[INFO] cloning repository https://github.com/Axect/Galmorph [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Axect/Galmorph" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 21de14073b013984b7f1daaaffb0d32e045eddb8 [INFO] testing Axect/Galmorph against try#eafdee2dfae8c2233b74f98b123308be7ccefcc6 for pr-79296 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAxect%2FGalmorph" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Axect/Galmorph on toolchain eafdee2dfae8c2233b74f98b123308be7ccefcc6 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Axect/Galmorph [INFO] finished tweaking git repo https://github.com/Axect/Galmorph [INFO] tweaked toml for git repo https://github.com/Axect/Galmorph written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/Axect/Galmorph already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded netcdf-sys v0.3.2 [INFO] [stderr] Downloaded netcdf v0.5.1 [INFO] [stderr] Downloaded fitsio v0.16.0 [INFO] [stderr] Downloaded puruda-macro v0.1.1 [INFO] [stderr] Downloaded fitsio-sys v0.3.0 [INFO] [stderr] Downloaded peroxide v0.27.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 0330d312fff531fe0f0378a36ef9e6c931f1870c9bc9fe982971643f768d9acb [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "0330d312fff531fe0f0378a36ef9e6c931f1870c9bc9fe982971643f768d9acb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0330d312fff531fe0f0378a36ef9e6c931f1870c9bc9fe982971643f768d9acb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0330d312fff531fe0f0378a36ef9e6c931f1870c9bc9fe982971643f768d9acb", kill_on_drop: false }` [INFO] [stdout] 0330d312fff531fe0f0378a36ef9e6c931f1870c9bc9fe982971643f768d9acb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+eafdee2dfae8c2233b74f98b123308be7ccefcc6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 88496daa1caba361717c0476c866288ff56262c5352e050efa5f808d859bf18e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "88496daa1caba361717c0476c866288ff56262c5352e050efa5f808d859bf18e", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.79 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling regex-syntax v0.6.19 [INFO] [stderr] Compiling cc v1.0.61 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling netcdf-sys v0.3.2 [INFO] [stderr] Compiling peroxide v0.27.0 [INFO] [stderr] Compiling puruda-macro v0.1.1 [INFO] [stderr] Compiling order-stat v0.1.3 [INFO] [stderr] Compiling puruspe v0.1.4 [INFO] [stderr] Compiling peroxide-ad v0.1.4 [INFO] [stderr] Compiling libloading v0.6.4 [INFO] [stderr] Compiling fitsio-sys v0.3.0 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling lapack-sys v0.12.1 [INFO] [stderr] Compiling blas-sys v0.7.1 [INFO] [stderr] Compiling fitsio v0.16.0 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling blas v0.20.0 [INFO] [stderr] Compiling lapack v0.16.0 [INFO] [stderr] Compiling puruda v0.1.0 [INFO] [stderr] Compiling regex v1.4.0 [INFO] [stderr] Compiling rand_distr v0.3.0 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-21a7d38286e1802f/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x561e82797470 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x561e82797470 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x561e82797470 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x561e82797470 - ::fmt::h7881e3a580134f9a [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x561e827b6d1c - core::fmt::write::h1857a60b204f1b6a [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/fmt/mod.rs:1078:17 [INFO] [stderr] 5: 0x561e82793d82 - std::io::Write::write_fmt::h24485de26f355188 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/io/mod.rs:1519:15 [INFO] [stderr] 6: 0x561e82799a95 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x561e82799a95 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x561e82799a95 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x561e827995ea - std::panicking::default_hook::hb08853b392b9404b [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x561e8279a231 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x561e8272010e - std::panicking::begin_panic::{{closure}}::h76b35714618761bb [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x561e8272da59 - std::sys_common::backtrace::__rust_end_short_backtrace::h43e56652d8a81ced [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x561e8272003b - std::panicking::begin_panic::h161830976b37525e [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x561e8257205b - build_script_build::LibrarySearcher::try_locate_hdf5_library::hcc76b9dd8b5219bc [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x561e825738c3 - build_script_build::main::h79795d67c7ec999e [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x561e8257982b - core::ops::function::FnOnce::call_once::h62de3dfd60928517 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x561e8257f47e - std::sys_common::backtrace::__rust_begin_short_backtrace::h1a585868ce560ea0 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x561e8257ea21 - std::rt::lang_start::{{closure}}::h4afc62ba39eb101f [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x561e8279a657 - core::ops::function::impls:: for &F>::call_once::h194d6aa01fb6b594 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x561e8279a657 - std::panicking::try::do_call::h4ef477456776cccb [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x561e8279a657 - std::panicking::try::h7f2121b6bb3bbca4 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x561e8279a657 - std::panic::catch_unwind::he974d0ca04309948 [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/panic.rs:396:14 [INFO] [stderr] 23: 0x561e8279a657 - std::rt::lang_start_internal::h36e9e78490120b9f [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x561e8257e9f7 - std::rt::lang_start::hdb7cae4e964ce66d [INFO] [stderr] at /rustc/eafdee2dfae8c2233b74f98b123308be7ccefcc6/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x561e82574f0a - main [INFO] [stderr] 26: 0x7f64f33780b3 - __libc_start_main [INFO] [stderr] 27: 0x561e8256d0be - _start [INFO] [stderr] 28: 0x0 - [INFO] running `Command { std: "docker" "inspect" "88496daa1caba361717c0476c866288ff56262c5352e050efa5f808d859bf18e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "88496daa1caba361717c0476c866288ff56262c5352e050efa5f808d859bf18e", kill_on_drop: false }` [INFO] [stdout] 88496daa1caba361717c0476c866288ff56262c5352e050efa5f808d859bf18e