[INFO] cloning repository https://github.com/chfi/rust-qtlreaper [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/rust-qtlreaper" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8d650921ec4aec63c42068de58b91579228f57b1 [INFO] testing chfi/rust-qtlreaper against master#5d5ff84130da0d74c6ece368dbe821d8f83fa526 for pr-79296 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Frust-qtlreaper" "/workspace/builds/worker-7/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/chfi/rust-qtlreaper on toolchain 5d5ff84130da0d74c6ece368dbe821d8f83fa526 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/chfi/rust-qtlreaper [INFO] finished tweaking git repo https://github.com/chfi/rust-qtlreaper [INFO] tweaked toml for git repo https://github.com/chfi/rust-qtlreaper written to /workspace/builds/worker-7/source/Cargo.toml [INFO] crate git repo https://github.com/chfi/rust-qtlreaper already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] error: the lock file /workspace/builds/worker-7/source/Cargo.lock needs to be updated but --locked was passed to prevent this [INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag. [INFO] the lockfile is outdated, regenerating it [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5e87f7c5facda0304dded291a7d42620995e10cc7cc74e6271ca012dce822914 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "5e87f7c5facda0304dded291a7d42620995e10cc7cc74e6271ca012dce822914", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5e87f7c5facda0304dded291a7d42620995e10cc7cc74e6271ca012dce822914", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5e87f7c5facda0304dded291a7d42620995e10cc7cc74e6271ca012dce822914", kill_on_drop: false }` [INFO] [stdout] 5e87f7c5facda0304dded291a7d42620995e10cc7cc74e6271ca012dce822914 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] cd40172fbb175b1e1a897b5f8011d4553815980ede0ee6f021f5666e5cba837f [INFO] running `Command { std: "docker" "start" "-a" "cd40172fbb175b1e1a897b5f8011d4553815980ede0ee6f021f5666e5cba837f", kill_on_drop: false }` [INFO] [stderr] Compiling const_fn v0.4.3 [INFO] [stderr] Compiling syn v1.0.53 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling crossbeam-utils v0.8.1 [INFO] [stderr] Compiling memoffset v0.6.1 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling crossbeam-epoch v0.9.1 [INFO] [stderr] Compiling crossbeam-channel v0.5.0 [INFO] [stderr] Compiling crossbeam-deque v0.8.0 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Compiling structopt-derive v0.2.18 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling structopt v0.2.18 [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/lib.rs:5:22 [INFO] [stdout] | [INFO] [stdout] 5 | #[macro_use(s, azip, array)] [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stdout] --> src/regression.rs:5:1 [INFO] [stdout] | [INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `regression_2n_variance` [INFO] [stdout] --> src/regression.rs:250:4 [INFO] [stdout] | [INFO] [stdout] 250 | fn regression_2n_variance( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 12s [INFO] running `Command { std: "docker" "inspect" "cd40172fbb175b1e1a897b5f8011d4553815980ede0ee6f021f5666e5cba837f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cd40172fbb175b1e1a897b5f8011d4553815980ede0ee6f021f5666e5cba837f", kill_on_drop: false }` [INFO] [stdout] cd40172fbb175b1e1a897b5f8011d4553815980ede0ee6f021f5666e5cba837f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3dd035309e0d26b3356766e926d0aa4c617b1e951ab7722cf7fd5b0a31a93b4c [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3dd035309e0d26b3356766e926d0aa4c617b1e951ab7722cf7fd5b0a31a93b4c", kill_on_drop: false }` [INFO] [stdout] warning: unused `#[macro_use]` import [INFO] [stdout] --> src/lib.rs:5:22 [INFO] [stdout] | [INFO] [stdout] 5 | #[macro_use(s, azip, array)] [INFO] [stdout] | ^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stdout] --> src/regression.rs:5:1 [INFO] [stdout] | [INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `regression_2n_variance` [INFO] [stdout] --> src/regression.rs:250:4 [INFO] [stdout] | [INFO] [stdout] 250 | fn regression_2n_variance( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 3 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling qtlreaper v0.1.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stdout] --> src/regression.rs:5:1 [INFO] [stdout] | [INFO] [stdout] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `regression_2n_variance` [INFO] [stdout] --> src/regression.rs:250:4 [INFO] [stdout] | [INFO] [stdout] 250 | fn regression_2n_variance( [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.16s [INFO] running `Command { std: "docker" "inspect" "3dd035309e0d26b3356766e926d0aa4c617b1e951ab7722cf7fd5b0a31a93b4c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3dd035309e0d26b3356766e926d0aa4c617b1e951ab7722cf7fd5b0a31a93b4c", kill_on_drop: false }` [INFO] [stdout] 3dd035309e0d26b3356766e926d0aa4c617b1e951ab7722cf7fd5b0a31a93b4c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] dbf84f2fec5cf2e0799e1d38ed1f1c6dccb6eb530afecd88829a56c295793eda [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "dbf84f2fec5cf2e0799e1d38ed1f1c6dccb6eb530afecd88829a56c295793eda", kill_on_drop: false }` [INFO] [stderr] warning: unused `#[macro_use]` import [INFO] [stderr] --> src/lib.rs:5:22 [INFO] [stderr] | [INFO] [stderr] 5 | #[macro_use(s, azip, array)] [INFO] [stderr] | ^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stderr] --> src/regression.rs:5:1 [INFO] [stderr] | [INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: function is never used: `regression_2n_variance` [INFO] [stderr] --> src/regression.rs:250:4 [INFO] [stderr] | [INFO] [stderr] 250 | fn regression_2n_variance( [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 3 warnings emitted [INFO] [stderr] [INFO] [stderr] warning: constant is never used: `PERMUTATION_TESTSIZE` [INFO] [stderr] --> src/regression.rs:5:1 [INFO] [stderr] | [INFO] [stderr] 5 | const PERMUTATION_TESTSIZE: usize = 1000; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: function is never used: `regression_2n_variance` [INFO] [stderr] --> src/regression.rs:250:4 [INFO] [stderr] | [INFO] [stderr] 250 | fn regression_2n_variance( [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: 2 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.06s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/qtlreaper-d90fa2ddd1c3e90e [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test geneobject::tests::it_can_parse_metadata ... ok [INFO] [stdout] test geneobject::tests::it_can_parse_header ... ok [INFO] [stderr] error: test failed, to rerun pass '--lib' [INFO] [stdout] test geneobject::tests::it_can_estimate_unknown_genotypes ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- geneobject::tests::it_can_estimate_unknown_genotypes stdout ---- [INFO] [stdout] thread 'geneobject::tests::it_can_estimate_unknown_genotypes' panicked at 'assertion failed: `(left == right)` [INFO] [stdout] left: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627406, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.32233300305265566, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`, [INFO] [stdout] right: `[Locus { dominance: None, genotype: [Mat, Mat, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-1.0, -1.0, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk1", centi_morgan: 10.0, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Pat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [-0.18523506128077272, 1.0, 0.9616255554798838] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk2", centi_morgan: 30.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Pat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.18906668494617707, 0.3421367343627405, 1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk3", centi_morgan: 40.1, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Unk, Unk, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [0.5826065314914579, -0.3223330030526561, 0.3223330030526552] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk4", centi_morgan: 50.2, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Unk] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -0.34213673436274084] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk5", centi_morgan: 60.3, mega_basepair: None, chromosome: "1" } }, Locus { dominance: None, genotype: [Pat, Mat, Mat] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, genoprob: [1.0, -1.0, -1.0] shape=[3], strides=[1], layout=C | F (0x3), const ndim=1, marker: Marker { name: "Mk6", centi_morgan: 70.1, mega_basepair: None, chromosome: "1" } }]`', src/geneobject.rs:895:9 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55f1744c3ab0 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55f1744c3ab0 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55f1744c3ab0 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55f1744c3ab0 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55f1744e75ac - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55f1744bff52 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55f1744c62e5 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55f1744c62e5 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55f1744c62e5 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55f1744c5e72 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55f1744c6a81 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55f1744c65c7 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55f1744c3f6c - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55f1744c6529 - rust_begin_unwind [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55f1744c64db - std::panicking::begin_panic_fmt::h37a25c59c4d54517 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:435:5 [INFO] [stdout] 15: 0x55f174451257 - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::h195931d6a716f322 [INFO] [stdout] at /opt/rustwide/workdir/src/geneobject.rs:895:9 [INFO] [stdout] 16: 0x55f17444f22a - qtlreaper::geneobject::tests::it_can_estimate_unknown_genotypes::{{closure}}::h1e53014d20ccd79a [INFO] [stdout] at /opt/rustwide/workdir/src/geneobject.rs:808:5 [INFO] [stdout] 17: 0x55f17444809e - core::ops::function::FnOnce::call_once::hf7c5c7bc78c0951f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 18: 0x55f174480983 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 19: 0x55f174480983 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:516:5 [INFO] [stdout] 20: 0x55f17447f078 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 21: 0x55f17447f078 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 22: 0x55f17447f078 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 23: 0x55f17447f078 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 24: 0x55f17447f078 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 25: 0x55f17447f078 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:538:18 [INFO] [stdout] 26: 0x55f17447f078 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:449:39 [INFO] [stdout] 27: 0x55f174459666 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 28: 0x55f17445de2d - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 29: 0x55f17445de2d - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 30: 0x55f17445de2d - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 31: 0x55f17445de2d - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 32: 0x55f17445de2d - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 33: 0x55f17445de2d - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 34: 0x55f17445de2d - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 35: 0x55f1744cc06a - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 36: 0x55f1744cc06a - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 37: 0x55f1744cc06a - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 38: 0x7fa74465b609 - start_thread [INFO] [stdout] 39: 0x7fa74442d293 - clone [INFO] [stdout] 40: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] geneobject::tests::it_can_estimate_unknown_genotypes [INFO] [stdout] [INFO] [stdout] test result: FAILED. 2 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "dbf84f2fec5cf2e0799e1d38ed1f1c6dccb6eb530afecd88829a56c295793eda", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "dbf84f2fec5cf2e0799e1d38ed1f1c6dccb6eb530afecd88829a56c295793eda", kill_on_drop: false }` [INFO] [stdout] dbf84f2fec5cf2e0799e1d38ed1f1c6dccb6eb530afecd88829a56c295793eda