[INFO] fetching crate diffuse 0.1.1... [INFO] testing diffuse-0.1.1 against master#5d5ff84130da0d74c6ece368dbe821d8f83fa526 for pr-79296 [INFO] extracting crate diffuse 0.1.1 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate diffuse 0.1.1 on toolchain 5d5ff84130da0d74c6ece368dbe821d8f83fa526 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate diffuse 0.1.1 [INFO] finished tweaking crates.io crate diffuse 0.1.1 [INFO] tweaked toml for crates.io crate diffuse 0.1.1 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate crates.io crate diffuse 0.1.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1d4d2df626e996e479825544c535100db6cb66d017a3f4bfea412a69eb6c14fb [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "1d4d2df626e996e479825544c535100db6cb66d017a3f4bfea412a69eb6c14fb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1d4d2df626e996e479825544c535100db6cb66d017a3f4bfea412a69eb6c14fb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1d4d2df626e996e479825544c535100db6cb66d017a3f4bfea412a69eb6c14fb", kill_on_drop: false }` [INFO] [stdout] 1d4d2df626e996e479825544c535100db6cb66d017a3f4bfea412a69eb6c14fb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 66b0c3d8d2fd3689252f55ad68c9c96bb2e3289381fed31a627692406653656f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "66b0c3d8d2fd3689252f55ad68c9c96bb2e3289381fed31a627692406653656f", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling syn v1.0.48 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling siphasher v0.3.3 [INFO] [stderr] Compiling cc v1.0.62 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling ucd-trie v0.1.3 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling netcdf-sys v0.3.3 [INFO] [stderr] Compiling adler32 v1.2.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling regex-syntax v0.6.21 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling bytemuck v1.4.1 [INFO] [stderr] Compiling hashbrown v0.9.1 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Compiling paste v1.0.2 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling number_prefix v0.3.0 [INFO] [stderr] Compiling slice-of-array v0.2.1 [INFO] [stderr] Compiling hex v0.4.2 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling crossbeam-utils v0.8.0 [INFO] [stderr] Compiling memoffset v0.5.6 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling num-rational v0.3.2 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling generic-array v0.14.4 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling phf_shared v0.8.0 [INFO] [stderr] Compiling pest v2.1.3 [INFO] [stderr] Compiling miniz_oxide v0.3.7 [INFO] [stderr] Compiling rgb v0.8.25 [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling typenum v1.12.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling phf v0.8.0 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling ansi_rgb v0.2.0 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling deflate v0.8.6 [INFO] [stderr] Compiling num_cpus v1.13.0 [INFO] [stderr] Compiling terminal_size v0.1.13 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling regex v1.4.2 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling pest_meta v2.1.3 [INFO] [stderr] Compiling crossbeam-epoch v0.9.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.0 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling colored v2.0.0 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling png v0.16.7 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling approx v0.4.0 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling noisy_float v0.1.13 [INFO] [stderr] Compiling rand_distr v0.3.0 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling console v0.13.0 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Compiling palette v0.5.0 [INFO] [stderr] Compiling indicatif v0.15.0 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Compiling ndarray-parallel v0.9.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-39ecfd15456369e6/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x556993f55650 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x556993f55650 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x556993f55650 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x556993f55650 - ::fmt::h7881e3a580134f9a [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x556993f74efc - core::fmt::write::h1857a60b204f1b6a [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stderr] 5: 0x556993f51f62 - std::io::Write::write_fmt::h24485de26f355188 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stderr] 6: 0x556993f57c75 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x556993f57c75 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x556993f57c75 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x556993f577ca - std::panicking::default_hook::hb08853b392b9404b [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x556993f58411 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x556993eb2aae - std::panicking::begin_panic::{{closure}}::hc807a3ac1ad8da01 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:520:9 [INFO] [stderr] 12: 0x556993e857f9 - std::sys_common::backtrace::__rust_end_short_backtrace::h82b057c8aaaff3c9 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x556993eb29db - std::panicking::begin_panic::hc7b6a23cae20e381 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:519:12 [INFO] [stderr] 14: 0x556993d3305b - build_script_build::LibrarySearcher::try_locate_hdf5_library::hfb8bdd9ca559e541 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x556993d348c3 - build_script_build::main::h8176117994d32a7f [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x556993d3ae4b - core::ops::function::FnOnce::call_once::hffcb62ada297cf00 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x556993d41a6e - std::sys_common::backtrace::__rust_begin_short_backtrace::h6bd4e12cc2a9008e [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x556993d3f8e1 - std::rt::lang_start::{{closure}}::h656f72861eea9466 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x556993f58837 - core::ops::function::impls:: for &F>::call_once::h194d6aa01fb6b594 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x556993f58837 - std::panicking::try::do_call::h4ef477456776cccb [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stderr] 21: 0x556993f58837 - std::panicking::try::h7f2121b6bb3bbca4 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stderr] 22: 0x556993f58837 - std::panic::catch_unwind::he974d0ca04309948 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stderr] 23: 0x556993f58837 - std::rt::lang_start_internal::h36e9e78490120b9f [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x556993d3f8b7 - std::rt::lang_start::h7db7b2f4e59f2ec9 [INFO] [stderr] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x556993d35f0a - main [INFO] [stderr] 26: 0x7facd33cb0b3 - __libc_start_main [INFO] [stderr] 27: 0x556993d2e0be - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "66b0c3d8d2fd3689252f55ad68c9c96bb2e3289381fed31a627692406653656f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "66b0c3d8d2fd3689252f55ad68c9c96bb2e3289381fed31a627692406653656f", kill_on_drop: false }` [INFO] [stdout] 66b0c3d8d2fd3689252f55ad68c9c96bb2e3289381fed31a627692406653656f