout] | [INFO] [stdout] 38 | fn index_to_nt(index: usize) -> Result { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `check` [INFO] [stdout] --> src/lib.rs:84:8 [INFO] [stdout] | [INFO] [stdout] 84 | fn check(&self) -> bool { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/lib.rs:309:9 [INFO] [stdout] | [INFO] [stdout] 309 | write!(f, "File Name: {}\n", self.name); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/lib.rs:311:13 [INFO] [stdout] | [INFO] [stdout] 311 | write!(f, "Header: {}\nSequence: {}\n\n", record.header, record.sequence); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Sequence` [INFO] [stdout] --> src/main.rs:1:21 [INFO] [stdout] | [INFO] [stdout] 1 | use rust_genomics::{Sequence, FASTA}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 22.21s [INFO] running `Command { std: "docker" "inspect" "29c219a8d26aeefaf73e49c6e7b59117435234fd61ef7b82678a724a93f74e3f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "29c219a8d26aeefaf73e49c6e7b59117435234fd61ef7b82678a724a93f74e3f", kill_on_drop: false }` [INFO] [stdout] 29c219a8d26aeefaf73e49c6e7b59117435234fd61ef7b82678a724a93f74e3f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f6c5d4ef78d751125f1f7a7c8ff8cb86082cf3e105d3843209c6f5acf2f77078 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "f6c5d4ef78d751125f1f7a7c8ff8cb86082cf3e105d3843209c6f5acf2f77078", kill_on_drop: false }` [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.45 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling half v1.6.0 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling regex-syntax v0.6.20 [INFO] [stderr] Compiling oorandom v11.1.2 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling walkdir v2.3.1 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stdout] warning: unused imports: `damerau_levenshtein`, `hamming`, `jaro_winkler`, `jaro`, `levenshtein`, `normalized_damerau_levenshtein`, `osa_distance`, `sorensen_dice` [INFO] [stdout] --> src/lib.rs:13:14 [INFO] [stdout] | [INFO] [stdout] 13 | use strsim::{hamming, levenshtein, normalized_levenshtein, osa_distance, [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^^^ ^^^^^^^^^^^^ [INFO] [stdout] 14 | damerau_levenshtein, normalized_damerau_levenshtein, jaro, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ^^^^ [INFO] [stdout] 15 | jaro_winkler, sorensen_dice}; [INFO] [stdout] | ^^^^^^^^^^^^ ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Write` [INFO] [stdout] --> src/lib.rs:7:15 [INFO] [stdout] | [INFO] [stdout] 7 | use std::io::{Write, BufReader, BufRead}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/lib.rs:259:13 [INFO] [stdout] | [INFO] [stdout] 259 | let mut diff = 0; [INFO] [stdout] | ----^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum is never used: `Nucleotide` [INFO] [stdout] --> src/lib.rs:23:6 [INFO] [stdout] | [INFO] [stdout] 23 | enum Nucleotide { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `to_char` [INFO] [stdout] --> src/lib.rs:30:8 [INFO] [stdout] | [INFO] [stdout] 30 | fn to_char(&self) -> char { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `index_to_nt` [INFO] [stdout] --> src/lib.rs:38:8 [INFO] [stdout] | [INFO] [stdout] 38 | fn index_to_nt(index: usize) -> Result { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `check` [INFO] [stdout] --> src/lib.rs:84:8 [INFO] [stdout] | [INFO] [stdout] 84 | fn check(&self) -> bool { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/lib.rs:309:9 [INFO] [stdout] | [INFO] [stdout] 309 | write!(f, "File Name: {}\n", self.name); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/lib.rs:311:13 [INFO] [stdout] | [INFO] [stdout] 311 | write!(f, "Header: {}\nSequence: {}\n\n", record.header, record.sequence); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling cast v0.2.3 [INFO] [stderr] Compiling criterion-plot v0.4.3 [INFO] [stderr] Compiling plotters v0.2.15 [INFO] [stderr] Compiling regex v1.4.1 [INFO] [stderr] Compiling bstr v0.2.14 [INFO] [stderr] Compiling serde_cbor v0.11.1 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling tinytemplate v1.1.0 [INFO] [stderr] Compiling criterion v0.3.3 [INFO] [stderr] Compiling rust-genomics v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `Sequence` [INFO] [stdout] --> src/main.rs:1:21 [INFO] [stdout] | [INFO] [stdout] 1 | use rust_genomics::{Sequence, FASTA}; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `damerau_levenshtein`, `hamming`, `jaro_winkler`, `jaro`, `levenshtein`, `normalized_damerau_levenshtein`, `osa_distance`, `sorensen_dice` [INFO] [stdout] --> src/lib.rs:13:14 [INFO] [stdout] | [INFO] [stdout] 13 | use strsim::{hamming, levenshtein, normalized_levenshtein, osa_distance, [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^^^ ^^^^^^^^^^^^ [INFO] [stdout] 14 | damerau_levenshtein, normalized_damerau_levenshtein, jaro, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ^^^^ [INFO] [stdout] 15 | jaro_winkler, sorensen_dice}; [INFO] [stdout] | ^^^^^^^^^^^^ ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `Write` [INFO] [stdout] --> src/lib.rs:7:15 [INFO] [stdout] | [INFO] [stdout] 7 | use std::io::{Write, BufReader, BufRead}; [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/lib.rs:259:13 [INFO] [stdout] | [INFO] [stdout] 259 | let mut diff = 0; [INFO] [stdout] | ----^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum is never used: `Nucleotide` [INFO] [stdout] --> src/lib.rs:23:6 [INFO] [stdout] | [INFO] [stdout] 23 | enum Nucleotide { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `to_char` [INFO] [stdout] --> src/lib.rs:30:8 [INFO] [stdout] | [INFO] [stdout] 30 | fn to_char(&self) -> char { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `index_to_nt` [INFO] [stdout] --> src/lib.rs:38:8 [INFO] [stdout] | [INFO] [stdout] 38 | fn index_to_nt(index: usize) -> Result { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `check` [INFO] [stdout] --> src/lib.rs:84:8 [INFO] [stdout] | [INFO] [stdout] 84 | fn check(&self) -> bool { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/lib.rs:309:9 [INFO] [stdout] | [INFO] [stdout] 309 | write!(f, "File Name: {}\n", self.name); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/lib.rs:311:13 [INFO] [stdout] | [INFO] [stdout] 311 | write!(f, "Header: {}\nSequence: {}\n\n", record.header, record.sequence); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1m 36s [INFO] running `Command { std: "docker" "inspect" "f6c5d4ef78d751125f1f7a7c8ff8cb86082cf3e105d3843209c6f5acf2f77078", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f6c5d4ef78d751125f1f7a7c8ff8cb86082cf3e105d3843209c6f5acf2f77078", kill_on_drop: false }` [INFO] [stdout] f6c5d4ef78d751125f1f7a7c8ff8cb86082cf3e105d3843209c6f5acf2f77078 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] e21e86875ae9ed4c73744f750951a1b356da3212c01c8f5b5d14b6d57b3e0129 [INFO] running `Command { std: "docker" "start" "-a" "e21e86875ae9ed4c73744f750951a1b356da3212c01c8f5b5d14b6d57b3e0129", kill_on_drop: false }` [INFO] [stderr] warning: unused imports: `damerau_levenshtein`, `hamming`, `jaro_winkler`, `jaro`, `levenshtein`, `normalized_damerau_levenshtein`, `osa_distance`, `sorensen_dice` [INFO] [stderr] --> src/lib.rs:13:14 [INFO] [stderr] | [INFO] [stderr] 13 | use strsim::{hamming, levenshtein, normalized_levenshtein, osa_distance, [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^^^ ^^^^^^^^^^^^ [INFO] [stderr] 14 | damerau_levenshtein, normalized_damerau_levenshtein, jaro, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ^^^^ [INFO] [stderr] 15 | jaro_winkler, sorensen_dice}; [INFO] [stderr] | ^^^^^^^^^^^^ ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `Write` [INFO] [stderr] --> src/lib.rs:7:15 [INFO] [stderr] | [INFO] [stderr] 7 | use std::io::{Write, BufReader, BufRead}; [INFO] [stderr] | ^^^^^ [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/lib.rs:259:13 [INFO] [stderr] | [INFO] [stderr] 259 | let mut diff = 0; [INFO] [stderr] | ----^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: enum is never used: `Nucleotide` [INFO] [stderr] --> src/lib.rs:23:6 [INFO] [stderr] | [INFO] [stderr] 23 | enum Nucleotide { [INFO] [stderr] | ^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: associated function is never used: `to_char` [INFO] [stderr] --> src/lib.rs:30:8 [INFO] [stderr] | [INFO] [stderr] 30 | fn to_char(&self) -> char { [INFO] [stderr] | ^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: associated function is never used: `index_to_nt` [INFO] [stderr] --> src/lib.rs:38:8 [INFO] [stderr] | [INFO] [stderr] 38 | fn index_to_nt(index: usize) -> Result { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: associated function is never used: `check` [INFO] [stderr] --> src/lib.rs:84:8 [INFO] [stderr] | [INFO] [stderr] 84 | fn check(&self) -> bool { [INFO] [stderr] | ^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:309:9 [INFO] [stderr] | [INFO] [stderr] 309 | write!(f, "File Name: {}\n", self.name); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:311:13 [INFO] [stderr] | [INFO] [stderr] 311 | write!(f, "Header: {}\nSequence: {}\n\n", record.header, record.sequence); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: 9 warnings emitted [INFO] [stderr] [INFO] [stderr] warning: unused import: `Sequence` [INFO] [stderr] --> src/main.rs:1:21 [INFO] [stderr] | [INFO] [stderr] 1 | use rust_genomics::{Sequence, FASTA}; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] warning: unused imports: `damerau_levenshtein`, `hamming`, `jaro_winkler`, `jaro`, `levenshtein`, `normalized_damerau_levenshtein`, `osa_distance`, `sorensen_dice` [INFO] [stderr] --> src/lib.rs:13:14 [INFO] [stderr] | [INFO] [stderr] 13 | use strsim::{hamming, levenshtein, normalized_levenshtein, osa_distance, [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^^^ ^^^^^^^^^^^^ [INFO] [stderr] 14 | damerau_levenshtein, normalized_damerau_levenshtein, jaro, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ^^^^ [INFO] [stderr] 15 | jaro_winkler, sorensen_dice}; [INFO] [stderr] | ^^^^^^^^^^^^ ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `Write` [INFO] [stderr] --> src/lib.rs:7:15 [INFO] [stderr] | [INFO] [stderr] 7 | use std::io::{Write, BufReader, BufRead}; [INFO] [stderr] | ^^^^^ [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/lib.rs:259:13 [INFO] [stderr] | [INFO] [stderr] 259 | let mut diff = 0; [INFO] [stderr] | ----^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: enum is never used: `Nucleotide` [INFO] [stderr] --> src/lib.rs:23:6 [INFO] [stderr] | [INFO] [stderr] 23 | enum Nucleotide { [INFO] [stderr] | ^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: associated function is never used: `to_char` [INFO] [stderr] --> src/lib.rs:30:8 [INFO] [stderr] | [INFO] [stderr] 30 | fn to_char(&self) -> char { [INFO] [stderr] | ^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: associated function is never used: `index_to_nt` [INFO] [stderr] --> src/lib.rs:38:8 [INFO] [stderr] | [INFO] [stderr] 38 | fn index_to_nt(index: usize) -> Result { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: associated function is never used: `check` [INFO] [stderr] --> src/lib.rs:84:8 [INFO] [stderr] | [INFO] [stderr] 84 | fn check(&self) -> bool { [INFO] [stderr] | ^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:309:9 [INFO] [stderr] | [INFO] [stderr] 309 | write!(f, "File Name: {}\n", self.name); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/lib.rs:311:13 [INFO] [stderr] | [INFO] [stderr] 311 | write!(f, "Header: {}\nSequence: {}\n\n", record.header, record.sequence); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: 9 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rust_genomics-3860b5064dc88307 [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test tests::compare_lorf_methods ... ignored [INFO] [stdout] test tests::lorf ... ignored [INFO] [stdout] test tests::test_rayon_fasta ... ignored [INFO] [stdout] test tests::test_fasta_record_struct ... ok [INFO] [stdout] test tests::test_sequence_struct ... ok [INFO] [stdout] test tests::test_fasta_struct ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 3 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rust_genomics-3e0c363da8fe4ad0 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests rust-genomics [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test src/lib.rs - Sequence::return_reading_frames (line 109) ... ignored [INFO] [stdout] test src/lib.rs - Sequence::gen_random_seq (line 244) ... ok [INFO] [stdout] test src/lib.rs - Sequence::new (line 76) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e21e86875ae9ed4c73744f750951a1b356da3212c01c8f5b5d14b6d57b3e0129", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e21e86875ae9ed4c73744f750951a1b356da3212c01c8f5b5d14b6d57b3e0129", kill_on_drop: false }` [INFO] [stdout] e21e86875ae9ed4c73744f750951a1b356da3212c01c8f5b5d14b6d57b3e0129