[INFO] fetching crate rumi 0.2.1...
[INFO] testing rumi-0.2.1 against master#5d5ff84130da0d74c6ece368dbe821d8f83fa526 for pr-79296
[INFO] extracting crate rumi 0.2.1 into /workspace/builds/worker-8/source
[INFO] validating manifest of crates.io crate rumi 0.2.1 on toolchain 5d5ff84130da0d74c6ece368dbe821d8f83fa526
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate rumi 0.2.1
[INFO] finished tweaking crates.io crate rumi 0.2.1
[INFO] tweaked toml for crates.io crate rumi 0.2.1 written to /workspace/builds/worker-8/source/Cargo.toml
[INFO] crate crates.io crate rumi 0.2.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] dd2b8af1806dd79a65190f174edde826a53d163a353508fc7d85dbfa074d9f14
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "dd2b8af1806dd79a65190f174edde826a53d163a353508fc7d85dbfa074d9f14", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "dd2b8af1806dd79a65190f174edde826a53d163a353508fc7d85dbfa074d9f14", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dd2b8af1806dd79a65190f174edde826a53d163a353508fc7d85dbfa074d9f14", kill_on_drop: false }`
[INFO] [stdout] dd2b8af1806dd79a65190f174edde826a53d163a353508fc7d85dbfa074d9f14
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] ab281b2b4c64307c5664148c3105216762460727b58faba98729649c648bb1bb
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "ab281b2b4c64307c5664148c3105216762460727b58faba98729649c648bb1bb", kill_on_drop: false }`
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]    Compiling version_check v0.1.5
[INFO] [stderr]    Compiling glob v0.2.11
[INFO] [stderr]    Compiling log v0.4.7
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.6
[INFO] [stderr]    Compiling syn v0.15.39
[INFO] [stderr]    Compiling unicode-width v0.1.5
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling bindgen v0.51.1
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling doc-comment v0.3.1
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling matches v0.1.8
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling basebits v1.2.0
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling backtrace-sys v0.1.32
[INFO] [stderr]    Compiling bzip2-sys v0.1.7
[INFO] [stderr]    Compiling humantime v1.2.0
[INFO] [stderr]    Compiling lzma-sys v0.1.14
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling fs-utils v1.1.1
[INFO] [stderr]    Compiling unicode-bidi v0.3.4
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling crossbeam-utils v0.6.6
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]    Compiling which v3.1.0
[INFO] [stderr]    Compiling rustc-hash v1.0.1
[INFO] [stderr]    Compiling regex v1.3.1
[INFO] [stderr]    Compiling clap v2.33.0
[INFO] [stderr]    Compiling idna v0.2.0
[INFO] [stderr]    Compiling crossbeam-queue v0.1.2
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]    Compiling clang-sys v0.28.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling backtrace v0.3.40
[INFO] [stderr]    Compiling memoffset v0.5.1
[INFO] [stderr]    Compiling quote v1.0.2
[INFO] [stderr]    Compiling url v2.1.0
[INFO] [stderr]    Compiling crossbeam-epoch v0.7.2
[INFO] [stderr]    Compiling cexpr v0.3.5
[INFO] [stderr]    Compiling crossbeam-deque v0.6.3
[INFO] [stderr]    Compiling rayon-core v1.5.0
[INFO] [stderr]    Compiling env_logger v0.6.2
[INFO] [stderr]    Compiling rayon v1.1.0
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]    Compiling serde_derive v1.0.97
[INFO] [stderr]    Compiling snafu v0.5.0
[INFO] [stderr]    Compiling rust-htslib v0.26.0
[INFO] [stderr]    Compiling bio-types v0.5.1
[INFO] [stderr]    Compiling rumi v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 27s
[INFO] running `Command { std: "docker" "inspect" "ab281b2b4c64307c5664148c3105216762460727b58faba98729649c648bb1bb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ab281b2b4c64307c5664148c3105216762460727b58faba98729649c648bb1bb", kill_on_drop: false }`
[INFO] [stdout] ab281b2b4c64307c5664148c3105216762460727b58faba98729649c648bb1bb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] bdba74476e0cfeeaff47d93fe65d5c6e75510b811cdb8cca877ceb50e524cfbe
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "bdba74476e0cfeeaff47d93fe65d5c6e75510b811cdb8cca877ceb50e524cfbe", kill_on_drop: false }`
[INFO] [stderr]    Compiling rumi v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.99s
[INFO] running `Command { std: "docker" "inspect" "bdba74476e0cfeeaff47d93fe65d5c6e75510b811cdb8cca877ceb50e524cfbe", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bdba74476e0cfeeaff47d93fe65d5c6e75510b811cdb8cca877ceb50e524cfbe", kill_on_drop: false }`
[INFO] [stdout] bdba74476e0cfeeaff47d93fe65d5c6e75510b811cdb8cca877ceb50e524cfbe
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 0a68e5ba23f7c3d546d97476928439fb2242efe29331a8e36168ee5245c2c14d
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "0a68e5ba23f7c3d546d97476928439fb2242efe29331a8e36168ee5245c2c14d", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.05s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/rumi_lib-c88d72958419e05d
[INFO] [stdout] 
[INFO] [stdout] running 7 tests
[INFO] [stdout] test test::test_determine_umi ... ok
[INFO] [stdout] test test::test_graph_small ... ok
[INFO] [stdout] test test::test_graph_umi ... ok
[INFO] [stdout] test test::test_group_reads_small ... ok
[INFO] [stdout] test test::test_group_reads_complex ... ok
[INFO] [stdout] test test::test_read_groups_cigars ... ok
[INFO] [stdout] test test::test_read_groups_umi_tools ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/rumi-c704a9de0d15b26f
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests rumi_lib
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "0a68e5ba23f7c3d546d97476928439fb2242efe29331a8e36168ee5245c2c14d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0a68e5ba23f7c3d546d97476928439fb2242efe29331a8e36168ee5245c2c14d", kill_on_drop: false }`
[INFO] [stdout] 0a68e5ba23f7c3d546d97476928439fb2242efe29331a8e36168ee5245c2c14d