[INFO] fetching crate phyloalifold 0.1.3...
[INFO] testing phyloalifold-0.1.3 against master#5d5ff84130da0d74c6ece368dbe821d8f83fa526 for pr-79296
[INFO] extracting crate phyloalifold 0.1.3 into /workspace/builds/worker-0/source
[INFO] validating manifest of crates.io crate phyloalifold 0.1.3 on toolchain 5d5ff84130da0d74c6ece368dbe821d8f83fa526
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate phyloalifold 0.1.3
[INFO] finished tweaking crates.io crate phyloalifold 0.1.3
[INFO] tweaked toml for crates.io crate phyloalifold 0.1.3 written to /workspace/builds/worker-0/source/Cargo.toml
[INFO] crate crates.io crate phyloalifold 0.1.3 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 0b0c466a2f2b2be2c94caa52328f999f2d9df92ffdb91a04a25d94dc4ced46cd
[INFO] running `Command { std: "docker" "start" "-a" "0b0c466a2f2b2be2c94caa52328f999f2d9df92ffdb91a04a25d94dc4ced46cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "0b0c466a2f2b2be2c94caa52328f999f2d9df92ffdb91a04a25d94dc4ced46cd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0b0c466a2f2b2be2c94caa52328f999f2d9df92ffdb91a04a25d94dc4ced46cd", kill_on_drop: false }`
[INFO] [stdout] 0b0c466a2f2b2be2c94caa52328f999f2d9df92ffdb91a04a25d94dc4ced46cd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c2b168ff5134d682317d308b1051dba6cd3bfd57ef3e85d9dfb5e6c4c9a4963e
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "c2b168ff5134d682317d308b1051dba6cd3bfd57ef3e85d9dfb5e6c4c9a4963e", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.9
[INFO] [stderr]    Compiling syn v1.0.16
[INFO] [stderr]    Compiling serde v1.0.104
[INFO] [stderr]    Compiling libc v0.2.67
[INFO] [stderr]    Compiling either v1.5.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling ryu v1.0.2
[INFO] [stderr]    Compiling void v1.0.2
[INFO] [stderr]    Compiling rawpointer v0.1.0
[INFO] [stderr]    Compiling ndarray v0.9.1
[INFO] [stderr]    Compiling bv v0.7.4
[INFO] [stderr]    Compiling ucd-util v0.1.7
[INFO] [stderr]    Compiling bit-vec v0.4.4
[INFO] [stderr]    Compiling unicode-width v0.1.7
[INFO] [stderr]    Compiling bytecount v0.3.2
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling scoped_threadpool v0.1.9
[INFO] [stderr]    Compiling num-traits v0.2.11
[INFO] [stderr]    Compiling num-integer v0.1.42
[INFO] [stderr]    Compiling byteorder v1.3.4
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]    Compiling unreachable v1.0.0
[INFO] [stderr]    Compiling getopts v0.2.21
[INFO] [stderr]    Compiling itertools v0.6.5
[INFO] [stderr]    Compiling itertools v0.8.2
[INFO] [stderr]    Compiling itertools v0.7.11
[INFO] [stderr]    Compiling regex-syntax v0.5.6
[INFO] [stderr]    Compiling bit-set v0.4.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling aho-corasick v0.6.10
[INFO] [stderr]    Compiling regex-automata v0.1.9
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling time v0.1.42
[INFO] [stderr]    Compiling num_cpus v1.12.0
[INFO] [stderr]    Compiling quote v1.0.3
[INFO] [stderr]    Compiling bio-seq-algos v0.1.15
[INFO] [stderr]    Compiling num-traits v0.1.43
[INFO] [stderr]    Compiling num-complex v0.1.43
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v0.5.2
[INFO] [stderr]    Compiling rna-ss-params v0.1.16
[INFO] [stderr]    Compiling regex v0.2.11
[INFO] [stderr]    Compiling serde_derive v1.0.104
[INFO] [stderr]    Compiling bstr v0.2.11
[INFO] [stderr]    Compiling vec_map v0.8.1
[INFO] [stderr]    Compiling multimap v0.4.0
[INFO] [stderr]    Compiling csv v1.1.3
[INFO] [stderr]    Compiling bio v0.20.3
[INFO] [stderr]    Compiling rna-algos v0.1.14
[INFO] [stderr]    Compiling phyloprob v0.1.2
[INFO] [stderr]    Compiling phylofold v0.1.2
[INFO] [stderr]    Compiling phyloalifold v0.1.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 1m 21s
[INFO] running `Command { std: "docker" "inspect" "c2b168ff5134d682317d308b1051dba6cd3bfd57ef3e85d9dfb5e6c4c9a4963e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c2b168ff5134d682317d308b1051dba6cd3bfd57ef3e85d9dfb5e6c4c9a4963e", kill_on_drop: false }`
[INFO] [stdout] c2b168ff5134d682317d308b1051dba6cd3bfd57ef3e85d9dfb5e6c4c9a4963e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d83fc5fdbc28a356455177bcec9012961c3da5a58feefb1a0ca51240fbf23e48
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "d83fc5fdbc28a356455177bcec9012961c3da5a58feefb1a0ca51240fbf23e48", kill_on_drop: false }`
[INFO] [stderr]    Compiling phyloalifold v0.1.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 1.22s
[INFO] running `Command { std: "docker" "inspect" "d83fc5fdbc28a356455177bcec9012961c3da5a58feefb1a0ca51240fbf23e48", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d83fc5fdbc28a356455177bcec9012961c3da5a58feefb1a0ca51240fbf23e48", kill_on_drop: false }`
[INFO] [stdout] d83fc5fdbc28a356455177bcec9012961c3da5a58feefb1a0ca51240fbf23e48
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 6289150d9d86d0840c533774b7d4417681db30df5a0794ca072a98cdd0765e73
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "6289150d9d86d0840c533774b7d4417681db30df5a0794ca072a98cdd0765e73", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.10s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/phyloalifold-fdaf82bf2bcf9fc2
[INFO] [stdout] 
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/phyloalifold-3c3fe4afce9ba178
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests phyloalifold
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "6289150d9d86d0840c533774b7d4417681db30df5a0794ca072a98cdd0765e73", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6289150d9d86d0840c533774b7d4417681db30df5a0794ca072a98cdd0765e73", kill_on_drop: false }`
[INFO] [stdout] 6289150d9d86d0840c533774b7d4417681db30df5a0794ca072a98cdd0765e73