[INFO] cloning repository https://github.com/Helkafen/vcf_pwm [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Helkafen/vcf_pwm" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8e5d5ed6ad5a45aeb3484eede816ff02f40acf3b [INFO] testing Helkafen/vcf_pwm against master#5d5ff84130da0d74c6ece368dbe821d8f83fa526 for pr-79296 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHelkafen%2Fvcf_pwm" "/workspace/builds/worker-4/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/Helkafen/vcf_pwm on toolchain 5d5ff84130da0d74c6ece368dbe821d8f83fa526 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] finished tweaking git repo https://github.com/Helkafen/vcf_pwm [INFO] tweaked toml for git repo https://github.com/Helkafen/vcf_pwm written to /workspace/builds/worker-4/source/Cargo.toml [INFO] crate git repo https://github.com/Helkafen/vcf_pwm already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] f406337d606f015ff85156d0825751ff1707ef27167625d7648620ea3203faae [INFO] running `Command { std: "docker" "start" "-a" "f406337d606f015ff85156d0825751ff1707ef27167625d7648620ea3203faae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f406337d606f015ff85156d0825751ff1707ef27167625d7648620ea3203faae", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f406337d606f015ff85156d0825751ff1707ef27167625d7648620ea3203faae", kill_on_drop: false }` [INFO] [stdout] f406337d606f015ff85156d0825751ff1707ef27167625d7648620ea3203faae [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 03ed0942115b0056d1859ee4d85d993e2af0158c5cb696be12c30a3af0b645c8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "03ed0942115b0056d1859ee4d85d993e2af0158c5cb696be12c30a3af0b645c8", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.66 [INFO] [stderr] Compiling cc v1.0.37 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling syn v0.15.39 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling serde v1.0.94 [INFO] [stderr] Compiling autocfg v0.1.4 [INFO] [stderr] Compiling cfg-if v0.1.9 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling glob v0.2.11 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling version_check v0.1.5 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling doc-comment v0.3.1 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling unicode-segmentation v1.3.0 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling owning_ref v0.2.4 [INFO] [stderr] Compiling ordermap v0.3.5 [INFO] [stderr] Compiling fixedbitset v0.1.9 [INFO] [stderr] Compiling bio v0.28.2 [INFO] [stderr] Compiling itoa v0.4.4 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling smallvec v0.3.4 [INFO] [stderr] Compiling futures v0.1.29 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling fnv v1.0.6 [INFO] [stderr] Compiling strum v0.13.0 [INFO] [stderr] Compiling crossbeam v0.2.12 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling log v0.4.6 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling itertools v0.8.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling num-traits v0.2.8 [INFO] [stderr] Compiling num-complex v0.2.3 [INFO] [stderr] Compiling num-integer v0.1.41 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling petgraph v0.4.13 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling rustc-hash v1.0.1 [INFO] [stderr] Compiling regex-automata v0.1.7 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling backtrace-sys v0.1.30 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling url v2.1.0 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling which v3.1.0 [INFO] [stderr] Compiling thread-id v3.3.0 [INFO] [stderr] Compiling time v0.1.42 [INFO] [stderr] Compiling subprocess v0.1.18 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling csv-core v0.1.6 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling parking_lot_core v0.2.14 [INFO] [stderr] Compiling backtrace v0.3.32 [INFO] [stderr] Compiling flate2 v1.0.9 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling parking_lot v0.3.8 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling bgzip v0.0.3 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling which v2.0.1 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling multiqueue v0.3.2 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling serde_derive v1.0.94 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling strum_macros v0.13.0 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling bstr v0.2.1 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling csv v1.1.1 [INFO] [stderr] Compiling rust-htslib v0.26.1 [INFO] [stderr] Compiling find-tfbs v1.0.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: variant is never constructed: `OtherPattern` [INFO] [stdout] --> src/types.rs:89:6 [INFO] [stdout] | [INFO] [stdout] 89 | OtherPattern { name: String, pattern_id: u16 } [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `contains` [INFO] [stdout] --> src/range.rs:23:12 [INFO] [stdout] | [INFO] [stdout] 23 | pub fn contains(&self, point: u64) -> bool { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 3m 58s [INFO] running `Command { std: "docker" "inspect" "03ed0942115b0056d1859ee4d85d993e2af0158c5cb696be12c30a3af0b645c8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "03ed0942115b0056d1859ee4d85d993e2af0158c5cb696be12c30a3af0b645c8", kill_on_drop: false }` [INFO] [stdout] 03ed0942115b0056d1859ee4d85d993e2af0158c5cb696be12c30a3af0b645c8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 28d653436772ecb0a8e573cf8f9274f456cdf2bf020b36bb0e3f780c37074eab [INFO] running `Command { std: "docker" "start" "-a" "28d653436772ecb0a8e573cf8f9274f456cdf2bf020b36bb0e3f780c37074eab", kill_on_drop: false }` [INFO] [stderr] Compiling scopeguard v0.3.3 [INFO] [stderr] Compiling memoffset v0.2.1 [INFO] [stderr] Compiling rand_core v0.4.0 [INFO] [stderr] Compiling same-file v1.0.4 [INFO] [stderr] Compiling cast v0.2.2 [INFO] [stderr] Compiling crossbeam-utils v0.6.5 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling serde_json v1.0.40 [INFO] [stderr] Compiling walkdir v2.2.8 [INFO] [stderr] Compiling crossbeam-epoch v0.7.1 [INFO] [stderr] Compiling crossbeam-queue v0.1.2 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling criterion-plot v0.3.1 [INFO] [stderr] Compiling rand_xoshiro v0.1.0 [INFO] [stderr] Compiling crossbeam-deque v0.7.1 [INFO] [stderr] Compiling rayon-core v1.6.0 [INFO] [stderr] Compiling tinytemplate v1.0.2 [INFO] [stderr] Compiling rayon v1.2.0 [INFO] [stderr] Compiling criterion v0.2.11 [INFO] [stderr] Compiling find-tfbs v1.0.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: variant is never constructed: `OtherPattern` [INFO] [stdout] --> src/types.rs:89:6 [INFO] [stdout] | [INFO] [stdout] 89 | OtherPattern { name: String, pattern_id: u16 } [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 37.95s [INFO] running `Command { std: "docker" "inspect" "28d653436772ecb0a8e573cf8f9274f456cdf2bf020b36bb0e3f780c37074eab", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "28d653436772ecb0a8e573cf8f9274f456cdf2bf020b36bb0e3f780c37074eab", kill_on_drop: false }` [INFO] [stdout] 28d653436772ecb0a8e573cf8f9274f456cdf2bf020b36bb0e3f780c37074eab [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:6eabd152ff4036248d66efda456a36cb33d24b7291b33f25f75140726c88da35" "/opt/rustwide/cargo-home/bin/cargo" "+5d5ff84130da0d74c6ece368dbe821d8f83fa526" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] b4892fe493aa1264207535354dfbdee54f46debabf2cbbdb4d6d3b950af972d1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b4892fe493aa1264207535354dfbdee54f46debabf2cbbdb4d6d3b950af972d1", kill_on_drop: false }` [INFO] [stderr] warning: variant is never constructed: `OtherPattern` [INFO] [stderr] --> src/types.rs:89:6 [INFO] [stderr] | [INFO] [stderr] 89 | OtherPattern { name: String, pattern_id: u16 } [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: 1 warning emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.25s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/find_tfbs-51b9e94a06191edd [INFO] [stdout] [INFO] [stdout] running 15 tests [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_deletion ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_snp ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_one_insert ... ok [INFO] [stdout] test pattern::tests::test_match_gataa ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_two_snp ... ok [INFO] [stdout] test range::tests::test_range_contains ... ok [INFO] [stdout] test range::tests::test_range_display ... ok [INFO] [stdout] test bed::tests::test_merge_bed ... ok [INFO] [stdout] test tests::test_count_matches ... ok [INFO] [stdout] test haplotype::tests::test_patch_haplotype_with_no_diff ... ok [INFO] [stdout] test pattern::tests::test_matches ... ok [INFO] [stdout] test pattern::tests::test_parse_pwm_files ... FAILED [INFO] [stdout] test pattern::tests::test_parse_threshold ... FAILED [INFO] [stderr] error: test failed, to rerun pass '--bin find-tfbs' [INFO] [stdout] test tests::test_integration_no_polymorphism ... FAILED [INFO] [stdout] test tests::test_integration_one_polymorphism ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- pattern::tests::test_parse_pwm_files stdout ---- [INFO] [stdout] thread 'pattern::tests::test_parse_pwm_files' panicked at 'Could not open file thresholds/GATA1_HUMAN.H11MO.1.A.thr: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/pattern.rs:115:45 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ef092c9510 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ef092c9510 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ef092c9510 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ef092c9510 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ef092f034c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ef092c56e2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ef092cbe05 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ef092cbe05 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ef092cbe05 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ef092cb992 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ef092cc5a1 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ef092cc0e7 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ef092c99cc - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ef092cc049 - rust_begin_unwind [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ef092ed881 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ef092ed6a3 - core::option::expect_none_failed::he492a18657d97593 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/option.rs:1268:5 [INFO] [stdout] 16: 0x55ef0909c4e9 - core::result::Result::expect::h829cd77189c19cd2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/result.rs:933:23 [INFO] [stdout] 17: 0x55ef091053df - find_tfbs::pattern::read_lines::h3f6c704d705877e0 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:115:16 [INFO] [stdout] 18: 0x55ef0910340f - find_tfbs::pattern::parse_threshold_file::h96e82787f68724f2 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:20:24 [INFO] [stdout] 19: 0x55ef09103eb8 - find_tfbs::pattern::parse_pwm_files::h96455b35a9df7383 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:43:19 [INFO] [stdout] 20: 0x55ef090d0261 - find_tfbs::pattern::tests::test_parse_pwm_files::h8ac2c5e965692836 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:194:20 [INFO] [stdout] 21: 0x55ef090d014a - find_tfbs::pattern::tests::test_parse_pwm_files::{{closure}}::hb380cdf6842c96f8 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:193:5 [INFO] [stdout] 22: 0x55ef090f7a7e - core::ops::function::FnOnce::call_once::hcccb229b19baed86 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x55ef091459e3 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 24: 0x55ef091459e3 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:516:5 [INFO] [stdout] 25: 0x55ef091440d8 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 26: 0x55ef091440d8 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 27: 0x55ef091440d8 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 28: 0x55ef091440d8 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 29: 0x55ef091440d8 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 30: 0x55ef091440d8 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:538:18 [INFO] [stdout] 31: 0x55ef091440d8 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:449:39 [INFO] [stdout] 32: 0x55ef0911e6c6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 33: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 34: 0x55ef09122e8d - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 35: 0x55ef09122e8d - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 36: 0x55ef09122e8d - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 37: 0x55ef09122e8d - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 38: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 39: 0x55ef09122e8d - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 40: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 41: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 42: 0x55ef092d242a - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 43: 0x7f226c751609 - start_thread [INFO] [stdout] 44: 0x7f226c521293 - clone [INFO] [stdout] 45: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- pattern::tests::test_parse_threshold stdout ---- [INFO] [stdout] thread 'pattern::tests::test_parse_threshold' panicked at 'Could not open file thresholds/GATA1_HUMAN.H11MO.0.A.thr: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/pattern.rs:115:45 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ef092c9510 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ef092c9510 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ef092c9510 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ef092c9510 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ef092f034c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ef092c56e2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ef092cbe05 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ef092cbe05 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ef092cbe05 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ef092cb992 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ef092cc5a1 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ef092cc0e7 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ef092c99cc - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ef092cc049 - rust_begin_unwind [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ef092ed881 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ef092ed6a3 - core::option::expect_none_failed::he492a18657d97593 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/option.rs:1268:5 [INFO] [stdout] 16: 0x55ef0909c4e9 - core::result::Result::expect::h829cd77189c19cd2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/result.rs:933:23 [INFO] [stdout] 17: 0x55ef091053df - find_tfbs::pattern::read_lines::h3f6c704d705877e0 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:115:16 [INFO] [stdout] 18: 0x55ef0910340f - find_tfbs::pattern::parse_threshold_file::h96e82787f68724f2 [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:20:24 [INFO] [stdout] 19: 0x55ef090d25f2 - find_tfbs::pattern::tests::test_parse_threshold::h313ae9c8544adeaf [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:264:25 [INFO] [stdout] 20: 0x55ef090d25aa - find_tfbs::pattern::tests::test_parse_threshold::{{closure}}::he72837d3927d6ccd [INFO] [stdout] at /opt/rustwide/workdir/src/pattern.rs:263:5 [INFO] [stdout] 21: 0x55ef090f7b4e - core::ops::function::FnOnce::call_once::he3e4f8a07ec466e8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 22: 0x55ef091459e3 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 23: 0x55ef091459e3 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:516:5 [INFO] [stdout] 24: 0x55ef091440d8 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 25: 0x55ef091440d8 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 26: 0x55ef091440d8 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 27: 0x55ef091440d8 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 28: 0x55ef091440d8 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 29: 0x55ef091440d8 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:538:18 [INFO] [stdout] 30: 0x55ef091440d8 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:449:39 [INFO] [stdout] 31: 0x55ef0911e6c6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 32: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 33: 0x55ef09122e8d - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 34: 0x55ef09122e8d - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 35: 0x55ef09122e8d - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 36: 0x55ef09122e8d - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 37: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 38: 0x55ef09122e8d - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 39: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 40: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 41: 0x55ef092d242a - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 42: 0x7f226c751609 - start_thread [INFO] [stdout] 43: 0x7f226c521293 - clone [INFO] [stdout] 44: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::test_integration_no_polymorphism stdout ---- [INFO] [stdout] Loaded PWM ACGT (len 4, id 0, min_score 3999) [INFO] [stdout] PWM ACGT 3999 + 4 [INFO] [stdout] PWM ACGT 3999 - 4 [INFO] [stdout] Loaded test_data/regions1.bed: 5 peaks covering 50 bp [INFO] [stdout] Loaded test_data/regions2.bed: 4 peaks covering 26 bp [INFO] [stdout] Merged all region files: 5 merged regions covering 71 bp [INFO] [stdout] Reading 4 samples out of 4 [INFO] [stdout] Spawned one worker [INFO] [stdout] Reference haplotype (freq=8): 97 AAAACGTAAAAAAAAAAAAAAA [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=+ [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=- [INFO] [stdout] Min and max count: 4 4 [INFO] [stdout] [INFO] [stdout] Peak 1/5 0 ms (1 total) 100 115 1 haplotypes 0 variants 16 matches [INFO] [stdout] Reference haplotype (freq=8): 115 AAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 2/5 0 ms (1 total) 118 130 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 147 AAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 3/5 0 ms (1 total) 150 160 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 158 AAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 4/5 0 ms (1 total) 161 165 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 177 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 5/5 0 ms (1 total) 180 210 1 haplotypes 0 variants 0 matches [INFO] [stdout] thread '' panicked at 'Could not create output file: Os { code: 30, kind: Other, message: "Read-only file system" }', src/main.rs:267:115 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ef092c9510 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ef092c9510 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ef092c9510 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ef092c9510 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ef092f034c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ef092c56e2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ef092cbe05 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ef092cbe05 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ef092cbe05 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ef092cb992 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ef092cc5a1 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ef092cc0e7 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ef092c99cc - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ef092cc049 - rust_begin_unwind [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ef092ed881 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ef092ed6a3 - core::option::expect_none_failed::he492a18657d97593 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/option.rs:1268:5 [INFO] [stdout] 16: 0x55ef0909c4e9 - core::result::Result::expect::h829cd77189c19cd2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/result.rs:933:23 [INFO] [stdout] 17: 0x55ef09090f4b - find_tfbs::run::{{closure}}::hd07ad89e39fb1a35 [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:267:84 [INFO] [stdout] 18: 0x55ef090e8910 - std::sys_common::backtrace::__rust_begin_short_backtrace::ha3c2771db1b09012 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 19: 0x55ef090ac332 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::he011e031771d0ea9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 20: 0x55ef090c6d02 - as core::ops::function::FnOnce<()>>::call_once::h45050f92fe341b6f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 21: 0x55ef090f719d - std::panicking::try::do_call::hdd1dbdb8eb6e9c3e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 22: 0x55ef091004ad - __rust_try [INFO] [stdout] 23: 0x55ef090f7050 - std::panicking::try::hcf2c3c432da1fbaa [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 24: 0x55ef090c8012 - std::panic::catch_unwind::h6f9c50b59d2eb98c [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 25: 0x55ef090abdb4 - std::thread::Builder::spawn_unchecked::{{closure}}::h0ef63085cd28b3b8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 26: 0x55ef090f753e - core::ops::function::FnOnce::call_once{{vtable.shim}}::ha820296b7281b6a3 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 27: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 28: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 29: 0x55ef092d242a - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 30: 0x7f226c751609 - start_thread [INFO] [stdout] 31: 0x7f226c521293 - clone [INFO] [stdout] 32: 0x0 - [INFO] [stdout] Writer thread joined. End program [INFO] [stdout] thread 'tests::test_integration_no_polymorphism' panicked at 'unable to read file: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/main.rs:554:82 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ef092c9510 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ef092c9510 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ef092c9510 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ef092c9510 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ef092f034c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ef092c56e2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ef092cbe05 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ef092cbe05 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ef092cbe05 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ef092cb992 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ef092cc5a1 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ef092cc0e7 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ef092c99cc - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ef092cc049 - rust_begin_unwind [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ef092ed881 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ef092ed6a3 - core::option::expect_none_failed::he492a18657d97593 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/option.rs:1268:5 [INFO] [stdout] 16: 0x55ef0909c2a4 - core::result::Result::expect::h1424769cc44760ee [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/result.rs:933:23 [INFO] [stdout] 17: 0x55ef09106945 - find_tfbs::tests::test_integration_no_polymorphism::h92ef51793a4db7f5 [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:554:22 [INFO] [stdout] 18: 0x55ef0910654a - find_tfbs::tests::test_integration_no_polymorphism::{{closure}}::hca915a68393a0d13 [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:549:5 [INFO] [stdout] 19: 0x55ef090f7b1e - core::ops::function::FnOnce::call_once::hd4a295c69bc8e506 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55ef091459e3 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55ef091459e3 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:516:5 [INFO] [stdout] 22: 0x55ef091440d8 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 23: 0x55ef091440d8 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 24: 0x55ef091440d8 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 25: 0x55ef091440d8 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 26: 0x55ef091440d8 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 27: 0x55ef091440d8 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:538:18 [INFO] [stdout] 28: 0x55ef091440d8 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:449:39 [INFO] [stdout] 29: 0x55ef0911e6c6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 30: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 31: 0x55ef09122e8d - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 32: 0x55ef09122e8d - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 33: 0x55ef09122e8d - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 34: 0x55ef09122e8d - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 35: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 36: 0x55ef09122e8d - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 37: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 38: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 39: 0x55ef092d242a - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 40: 0x7f226c751609 - start_thread [INFO] [stdout] 41: 0x7f226c521293 - clone [INFO] [stdout] 42: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::test_integration_one_polymorphism stdout ---- [INFO] [stdout] Loaded PWM ACGT (len 4, id 0, min_score 3999) [INFO] [stdout] PWM ACGT 3999 + 4 [INFO] [stdout] PWM ACGT 3999 - 4 [INFO] [stdout] Loaded test_data/regions1.bed: 5 peaks covering 50 bp [INFO] [stdout] Loaded test_data/regions2.bed: 4 peaks covering 26 bp [INFO] [stdout] Merged all region files: 5 merged regions covering 71 bp [INFO] [stdout] Reading 4 samples out of 4 [INFO] [stdout] Spawned one worker [INFO] [stdout] Patched haplotype (freq=1): 97 AAAGCGTAAAAAAAAAAAAAAA [INFO] [stdout] Variant: 100 A->G [INFO] [stdout] Reference haplotype (freq=7): 97 AAAACGTAAAAAAAAAAAAAAA [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=+ [INFO] [stdout] Pattern match: score=4000 min_score=3999 name=ACGT position=100 direction=- [INFO] [stdout] Min and max count: 2 4 [INFO] [stdout] [INFO] [stdout] Peak 1/5 0 ms (1 total) 100 115 2 haplotypes 1 variants 14 matches [INFO] [stdout] Reference haplotype (freq=8): 115 AAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 2/5 0 ms (1 total) 118 130 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 147 AAAAAAAAAAAAAAAAA [INFO] [stdout] thread '' panicked at 'Could not create output file: Os { code: 30, kind: Other, message: "Read-only file system" }', src/main.rs:267:115 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ef092c9510 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ef092c9510 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ef092c9510 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ef092c9510 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ef092f034c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ef092c56e2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ef092cbe05 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ef092cbe05 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ef092cbe05 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ef092cb992 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ef092cc5a1 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ef092cc0e7 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ef092c99cc - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ef092cc049 - rust_begin_unwind [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ef092ed881 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ef092ed6a3 - core::option::expect_none_failed::he492a18657d97593 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/option.rs:1268:5 [INFO] [stdout] 16: 0x55ef0909c4e9 - core::result::Result::expect::h829cd77189c19cd2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/result.rs:933:23 [INFO] [stdout] 17: 0x55ef09090f4b - find_tfbs::run::{{closure}}::hd07ad89e39fb1a35 [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:267:84 [INFO] [stdout] 18: 0x55ef090e8910 - std::sys_common::backtrace::__rust_begin_short_backtrace::ha3c2771db1b09012 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 19: 0x55ef090ac332 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::he011e031771d0ea9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 20: 0x55ef090c6d02 - as core::ops::function::FnOnce<()>>::call_once::h45050f92fe341b6f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 21: 0x55ef090f719d - std::panicking::try::do_call::hdd1dbdb8eb6e9c3e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 22: 0x55ef091004ad - __rust_try [INFO] [stdout] 23: 0x55ef090f7050 - std::panicking::try::hcf2c3c432da1fbaa [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 24: 0x55ef090c8012 - std::panic::catch_unwind::h6f9c50b59d2eb98c [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 25: 0x55ef090abdb4 - std::thread::Builder::spawn_unchecked::{{closure}}::h0ef63085cd28b3b8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 26: 0x55ef090f753e - core::ops::function::FnOnce::call_once{{vtable.shim}}::ha820296b7281b6a3 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 27: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 28: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 29: 0x55ef092d242a - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 30: 0x7f226c751609 - start_thread [INFO] [stdout] 31: 0x7f226c521293 - clone [INFO] [stdout] 32: 0x0 - [INFO] [stdout] [INFO] [stdout] Peak 3/5 0 ms (1 total) 150 160 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 158 AAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 4/5 0 ms (122 total) 161 165 1 haplotypes 0 variants 0 matches [INFO] [stdout] Reference haplotype (freq=8): 177 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [INFO] [stdout] [INFO] [stdout] Peak 5/5 0 ms (122 total) 180 210 1 haplotypes 0 variants 0 matches [INFO] [stdout] Writer thread joined. End program [INFO] [stdout] thread 'tests::test_integration_one_polymorphism' panicked at 'unable to read file: Os { code: 2, kind: NotFound, message: "No such file or directory" }', src/main.rs:565:82 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x55ef092c9510 - std::backtrace_rs::backtrace::libunwind::trace::h95fc93571932622e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stdout] 1: 0x55ef092c9510 - std::backtrace_rs::backtrace::trace_unsynchronized::h4d0b90afc33151fd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x55ef092c9510 - std::sys_common::backtrace::_print_fmt::h93d302d001a3bf01 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stdout] 3: 0x55ef092c9510 - ::fmt::h7881e3a580134f9a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stdout] 4: 0x55ef092f034c - core::fmt::write::h1857a60b204f1b6a [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/fmt/mod.rs:1078:17 [INFO] [stdout] 5: 0x55ef092c56e2 - std::io::Write::write_fmt::hd17811b9a5dec54b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/io/mod.rs:1519:15 [INFO] [stdout] 6: 0x55ef092cbe05 - std::sys_common::backtrace::_print::h3e3f9fed81bc11e9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stdout] 7: 0x55ef092cbe05 - std::sys_common::backtrace::print::hd22ac23fed5071c8 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stdout] 8: 0x55ef092cbe05 - std::panicking::default_hook::{{closure}}::h1647bdcf68060e17 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:208:50 [INFO] [stdout] 9: 0x55ef092cb992 - std::panicking::default_hook::hb08853b392b9404b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:222:9 [INFO] [stdout] 10: 0x55ef092cc5a1 - std::panicking::rust_panic_with_hook::h3624ee29da369ede [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:591:17 [INFO] [stdout] 11: 0x55ef092cc0e7 - std::panicking::begin_panic_handler::{{closure}}::hefcfcedcde6bb6d9 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:497:13 [INFO] [stdout] 12: 0x55ef092c99cc - std::sys_common::backtrace::__rust_end_short_backtrace::heb130cec93caa706 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stdout] 13: 0x55ef092cc049 - rust_begin_unwind [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:493:5 [INFO] [stdout] 14: 0x55ef092ed881 - core::panicking::panic_fmt::hb15d6f55e8472f62 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/panicking.rs:92:14 [INFO] [stdout] 15: 0x55ef092ed6a3 - core::option::expect_none_failed::he492a18657d97593 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/option.rs:1268:5 [INFO] [stdout] 16: 0x55ef0909c2a4 - core::result::Result::expect::h1424769cc44760ee [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/result.rs:933:23 [INFO] [stdout] 17: 0x55ef09107265 - find_tfbs::tests::test_integration_one_polymorphism::h501f6bbefc6ee20c [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:565:22 [INFO] [stdout] 18: 0x55ef09106e6a - find_tfbs::tests::test_integration_one_polymorphism::{{closure}}::h5f90212df9ba3b2d [INFO] [stdout] at /opt/rustwide/workdir/src/main.rs:560:5 [INFO] [stdout] 19: 0x55ef090f76be - core::ops::function::FnOnce::call_once::h24bd9b9504b48d25 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 20: 0x55ef091459e3 - core::ops::function::FnOnce::call_once::h72b3efc134abec04 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 21: 0x55ef091459e3 - test::__rust_begin_short_backtrace::hf76173a3f44f554b [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:516:5 [INFO] [stdout] 22: 0x55ef091440d8 - as core::ops::function::FnOnce>::call_once::h49f5b686efed1e06 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 23: 0x55ef091440d8 - as core::ops::function::FnOnce<()>>::call_once::h4879f836ca9aaead [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 24: 0x55ef091440d8 - std::panicking::try::do_call::h9655796ce3021b6c [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 25: 0x55ef091440d8 - std::panicking::try::h346508ed448399f4 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 26: 0x55ef091440d8 - std::panic::catch_unwind::h00e84f4e9c3caaa0 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 27: 0x55ef091440d8 - test::run_test_in_process::hc80321f825c30106 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:538:18 [INFO] [stdout] 28: 0x55ef091440d8 - test::run_test::run_test_inner::{{closure}}::h89c217441620999f [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/test/src/lib.rs:449:39 [INFO] [stdout] 29: 0x55ef0911e6c6 - std::sys_common::backtrace::__rust_begin_short_backtrace::h3852ec0877008db6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stdout] 30: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h7c7dfff4b938ae67 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:474:17 [INFO] [stdout] 31: 0x55ef09122e8d - as core::ops::function::FnOnce<()>>::call_once::h8db0dd15c072a403 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:322:9 [INFO] [stdout] 32: 0x55ef09122e8d - std::panicking::try::do_call::haad8639857ae1187 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:379:40 [INFO] [stdout] 33: 0x55ef09122e8d - std::panicking::try::h61de115e9dce60f6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panicking.rs:343:19 [INFO] [stdout] 34: 0x55ef09122e8d - std::panic::catch_unwind::h50601fd82666a838 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/panic.rs:396:14 [INFO] [stdout] 35: 0x55ef09122e8d - std::thread::Builder::spawn_unchecked::{{closure}}::hac267391ef9d21bd [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/thread/mod.rs:473:30 [INFO] [stdout] 36: 0x55ef09122e8d - core::ops::function::FnOnce::call_once{{vtable.shim}}::heb15d2d9c42706b7 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/core/src/ops/function.rs:227:5 [INFO] [stdout] 37: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h5446ed3fdb82006e [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 38: 0x55ef092d242a - as core::ops::function::FnOnce>::call_once::h62a21a889329a3f2 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/alloc/src/boxed.rs:1318:9 [INFO] [stdout] 39: 0x55ef092d242a - std::sys::unix::thread::Thread::new::thread_start::h62402416daf174b6 [INFO] [stdout] at /rustc/5d5ff84130da0d74c6ece368dbe821d8f83fa526/library/std/src/sys/unix/thread.rs:71:17 [INFO] [stdout] 40: 0x7f226c751609 - start_thread [INFO] [stdout] 41: 0x7f226c521293 - clone [INFO] [stdout] 42: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] pattern::tests::test_parse_pwm_files [INFO] [stdout] pattern::tests::test_parse_threshold [INFO] [stdout] tests::test_integration_no_polymorphism [INFO] [stdout] tests::test_integration_one_polymorphism [INFO] [stdout] [INFO] [stdout] test result: FAILED. 11 passed; 4 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b4892fe493aa1264207535354dfbdee54f46debabf2cbbdb4d6d3b950af972d1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b4892fe493aa1264207535354dfbdee54f46debabf2cbbdb4d6d3b950af972d1", kill_on_drop: false }` [INFO] [stdout] b4892fe493aa1264207535354dfbdee54f46debabf2cbbdb4d6d3b950af972d1