[INFO] cloning repository https://github.com/StephanHeijl/global-supertrees [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/StephanHeijl/global-supertrees" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FStephanHeijl%2Fglobal-supertrees", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FStephanHeijl%2Fglobal-supertrees'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 60f3ba049bd818be391b122113e956c8fcf55339 [INFO] testing StephanHeijl/global-supertrees against try#eafdee2dfae8c2233b74f98b123308be7ccefcc6 for pr-79296 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FStephanHeijl%2Fglobal-supertrees" "/workspace/builds/worker-8/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-8/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/StephanHeijl/global-supertrees on toolchain eafdee2dfae8c2233b74f98b123308be7ccefcc6 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/StephanHeijl/global-supertrees [INFO] finished tweaking git repo https://github.com/StephanHeijl/global-supertrees [INFO] tweaked toml for git repo https://github.com/StephanHeijl/global-supertrees written to /workspace/builds/worker-8/source/Cargo.toml [INFO] crate git repo https://github.com/StephanHeijl/global-supertrees already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded unindent v0.1.5 [INFO] [stderr] Downloaded indoc-impl v0.3.4 [INFO] [stderr] Downloaded half v1.4.0 [INFO] [stderr] Downloaded pyo3 v0.8.1 [INFO] [stderr] Downloaded indoc v0.3.4 [INFO] [stderr] Downloaded numpy v0.7.0 [INFO] [stderr] Downloaded pyo3cls v0.8.1 [INFO] [stderr] Downloaded pyo3-derive-backend v0.8.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8341dc0e3d38852a52c8da2d4ed8e1c3efe60f43bde11f479047aa1ebb7bbe31 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8341dc0e3d38852a52c8da2d4ed8e1c3efe60f43bde11f479047aa1ebb7bbe31", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8341dc0e3d38852a52c8da2d4ed8e1c3efe60f43bde11f479047aa1ebb7bbe31", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8341dc0e3d38852a52c8da2d4ed8e1c3efe60f43bde11f479047aa1ebb7bbe31", kill_on_drop: false }` [INFO] [stdout] 8341dc0e3d38852a52c8da2d4ed8e1c3efe60f43bde11f479047aa1ebb7bbe31 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7538c3e3f1ead2bc90f4e3482bbcf428c0f03888c4b2b17e0578223785347424 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7538c3e3f1ead2bc90f4e3482bbcf428c0f03888c4b2b17e0578223785347424", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling syn v1.0.5 [INFO] [stderr] Compiling libc v0.2.65 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling arrayvec v0.4.12 [INFO] [stderr] Compiling serde v1.0.101 [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling rayon-core v1.6.0 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling unindent v0.1.5 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling half v1.4.0 [INFO] [stderr] Compiling crossbeam-utils v0.6.6 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling bincode v1.2.0 [INFO] [stderr] Compiling itertools v0.8.0 [INFO] [stderr] Compiling c2-chacha v0.2.2 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling memoffset v0.5.1 [INFO] [stderr] Compiling crossbeam-queue v0.1.2 [INFO] [stderr] Compiling crossbeam-epoch v0.7.2 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling crossbeam-deque v0.7.1 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling getrandom v0.1.12 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling rand v0.7.2 [INFO] [stderr] Compiling rayon v1.2.0 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling pyo3-derive-backend v0.8.1 [INFO] [stderr] Compiling serde_derive v1.0.101 [INFO] [stderr] Compiling proc-macro-hack v0.5.11 [INFO] [stderr] Compiling ghost v0.1.1 [INFO] [stderr] Compiling ctor v0.1.12 [INFO] [stderr] Compiling inventory-impl v0.1.4 [INFO] [stderr] Compiling pyo3cls v0.8.1 [INFO] [stderr] Compiling inventory v0.1.4 [INFO] [stderr] Compiling indoc-impl v0.3.4 [INFO] [stderr] Compiling paste-impl v0.1.6 [INFO] [stderr] Compiling indoc v0.3.4 [INFO] [stderr] Compiling paste v0.1.6 [INFO] [stderr] Compiling serde_json v1.0.41 [INFO] [stderr] Compiling pyo3 v0.8.1 [INFO] [stderr] Compiling numpy v0.7.0 [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `m` [INFO] [stdout] --> src/lib.rs:31:26 [INFO] [stdout] | [INFO] [stdout] 31 | fn rust_ext(_py: Python, m: &PyModule) -> PyResult<()> { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_m` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `matrix_size` [INFO] [stdout] --> src/graph_tree.rs:465:13 [INFO] [stdout] | [INFO] [stdout] 465 | let mut matrix_size: usize = 0; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_matrix_size` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `leaf` [INFO] [stdout] --> src/graph_tree.rs:470:17 [INFO] [stdout] | [INFO] [stdout] 470 | for leaf in child.leaves.iter() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `leaf` [INFO] [stdout] --> src/graph_tree.rs:478:17 [INFO] [stdout] | [INFO] [stdout] 478 | for leaf in child.leaves.iter() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph_tree.rs:465:13 [INFO] [stdout] | [INFO] [stdout] 465 | let mut matrix_size: usize = 0; [INFO] [stdout] | ----^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph_tree.rs:475:13 [INFO] [stdout] | [INFO] [stdout] 475 | let mut connection_matrix: Array2 = Array2::zeros((n_leaves, n_leaves)); [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `convert_file_to_dm` [INFO] [stdout] --> src/lib.rs:32:8 [INFO] [stdout] | [INFO] [stdout] 32 | fn convert_file_to_dm(fname : String) -> Array2 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `convert_file_to_distance_matrix_py` [INFO] [stdout] --> src/lib.rs:39:8 [INFO] [stdout] | [INFO] [stdout] 39 | fn convert_file_to_distance_matrix_py(py: Python, fname: String) -> Py> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/bin.rs:1:13 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use(s)] [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::f32` [INFO] [stdout] --> src/bin/bin.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::f32; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rand::prelude::*` [INFO] [stdout] --> src/bin/bin.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use rand::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/bin/bin.rs:109:13 [INFO] [stdout] | [INFO] [stdout] 109 | out_tree_file.write_all(tree.to_newick().as_bytes()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 08s [INFO] running `Command { std: "docker" "inspect" "7538c3e3f1ead2bc90f4e3482bbcf428c0f03888c4b2b17e0578223785347424", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7538c3e3f1ead2bc90f4e3482bbcf428c0f03888c4b2b17e0578223785347424", kill_on_drop: false }` [INFO] [stdout] 7538c3e3f1ead2bc90f4e3482bbcf428c0f03888c4b2b17e0578223785347424 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c6b31070c1a860f47a980fec58a584a8fd51da4b44c45cf7a7e02cb2026c43ba [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "c6b31070c1a860f47a980fec58a584a8fd51da4b44c45cf7a7e02cb2026c43ba", kill_on_drop: false }` [INFO] [stderr] Compiling global-supertrees v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `m` [INFO] [stdout] --> src/lib.rs:31:26 [INFO] [stdout] | [INFO] [stdout] 31 | fn rust_ext(_py: Python, m: &PyModule) -> PyResult<()> { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_m` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `matrix_size` [INFO] [stdout] --> src/graph_tree.rs:465:13 [INFO] [stdout] | [INFO] [stdout] 465 | let mut matrix_size: usize = 0; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_matrix_size` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `leaf` [INFO] [stdout] --> src/graph_tree.rs:470:17 [INFO] [stdout] | [INFO] [stdout] 470 | for leaf in child.leaves.iter() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `leaf` [INFO] [stdout] --> src/graph_tree.rs:478:17 [INFO] [stdout] | [INFO] [stdout] 478 | for leaf in child.leaves.iter() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph_tree.rs:465:13 [INFO] [stdout] | [INFO] [stdout] 465 | let mut matrix_size: usize = 0; [INFO] [stdout] | ----^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph_tree.rs:475:13 [INFO] [stdout] | [INFO] [stdout] 475 | let mut connection_matrix: Array2 = Array2::zeros((n_leaves, n_leaves)); [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `convert_file_to_dm` [INFO] [stdout] --> src/lib.rs:32:8 [INFO] [stdout] | [INFO] [stdout] 32 | fn convert_file_to_dm(fname : String) -> Array2 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `convert_file_to_distance_matrix_py` [INFO] [stdout] --> src/lib.rs:39:8 [INFO] [stdout] | [INFO] [stdout] 39 | fn convert_file_to_distance_matrix_py(py: Python, fname: String) -> Py> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 8 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/bin/bin.rs:1:13 [INFO] [stdout] | [INFO] [stdout] 1 | #[macro_use(s)] [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::f32` [INFO] [stdout] --> src/bin/bin.rs:10:5 [INFO] [stdout] | [INFO] [stdout] 10 | use std::f32; [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `rand::prelude::*` [INFO] [stdout] --> src/bin/bin.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use rand::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/bin/bin.rs:109:13 [INFO] [stdout] | [INFO] [stdout] 109 | out_tree_file.write_all(tree.to_newick().as_bytes()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `m` [INFO] [stdout] --> src/lib.rs:31:26 [INFO] [stdout] | [INFO] [stdout] 31 | fn rust_ext(_py: Python, m: &PyModule) -> PyResult<()> { [INFO] [stdout] | ^ help: if this is intentional, prefix it with an underscore: `_m` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 4 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `mapping` is never read [INFO] [stdout] --> src/tests.rs:262:13 [INFO] [stdout] | [INFO] [stdout] 262 | let mut mapping : BTreeMap<[u8; 10], u32> = BTreeMap::new(); [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_assignments)]` on by default [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `matrix_size` [INFO] [stdout] --> src/graph_tree.rs:465:13 [INFO] [stdout] | [INFO] [stdout] 465 | let mut matrix_size: usize = 0; [INFO] [stdout] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_matrix_size` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `leaf` [INFO] [stdout] --> src/graph_tree.rs:470:17 [INFO] [stdout] | [INFO] [stdout] 470 | for leaf in child.leaves.iter() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `leaf` [INFO] [stdout] --> src/graph_tree.rs:478:17 [INFO] [stdout] | [INFO] [stdout] 478 | for leaf in child.leaves.iter() { [INFO] [stdout] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph_tree.rs:465:13 [INFO] [stdout] | [INFO] [stdout] 465 | let mut matrix_size: usize = 0; [INFO] [stdout] | ----^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/graph_tree.rs:475:13 [INFO] [stdout] | [INFO] [stdout] 475 | let mut connection_matrix: Array2 = Array2::zeros((n_leaves, n_leaves)); [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `convert_file_to_dm` [INFO] [stdout] --> src/lib.rs:32:8 [INFO] [stdout] | [INFO] [stdout] 32 | fn convert_file_to_dm(fname : String) -> Array2 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `convert_file_to_distance_matrix_py` [INFO] [stdout] --> src/lib.rs:39:8 [INFO] [stdout] | [INFO] [stdout] 39 | fn convert_file_to_distance_matrix_py(py: Python, fname: String) -> Py> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 9 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 11.47s [INFO] running `Command { std: "docker" "inspect" "c6b31070c1a860f47a980fec58a584a8fd51da4b44c45cf7a7e02cb2026c43ba", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c6b31070c1a860f47a980fec58a584a8fd51da4b44c45cf7a7e02cb2026c43ba", kill_on_drop: false }` [INFO] [stdout] c6b31070c1a860f47a980fec58a584a8fd51da4b44c45cf7a7e02cb2026c43ba [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e068eba6f4b8ae62233a410571d35b7912b1e5cbe7aa7540c34680939cd0848f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e068eba6f4b8ae62233a410571d35b7912b1e5cbe7aa7540c34680939cd0848f", kill_on_drop: false }` [INFO] [stderr] warning: unused variable: `m` [INFO] [stderr] --> src/lib.rs:31:26 [INFO] [stderr] | [INFO] [stderr] 31 | fn rust_ext(_py: Python, m: &PyModule) -> PyResult<()> { [INFO] [stderr] | ^ help: if this is intentional, prefix it with an underscore: `_m` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `matrix_size` [INFO] [stderr] --> src/graph_tree.rs:465:13 [INFO] [stderr] | [INFO] [stderr] 465 | let mut matrix_size: usize = 0; [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_matrix_size` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `leaf` [INFO] [stderr] --> src/graph_tree.rs:470:17 [INFO] [stderr] | [INFO] [stderr] 470 | for leaf in child.leaves.iter() { [INFO] [stderr] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `leaf` [INFO] [stderr] --> src/graph_tree.rs:478:17 [INFO] [stderr] | [INFO] [stderr] 478 | for leaf in child.leaves.iter() { [INFO] [stderr] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/graph_tree.rs:465:13 [INFO] [stderr] | [INFO] [stderr] 465 | let mut matrix_size: usize = 0; [INFO] [stderr] | ----^^^^^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/graph_tree.rs:475:13 [INFO] [stderr] | [INFO] [stderr] 475 | let mut connection_matrix: Array2 = Array2::zeros((n_leaves, n_leaves)); [INFO] [stderr] | ----^^^^^^^^^^^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `convert_file_to_dm` [INFO] [stderr] --> src/lib.rs:32:8 [INFO] [stderr] | [INFO] [stderr] 32 | fn convert_file_to_dm(fname : String) -> Array2 { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: function is never used: `convert_file_to_distance_matrix_py` [INFO] [stderr] --> src/lib.rs:39:8 [INFO] [stderr] | [INFO] [stderr] 39 | fn convert_file_to_distance_matrix_py(py: Python, fname: String) -> Py> { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 8 warnings emitted [INFO] [stderr] [INFO] [stderr] warning: unused variable: `m` [INFO] [stderr] --> src/lib.rs:31:26 [INFO] [stderr] | [INFO] [stderr] 31 | fn rust_ext(_py: Python, m: &PyModule) -> PyResult<()> { [INFO] [stderr] | ^ help: if this is intentional, prefix it with an underscore: `_m` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: value assigned to `mapping` is never read [INFO] [stderr] --> src/tests.rs:262:13 [INFO] [stderr] | [INFO] [stderr] 262 | let mut mapping : BTreeMap<[u8; 10], u32> = BTreeMap::new(); [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_assignments)]` on by default [INFO] [stderr] = help: maybe it is overwritten before being read? [INFO] [stderr] [INFO] [stderr] warning: unused variable: `matrix_size` [INFO] [stderr] --> src/graph_tree.rs:465:13 [INFO] [stderr] | [INFO] [stderr] 465 | let mut matrix_size: usize = 0; [INFO] [stderr] | ^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_matrix_size` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `leaf` [INFO] [stderr] --> src/graph_tree.rs:470:17 [INFO] [stderr] | [INFO] [stderr] 470 | for leaf in child.leaves.iter() { [INFO] [stderr] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `leaf` [INFO] [stderr] --> src/graph_tree.rs:478:17 [INFO] [stderr] | [INFO] [stderr] 478 | for leaf in child.leaves.iter() { [INFO] [stderr] | ^^^^ help: if this is intentional, prefix it with an underscore: `_leaf` [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/graph_tree.rs:465:13 [INFO] [stderr] | [INFO] [stderr] 465 | let mut matrix_size: usize = 0; [INFO] [stderr] | ----^^^^^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/graph_tree.rs:475:13 [INFO] [stderr] | [INFO] [stderr] 475 | let mut connection_matrix: Array2 = Array2::zeros((n_leaves, n_leaves)); [INFO] [stderr] | ----^^^^^^^^^^^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] [INFO] [stderr] warning: function is never used: `convert_file_to_dm` [INFO] [stderr] --> src/lib.rs:32:8 [INFO] [stderr] | [INFO] [stderr] 32 | fn convert_file_to_dm(fname : String) -> Array2 { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: function is never used: `convert_file_to_distance_matrix_py` [INFO] [stderr] --> src/lib.rs:39:8 [INFO] [stderr] | [INFO] [stderr] 39 | fn convert_file_to_distance_matrix_py(py: Python, fname: String) -> Py> { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 9 warnings emitted [INFO] [stderr] [INFO] [stderr] warning: unused `#[macro_use]` import [INFO] [stderr] --> src/bin/bin.rs:1:13 [INFO] [stderr] | [INFO] [stderr] 1 | #[macro_use(s)] [INFO] [stderr] | ^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::f32` [INFO] [stderr] --> src/bin/bin.rs:10:5 [INFO] [stderr] | [INFO] [stderr] 10 | use std::f32; [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `rand::prelude::*` [INFO] [stderr] --> src/bin/bin.rs:15:5 [INFO] [stderr] | [INFO] [stderr] 15 | use rand::prelude::*; [INFO] [stderr] | ^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused `std::result::Result` that must be used [INFO] [stderr] --> src/bin/bin.rs:109:13 [INFO] [stderr] | [INFO] [stderr] 109 | out_tree_file.write_all(tree.to_newick().as_bytes()); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_must_use)]` on by default [INFO] [stderr] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stderr] [INFO] [stderr] warning: 4 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/global_supertrees-7e994e62ca7d2688 [INFO] [stdout] [INFO] [stdout] running 18 tests [INFO] [stdout] test tests::tests::test_find_first_common_ancestor ... ok [INFO] [stdout] test tests::tests::test_get_levels_from_root ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_2 ... ok [INFO] [stdout] test tests::tests::test_to_dot ... ok [INFO] [stdout] test tests::tests::test_to_newick ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_3 ... ok [INFO] [stdout] test tests::tests::test_load_tree_file ... ok [INFO] [stdout] test tests::tests::test_find_first_zero ... ok [INFO] [stdout] test test_tree_parsing::tests::test_construct_tree_from_file_1 ... ok [INFO] [stdout] test tests::tests::test_merge_organisms ... FAILED [INFO] [stdout] test tests::tests::test_merge_trees ... FAILED [INFO] [stdout] test tests::tests::test_tree_merging ... FAILED [INFO] [stdout] test tests::tests::test_batch_id_tax_mapping ... FAILED [INFO] [stdout] test tests::tests::test_to_distance_matrix_simple ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium ... ok [INFO] [stdout] test tests::tests::test_get_partial_tree ... ok [INFO] [stdout] test tests::tests::test_to_distance_matrix_medium_nested ... ok [INFO] [stdout] test tests::tests::test_neighbour_joining ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_merge_organisms stdout ---- [INFO] [stdout] thread 'tests::tests::test_merge_organisms' panicked at 'index out of bounds: the len is 2 but the index is 2', src/uniprot.rs:51:26 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ca2a9c8de0 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ca2a9c8de0 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ca2a9eee7c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ca2a9c4ec2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ca2a9cb665 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ca2a9cb665 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ca2a9cb665 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ca2a9cb1f2 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ca2a9cbe01 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ca2a9cb947 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ca2a9c929c - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ca2a9cb8a9 - rust_begin_unwind [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ca2a9ecb31 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ca2a9ecaf2 - core::panicking::panic_bounds_check::hec58b3e6eeb445f1 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:69:5 [INFO] [stdout] 16: 0x55ca2a98d502 - >::index::hbb0458e5e3872c44 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/slice/index.rs:182:10 [INFO] [stdout] 17: 0x55ca2a98ceb3 - core::slice::index:: for [T]>::index::h39c86e2321d46388 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/slice/index.rs:15:9 [INFO] [stdout] 18: 0x55ca2a98eb39 - as core::ops::index::Index>::index::hd63fbbea8d61f8eb [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/vec.rs:2161:9 [INFO] [stdout] 19: 0x55ca2a5e4a5a - global_supertrees::uniprot::load_mapping_file::ha879dd0d5b4de09e [INFO] [stdout] at /opt/rustwide/workdir/src/uniprot.rs:51:26 [INFO] [stdout] 20: 0x55ca2a6490ed - global_supertrees::tests::tests::test_merge_organisms::hfd8e925de09338c3 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:245:26 [INFO] [stdout] 21: 0x55ca2a64909a - global_supertrees::tests::tests::test_merge_organisms::{{closure}}::hcba9d5bfd600bb72 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:244:5 [INFO] [stdout] 22: 0x55ca2a601e7e - core::ops::function::FnOnce::call_once::h0f8b6a85ee69a31a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x55ca2a743033 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 24: 0x55ca2a743033 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:516:5 [INFO] [stdout] 25: 0x55ca2a741728 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 26: 0x55ca2a741728 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 27: 0x55ca2a741728 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 28: 0x55ca2a741728 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 29: 0x55ca2a741728 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 30: 0x55ca2a741728 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:538:18 [INFO] [stdout] 31: 0x55ca2a741728 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:449:39 [INFO] [stdout] 32: 0x55ca2a71bd16 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 33: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 34: 0x55ca2a7204dd - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 35: 0x55ca2a7204dd - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 36: 0x55ca2a7204dd - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 37: 0x55ca2a7204dd - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 38: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 39: 0x55ca2a7204dd - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 40: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 41: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 42: 0x55ca2a9d18ea - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 43: 0x7fcdcc2c2609 - start_thread [INFO] [stdout] 44: 0x7fcdcc094293 - clone [INFO] [stdout] 45: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_merge_trees stdout ---- [INFO] [stdout] thread 'tests::tests::test_merge_trees' panicked at 'index out of bounds: the len is 2 but the index is 2', src/uniprot.rs:51:26 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ca2a9c8de0 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ca2a9c8de0 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ca2a9eee7c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ca2a9c4ec2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ca2a9cb665 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ca2a9cb665 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ca2a9cb665 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ca2a9cb1f2 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ca2a9cbe01 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ca2a9cb947 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ca2a9c929c - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ca2a9cb8a9 - rust_begin_unwind [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ca2a9ecb31 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ca2a9ecaf2 - core::panicking::panic_bounds_check::hec58b3e6eeb445f1 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:69:5 [INFO] [stdout] 16: 0x55ca2a98d502 - >::index::hbb0458e5e3872c44 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/slice/index.rs:182:10 [INFO] [stdout] 17: 0x55ca2a98ceb3 - core::slice::index:: for [T]>::index::h39c86e2321d46388 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/slice/index.rs:15:9 [INFO] [stdout] 18: 0x55ca2a98eb39 - as core::ops::index::Index>::index::hd63fbbea8d61f8eb [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/vec.rs:2161:9 [INFO] [stdout] 19: 0x55ca2a5e4a5a - global_supertrees::uniprot::load_mapping_file::ha879dd0d5b4de09e [INFO] [stdout] at /opt/rustwide/workdir/src/uniprot.rs:51:26 [INFO] [stdout] 20: 0x55ca2a6496b1 - global_supertrees::tests::tests::test_merge_trees::h2f03523e368fa38b [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:271:27 [INFO] [stdout] 21: 0x55ca2a6495ea - global_supertrees::tests::tests::test_merge_trees::{{closure}}::h9020a3fbbb1fe7ee [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:261:5 [INFO] [stdout] 22: 0x55ca2a601d0e - core::ops::function::FnOnce::call_once::h012b3458b463da01 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x55ca2a743033 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 24: 0x55ca2a743033 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:516:5 [INFO] [stdout] 25: 0x55ca2a741728 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 26: 0x55ca2a741728 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 27: 0x55ca2a741728 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 28: 0x55ca2a741728 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 29: 0x55ca2a741728 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 30: 0x55ca2a741728 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:538:18 [INFO] [stdout] 31: 0x55ca2a741728 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:449:39 [INFO] [stdout] 32: 0x55ca2a71bd16 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 33: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 34: 0x55ca2a7204dd - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 35: 0x55ca2a7204dd - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 36: 0x55ca2a7204dd - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 37: 0x55ca2a7204dd - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 38: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 39: 0x55ca2a7204dd - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 40: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 41: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 42: 0x55ca2a9d18ea - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 43: 0x7fcdcc2c2609 - start_thread [INFO] [stdout] 44: 0x7fcdcc094293 - clone [INFO] [stdout] 45: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_tree_merging stdout ---- [INFO] [stdout] thread 'tests::tests::test_tree_merging' panicked at 'attempted to zero-initialize type `crossbeam_queue::seg_queue::Block`, which is invalid', /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/mem/mod.rs:623:9 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ca2a9c8de0 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ca2a9c8de0 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ca2a9eee7c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ca2a9c4ec2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ca2a9cb665 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ca2a9cb665 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ca2a9cb665 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ca2a9cb1f2 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ca2a9cbe01 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ca2a9cb917 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:495:13 [INFO] [stdout] 12: 0x55ca2a9c929c - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ca2a9cb8a9 - rust_begin_unwind [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ca2a9ecb31 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ca2a9eca7d - core::panicking::panic::h5d1c61fed2502a5f [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:50:5 [INFO] [stdout] 16: 0x55ca2a970560 - core::mem::zeroed::h117f1ab38ff2c9e8 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/mem/mod.rs:623:9 [INFO] [stdout] 17: 0x55ca2a970560 - crossbeam_queue::seg_queue::Block::new::hf7f8fcee0bfe8868 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/crossbeam-queue-0.1.2/src/seg_queue.rs:62:18 [INFO] [stdout] 18: 0x55ca2a971511 - crossbeam_queue::seg_queue::SegQueue::push::h906f55e690e0641e [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/crossbeam-queue-0.1.2/src/seg_queue.rs:206:50 [INFO] [stdout] 19: 0x55ca2a966398 - rayon_core::registry::Registry::inject::h0d95d1ed57b6a7b0 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-core-1.6.0/src/registry.rs:446:13 [INFO] [stdout] 20: 0x55ca2a5ed837 - rayon_core::registry::Registry::in_worker_cold::{{closure}}::h226384412ee815f2 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-core-1.6.0/src/registry.rs:505:13 [INFO] [stdout] 21: 0x55ca2a6a7cc6 - std::thread::local::LocalKey::try_with::h40b8ad32e6ab5f17 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/local.rs:272:16 [INFO] [stdout] 22: 0x55ca2a6a766d - std::thread::local::LocalKey::with::h77c0d441ad66d15e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/local.rs:248:9 [INFO] [stdout] 23: 0x55ca2a5ed2cc - rayon_core::registry::Registry::in_worker_cold::h40a35adbf4dac41f [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-core-1.6.0/src/registry.rs:494:9 [INFO] [stdout] 24: 0x55ca2a5f05f5 - rayon_core::registry::in_worker::h7fd4e4ac4a3ee5d2 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-core-1.6.0/src/registry.rs:855:13 [INFO] [stdout] 25: 0x55ca2a6d2d2d - rayon_core::join::join_context::h0c7c2c6eb017cb39 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-core-1.6.0/src/join/mod.rs:133:5 [INFO] [stdout] 26: 0x55ca2a69648a - rayon::iter::plumbing::bridge_producer_consumer::helper::hb6310351e4333415 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/plumbing/mod.rs:416:47 [INFO] [stdout] 27: 0x55ca2a692aca - rayon::iter::plumbing::bridge_producer_consumer::h5ac240eb4e4d88bb [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/plumbing/mod.rs:397:12 [INFO] [stdout] 28: 0x55ca2a6893e2 - as rayon::iter::plumbing::ProducerCallback>::callback::h9fc6f2d97402468d [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/plumbing/mod.rs:373:13 [INFO] [stdout] 29: 0x55ca2a610c2d - as rayon::iter::IndexedParallelIterator>::with_producer::h11e7d816858cd9d9 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/slice/mod.rs:487:9 [INFO] [stdout] 30: 0x55ca2a6999c5 - rayon::iter::plumbing::bridge::h2765aa07c4ce8bb7 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/plumbing/mod.rs:357:12 [INFO] [stdout] 31: 0x55ca2a60d27b - as rayon::iter::ParallelIterator>::drive_unindexed::hc4bf4002665465ea [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/slice/mod.rs:463:9 [INFO] [stdout] 32: 0x55ca2a63ab2b - as rayon::iter::ParallelIterator>::drive_unindexed::hb358bfdeee4984c0 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/map.rs:49:9 [INFO] [stdout] 33: 0x55ca2a69124b - rayon::iter::collect::special_extend::h021699605f674043 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/collect/mod.rs:42:5 [INFO] [stdout] 34: 0x55ca2a6c4e2d - rayon::iter::collect:: for alloc::vec::Vec>::par_extend::h5ce3338f70c6ce85 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/collect/mod.rs:136:17 [INFO] [stdout] 35: 0x55ca2a6169fe - rayon::iter::from_par_iter::collect_extended::h7d50042e3c8ebde0 [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/from_par_iter.rs:17:5 [INFO] [stdout] 36: 0x55ca2a6c464a - rayon::iter::from_par_iter:: for alloc::vec::Vec>::from_par_iter::he9b86654f11d256f [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/from_par_iter.rs:30:9 [INFO] [stdout] 37: 0x55ca2a632a1a - rayon::iter::ParallelIterator::collect::h4d04b91d7f2d775b [INFO] [stdout] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/rayon-1.2.0/src/iter/mod.rs:1887:9 [INFO] [stdout] 38: 0x55ca2a6f007c - global_supertrees::tree_merging::merge_trees::hda2d935cda911ddf [INFO] [stdout] at /opt/rustwide/workdir/src/tree_merging.rs:15:9 [INFO] [stdout] 39: 0x55ca2a6486a2 - global_supertrees::tests::tests::test_tree_merging::hf4cfdac8284d6713 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:201:27 [INFO] [stdout] 40: 0x55ca2a6484da - global_supertrees::tests::tests::test_tree_merging::{{closure}}::h5b7a94ebec6f9236 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:194:5 [INFO] [stdout] 41: 0x55ca2a601e1e - core::ops::function::FnOnce::call_once::h0d2bc161bf3840b9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 42: 0x55ca2a743033 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 43: 0x55ca2a743033 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:516:5 [INFO] [stdout] 44: 0x55ca2a741728 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 45: 0x55ca2a741728 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 46: 0x55ca2a741728 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 47: 0x55ca2a741728 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 48: 0x55ca2a741728 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 49: 0x55ca2a741728 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:538:18 [INFO] [stdout] 50: 0x55ca2a741728 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:449:39 [INFO] [stdout] 51: 0x55ca2a71bd16 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 52: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 53: 0x55ca2a7204dd - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 54: 0x55ca2a7204dd - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 55: 0x55ca2a7204dd - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 56: 0x55ca2a7204dd - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 57: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 58: 0x55ca2a7204dd - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 59: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 60: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 61: 0x55ca2a9d18ea - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 62: 0x7fcdcc2c2609 - start_thread [INFO] [stdout] 63: 0x7fcdcc094293 - clone [INFO] [stdout] 64: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::tests::test_batch_id_tax_mapping stdout ---- [INFO] [stdout] thread 'tests::tests::test_batch_id_tax_mapping' panicked at 'index out of bounds: the len is 2 but the index is 2', src/uniprot.rs:51:26 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ca2a9c8de0 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ca2a9c8de0 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ca2a9c8de0 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ca2a9eee7c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ca2a9c4ec2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ca2a9cb665 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ca2a9cb665 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ca2a9cb665 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ca2a9cb1f2 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ca2a9cbe01 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ca2a9cb947 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ca2a9c929c - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ca2a9cb8a9 - rust_begin_unwind [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ca2a9ecb31 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ca2a9ecaf2 - core::panicking::panic_bounds_check::hec58b3e6eeb445f1 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/panicking.rs:69:5 [INFO] [stdout] 16: 0x55ca2a98d502 - >::index::hbb0458e5e3872c44 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/slice/index.rs:182:10 [INFO] [stdout] 17: 0x55ca2a98ceb3 - core::slice::index:: for [T]>::index::h39c86e2321d46388 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/slice/index.rs:15:9 [INFO] [stdout] 18: 0x55ca2a98eb39 - as core::ops::index::Index>::index::hd63fbbea8d61f8eb [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/vec.rs:2161:9 [INFO] [stdout] 19: 0x55ca2a5e4a5a - global_supertrees::uniprot::load_mapping_file::ha879dd0d5b4de09e [INFO] [stdout] at /opt/rustwide/workdir/src/uniprot.rs:51:26 [INFO] [stdout] 20: 0x55ca2a648e77 - global_supertrees::tests::tests::test_batch_id_tax_mapping::hda1fe664ee784005 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:239:26 [INFO] [stdout] 21: 0x55ca2a648d4a - global_supertrees::tests::tests::test_batch_id_tax_mapping::{{closure}}::h81de2006c7c5c4b0 [INFO] [stdout] at /opt/rustwide/workdir/src/tests.rs:236:5 [INFO] [stdout] 22: 0x55ca2a60221e - core::ops::function::FnOnce::call_once::hbbe2c278c6f05917 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x55ca2a743033 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 24: 0x55ca2a743033 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:516:5 [INFO] [stdout] 25: 0x55ca2a741728 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 26: 0x55ca2a741728 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 27: 0x55ca2a741728 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 28: 0x55ca2a741728 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 29: 0x55ca2a741728 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 30: 0x55ca2a741728 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:538:18 [INFO] [stdout] 31: 0x55ca2a741728 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/test/src/lib.rs:449:39 [INFO] [stdout] 32: 0x55ca2a71bd16 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 33: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 34: 0x55ca2a7204dd - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:322:9 [INFO] [stdout] 35: 0x55ca2a7204dd - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stdout] 36: 0x55ca2a7204dd - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stdout] 37: 0x55ca2a7204dd - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stdout] 38: 0x55ca2a7204dd - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 39: 0x55ca2a7204dd - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 40: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 41: 0x55ca2a9d18ea - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 42: 0x55ca2a9d18ea - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 43: 0x7fcdcc2c2609 - start_thread [INFO] [stdout] 44: 0x7fcdcc094293 - clone [INFO] [stdout] 45: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::tests::test_batch_id_tax_mapping [INFO] [stdout] tests::tests::test_merge_organisms [INFO] [stdout] tests::tests::test_merge_trees [INFO] [stdout] tests::tests::test_tree_merging [INFO] [stdout] [INFO] [stdout] test result: FAILED. 14 passed; 4 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] running `Command { std: "docker" "inspect" "e068eba6f4b8ae62233a410571d35b7912b1e5cbe7aa7540c34680939cd0848f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e068eba6f4b8ae62233a410571d35b7912b1e5cbe7aa7540c34680939cd0848f", kill_on_drop: false }` [INFO] [stdout] e068eba6f4b8ae62233a410571d35b7912b1e5cbe7aa7540c34680939cd0848f