[INFO] fetching crate genovo 0.1.2... [INFO] testing genovo-0.1.2 against master#5d5ff84130da0d74c6ece368dbe821d8f83fa526 for pr-79296 [INFO] extracting crate genovo 0.1.2 into /workspace/builds/worker-13/source [INFO] validating manifest of crates.io crate genovo 0.1.2 on toolchain 5d5ff84130da0d74c6ece368dbe821d8f83fa526 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate genovo 0.1.2 [INFO] finished tweaking crates.io crate genovo 0.1.2 [INFO] tweaked toml for crates.io crate genovo 0.1.2 written to /workspace/builds/worker-13/source/Cargo.toml [INFO] crate crates.io crate genovo 0.1.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c30e4940e336189043881c6902467fbf3ef9a4fc76bf58367ce129fbef37d8c7 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "c30e4940e336189043881c6902467fbf3ef9a4fc76bf58367ce129fbef37d8c7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c30e4940e336189043881c6902467fbf3ef9a4fc76bf58367ce129fbef37d8c7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c30e4940e336189043881c6902467fbf3ef9a4fc76bf58367ce129fbef37d8c7", kill_on_drop: false }` [INFO] [stdout] c30e4940e336189043881c6902467fbf3ef9a4fc76bf58367ce129fbef37d8c7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3610592c225b139dfb49b2a344599bd208e778be0ef4ba65fde3380b4a003a99 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3610592c225b139dfb49b2a344599bd208e778be0ef4ba65fde3380b4a003a99", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Compiling syn v1.0.36 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling ppv-lite86 v0.2.8 [INFO] [stderr] Compiling tabfile v0.2.1 [INFO] [stderr] Compiling anyhow v1.0.32 [INFO] [stderr] Compiling twobit v0.1.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling miniz_oxide v0.4.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling pattern_partition_prediction v0.1.0 [INFO] [stderr] Compiling clap v2.33.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling flate2 v1.0.16 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling thiserror-impl v1.0.20 [INFO] [stderr] Compiling serde_repr v0.1.6 [INFO] [stderr] Compiling thiserror v1.0.20 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling mutexpect v0.2.0 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling genovo v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 12s [INFO] running `Command { std: "docker" "inspect" "3610592c225b139dfb49b2a344599bd208e778be0ef4ba65fde3380b4a003a99", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3610592c225b139dfb49b2a344599bd208e778be0ef4ba65fde3380b4a003a99", kill_on_drop: false }` [INFO] [stdout] 3610592c225b139dfb49b2a344599bd208e778be0ef4ba65fde3380b4a003a99 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e98f05df8d89aa2148646395dc2bab90a94775460652e84fa05e0f689b90bbf1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e98f05df8d89aa2148646395dc2bab90a94775460652e84fa05e0f689b90bbf1", kill_on_drop: false }` [INFO] [stderr] Compiling genovo v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 5.78s [INFO] running `Command { std: "docker" "inspect" "e98f05df8d89aa2148646395dc2bab90a94775460652e84fa05e0f689b90bbf1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e98f05df8d89aa2148646395dc2bab90a94775460652e84fa05e0f689b90bbf1", kill_on_drop: false }` [INFO] [stdout] e98f05df8d89aa2148646395dc2bab90a94775460652e84fa05e0f689b90bbf1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 8340fa8497a5cef06c5b0917ec010f35c7055598f83a389e9ed9e8f4689a0b08 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8340fa8497a5cef06c5b0917ec010f35c7055598f83a389e9ed9e8f4689a0b08", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.27s [INFO] [stdout] running 7 tests [INFO] [stderr] Running /opt/rustwide/target/debug/deps/genovo-320a00adb0801b84 [INFO] [stdout] test counts::tests::test_p_values ... ok [INFO] [stdout] test observed::tests::test_observed_mutations_io ... ok [INFO] [stdout] test transform::tests::test_region_file_io ... ok [INFO] [stdout] test enumerate::tests::test_possible_mutations_io ... ok [INFO] [stdout] test sample::tests::test_sampled_mutations_io ... ok [INFO] [stdout] test transform::tests::test_gff3_io ... ok [INFO] [stdout] test expect::tests::test_expected_mutations_io ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "8340fa8497a5cef06c5b0917ec010f35c7055598f83a389e9ed9e8f4689a0b08", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8340fa8497a5cef06c5b0917ec010f35c7055598f83a389e9ed9e8f4689a0b08", kill_on_drop: false }` [INFO] [stdout] 8340fa8497a5cef06c5b0917ec010f35c7055598f83a389e9ed9e8f4689a0b08