[INFO] fetching crate checkm 0.1.0...
[INFO] testing checkm-0.1.0 against master#5d5ff84130da0d74c6ece368dbe821d8f83fa526 for pr-79296
[INFO] extracting crate checkm 0.1.0 into /workspace/builds/worker-9/source
[INFO] validating manifest of crates.io crate checkm 0.1.0 on toolchain 5d5ff84130da0d74c6ece368dbe821d8f83fa526
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate checkm 0.1.0
[INFO] finished tweaking crates.io crate checkm 0.1.0
[INFO] tweaked toml for crates.io crate checkm 0.1.0 written to /workspace/builds/worker-9/source/Cargo.toml
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 56f046c7ac5e0712e8cf501650d07d20caad39c710f76259dc6d707f67b46ca3
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "56f046c7ac5e0712e8cf501650d07d20caad39c710f76259dc6d707f67b46ca3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "56f046c7ac5e0712e8cf501650d07d20caad39c710f76259dc6d707f67b46ca3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "56f046c7ac5e0712e8cf501650d07d20caad39c710f76259dc6d707f67b46ca3", kill_on_drop: false }`
[INFO] [stdout] 56f046c7ac5e0712e8cf501650d07d20caad39c710f76259dc6d707f67b46ca3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b330f77bddaad59881bbf96bbeb2a5116b1f716ec8fb153294f69f08302fd9a5
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "b330f77bddaad59881bbf96bbeb2a5116b1f716ec8fb153294f69f08302fd9a5", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.80
[INFO] [stderr]    Compiling serde v1.0.117
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]    Compiling bstr v0.2.14
[INFO] [stderr]    Compiling csv v1.1.5
[INFO] [stderr]    Compiling checkm v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 15.24s
[INFO] running `Command { std: "docker" "inspect" "b330f77bddaad59881bbf96bbeb2a5116b1f716ec8fb153294f69f08302fd9a5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b330f77bddaad59881bbf96bbeb2a5116b1f716ec8fb153294f69f08302fd9a5", kill_on_drop: false }`
[INFO] [stdout] b330f77bddaad59881bbf96bbeb2a5116b1f716ec8fb153294f69f08302fd9a5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3c92ae28ab17474ec7248e419a33b5acea085358866fce1ca6644b6abd9e75bc
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "3c92ae28ab17474ec7248e419a33b5acea085358866fce1ca6644b6abd9e75bc", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]    Compiling checkm v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 3.45s
[INFO] running `Command { std: "docker" "inspect" "3c92ae28ab17474ec7248e419a33b5acea085358866fce1ca6644b6abd9e75bc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3c92ae28ab17474ec7248e419a33b5acea085358866fce1ca6644b6abd9e75bc", kill_on_drop: false }`
[INFO] [stdout] 3c92ae28ab17474ec7248e419a33b5acea085358866fce1ca6644b6abd9e75bc
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] a75577d7cba20dda42e0d05f3aeb7f67d1da4813a5234b0a007cd4f13a80555f
[INFO] running `Command { std: "docker" "start" "-a" "a75577d7cba20dda42e0d05f3aeb7f67d1da4813a5234b0a007cd4f13a80555f", kill_on_drop: false }`
[INFO] [stderr]     Finished test [unoptimized + debuginfo] target(s) in 0.04s
[INFO] [stderr]      Running /opt/rustwide/target/debug/deps/checkm-85e5d64118645eb2
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test test::test_retrieve ... ok
[INFO] [stdout] test test::test_fasta_ordering_4times_min_completeness ... ok
[INFO] [stdout] test test::test_fasta_ordering_4times ... ok
[INFO] [stdout] test test::test_ordering_5times ... ok
[INFO] [stdout] test test::test_ordering_4times ... ok
[INFO] [stdout] test test::test_good_quality_genome_names ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests checkm
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "a75577d7cba20dda42e0d05f3aeb7f67d1da4813a5234b0a007cd4f13a80555f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a75577d7cba20dda42e0d05f3aeb7f67d1da4813a5234b0a007cd4f13a80555f", kill_on_drop: false }`
[INFO] [stdout] a75577d7cba20dda42e0d05f3aeb7f67d1da4813a5234b0a007cd4f13a80555f