[INFO] fetching crate varlociraptor 2.5.3... [INFO] checking varlociraptor-2.5.3 against try#961316100510fe780d266d35bcf68702fbb049e5 for pr-78935-1 [INFO] extracting crate varlociraptor 2.5.3 into /workspace/builds/worker-1/source [INFO] validating manifest of crates.io crate varlociraptor 2.5.3 on toolchain 961316100510fe780d266d35bcf68702fbb049e5 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+961316100510fe780d266d35bcf68702fbb049e5" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate varlociraptor 2.5.3 [INFO] finished tweaking crates.io crate varlociraptor 2.5.3 [INFO] tweaked toml for crates.io crate varlociraptor 2.5.3 written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate crates.io crate varlociraptor 2.5.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+961316100510fe780d266d35bcf68702fbb049e5" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded bio-types v0.7.0 [INFO] [stderr] Downloaded ftp v3.0.1 [INFO] [stderr] Downloaded lru_time_cache v0.10.0 [INFO] [stderr] Downloaded cached v0.9.0 [INFO] [stderr] Downloaded typed-builder v0.7.1 [INFO] [stderr] Downloaded format-bytes v0.1.2 [INFO] [stderr] Downloaded format-bytes-macros v0.1.1 [INFO] [stderr] Downloaded triple_accel v0.3.4 [INFO] [stderr] Downloaded bv v0.11.1 [INFO] [stderr] Downloaded bio v0.32.0 [INFO] [stderr] Downloaded counter v0.4.3 [INFO] [stderr] Downloaded derive_builder_core v0.9.0 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded bytecount v0.6.1 [INFO] [stderr] Downloaded statrs v0.11.0 [INFO] [stderr] Downloaded rust-htslib v0.35.2 [INFO] [stderr] Downloaded csv v1.1.4 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded shrinkwraprs v0.2.3 [INFO] [stderr] Downloaded derive_builder v0.9.0 [INFO] [stderr] Downloaded statrs v0.12.0 [INFO] [stderr] Downloaded eval v0.4.3 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded GSL v2.0.1 [INFO] [stderr] Downloaded hts-sys v1.11.1-fix1 [INFO] [stderr] Downloaded GSL-sys v2.0.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+961316100510fe780d266d35bcf68702fbb049e5" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] adeaa1fe9223d04236041452d5307e88fa93d8a8d52e6940dd6340b026788d9c [INFO] running `Command { std: "docker" "start" "-a" "adeaa1fe9223d04236041452d5307e88fa93d8a8d52e6940dd6340b026788d9c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "adeaa1fe9223d04236041452d5307e88fa93d8a8d52e6940dd6340b026788d9c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "adeaa1fe9223d04236041452d5307e88fa93d8a8d52e6940dd6340b026788d9c", kill_on_drop: false }` [INFO] [stdout] adeaa1fe9223d04236041452d5307e88fa93d8a8d52e6940dd6340b026788d9c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+961316100510fe780d266d35bcf68702fbb049e5" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fb115dfe57b994917361af55554ab490ef6d85f88cc0435baa363f772e9d578e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "fb115dfe57b994917361af55554ab490ef6d85f88cc0435baa363f772e9d578e", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.50 [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling version_check v0.1.5 [INFO] [stderr] Compiling const_fn v0.4.3 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling winapi-build v0.1.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling unicode-segmentation v1.7.0 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Checking futures-sink v0.3.8 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Checking futures-core v0.3.8 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Checking scopeguard v0.3.3 [INFO] [stderr] Compiling fs_extra v1.2.0 [INFO] [stderr] Checking winapi v0.2.8 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling humansize v1.1.0 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling askama_escape v0.2.0 [INFO] [stderr] Checking hashbrown v0.9.1 [INFO] [stderr] Compiling bio v0.32.0 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Compiling derive_builder v0.9.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking bit-vec v0.6.2 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking array-macro v1.0.5 [INFO] [stderr] Compiling anyhow v1.0.34 [INFO] [stderr] Checking triple_accel v0.3.4 [INFO] [stderr] Checking fixedbitset v0.1.9 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking ordermap v0.3.5 [INFO] [stderr] Compiling paste v1.0.3 [INFO] [stderr] Checking strum v0.18.0 [INFO] [stderr] Checking bytecount v0.6.1 [INFO] [stderr] Checking utf8-ranges v0.1.3 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking regex-syntax v0.3.9 [INFO] [stderr] Checking lru_time_cache v0.10.0 [INFO] [stderr] Checking lazy_static v0.1.16 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-iter v0.1.42 [INFO] [stderr] Compiling crossbeam-utils v0.8.0 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking futures-channel v0.3.8 [INFO] [stderr] Checking lock_api v0.1.5 [INFO] [stderr] Compiling kernel32-sys v0.2.2 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling unicase v1.4.2 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Checking yaml-rust v0.4.4 [INFO] [stderr] Checking bit-set v0.5.2 [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling GSL-sys v2.0.1 [INFO] [stderr] Checking petgraph v0.4.13 [INFO] [stderr] Checking memchr v0.1.11 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking indexmap v1.6.0 [INFO] [stderr] Compiling parking_lot_core v0.4.0 [INFO] [stderr] Checking idna v0.2.0 [INFO] [stderr] Checking idna v0.1.5 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking aho-corasick v0.5.3 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v1.1.0 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking counter v0.4.3 [INFO] [stderr] Compiling jobserver v0.1.21 [INFO] [stderr] Checking mime v0.2.6 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Checking thread-id v2.0.0 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking rand v0.3.23 [INFO] [stderr] Checking statrs v0.11.0 [INFO] [stderr] Checking chrono v0.4.19 [INFO] [stderr] Checking url v2.2.0 [INFO] [stderr] Checking thread_local v0.2.7 [INFO] [stderr] Compiling cc v1.0.65 [INFO] [stderr] Checking crossbeam v0.7.3 [INFO] [stderr] Checking url v1.7.2 [INFO] [stderr] Checking num v0.1.42 [INFO] [stderr] Checking statrs v0.12.0 [INFO] [stderr] Checking parking_lot v0.7.1 [INFO] [stderr] Checking regex v0.1.80 [INFO] [stderr] Checking rulinalg v0.3.7 [INFO] [stderr] Checking chrono v0.2.25 [INFO] [stderr] Checking crossbeam-epoch v0.9.0 [INFO] [stderr] Checking crossbeam-channel v0.5.0 [INFO] [stderr] Checking once_cell v0.1.8 [INFO] [stderr] Compiling openssl-src v111.12.0+1.1.1h [INFO] [stderr] Checking GSL v2.0.1 [INFO] [stderr] Checking hyper v0.10.16 [INFO] [stderr] Checking fern v0.5.9 [INFO] [stderr] Checking cached v0.9.0 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking rusty-machine v0.5.4 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling openssl-sys v0.9.58 [INFO] [stderr] Compiling curl-sys v0.4.38+curl-7.73.0 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling jemalloc-sys v0.3.2 [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 [INFO] [stderr] Compiling miniz-sys v0.1.12 [INFO] [stderr] Checking env_logger v0.3.5 [INFO] [stderr] Checking ftp v3.0.1 [INFO] [stderr] Checking flate2 v0.2.20 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Compiling darling_core v0.10.2 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling pest_generator v2.1.3 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Compiling pin-project-internal v1.0.2 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling futures-macro v0.3.8 [INFO] [stderr] Compiling thiserror-impl v1.0.22 [INFO] [stderr] Compiling enum-map-derive v0.4.6 [INFO] [stderr] Compiling snafu-derive v0.6.9 [INFO] [stderr] Compiling format-bytes-macros v0.1.1 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling structopt-derive v0.4.13 [INFO] [stderr] Compiling shrinkwraprs v0.2.3 [INFO] [stderr] Compiling getset v0.1.1 [INFO] [stderr] Compiling typed-builder v0.7.1 [INFO] [stderr] Compiling pest_derive v2.1.0 [INFO] [stderr] Compiling darling_macro v0.10.2 [INFO] [stderr] Checking format-bytes v0.1.2 [INFO] [stderr] Checking enum-map v0.6.4 [INFO] [stderr] Checking thiserror v1.0.22 [INFO] [stderr] Checking pin-project v1.0.2 [INFO] [stderr] Checking snafu v0.6.9 [INFO] [stderr] Checking futures-util v0.3.8 [INFO] [stderr] Compiling darling v0.10.2 [INFO] [stderr] Compiling derive_builder_core v0.9.0 [INFO] [stderr] Checking futures-executor v0.3.8 [INFO] [stderr] Checking futures v0.3.8 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking bio-types v0.7.0 [INFO] [stderr] Checking bstr v0.2.14 [INFO] [stderr] Checking toml v0.4.10 [INFO] [stderr] Checking multimap v0.8.2 [INFO] [stderr] Checking bincode v1.3.1 [INFO] [stderr] Checking serde_yaml v0.8.14 [INFO] [stderr] Checking half v1.6.0 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking csv v1.1.4 [INFO] [stderr] Checking askama_shared v0.8.0 [INFO] [stderr] Checking eval v0.4.3 [INFO] [stderr] Compiling askama_derive v0.8.0 [INFO] [stderr] Checking structopt v0.3.20 [INFO] [stderr] Checking rust-htslib v0.35.2 [INFO] [stderr] Checking askama v0.8.0 [INFO] [stderr] Checking jemallocator v0.3.2 [INFO] [stderr] Checking varlociraptor v2.5.3 (/opt/rustwide/workdir) [INFO] [stdout] warning: associated function is never used: `effective_mutation_rate` [INFO] [stdout] --> src/estimation/effective_mutation_rate.rs:25:19 [INFO] [stdout] | [INFO] [stdout] 25 | pub(crate) fn effective_mutation_rate(&self) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function is never used: `estimate` [INFO] [stdout] --> src/estimation/effective_mutation_rate.rs:30:15 [INFO] [stdout] | [INFO] [stdout] 30 | pub(crate) fn estimate>( [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 2 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 7m 24s [INFO] running `Command { std: "docker" "inspect" "fb115dfe57b994917361af55554ab490ef6d85f88cc0435baa363f772e9d578e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fb115dfe57b994917361af55554ab490ef6d85f88cc0435baa363f772e9d578e", kill_on_drop: false }` [INFO] [stdout] fb115dfe57b994917361af55554ab490ef6d85f88cc0435baa363f772e9d578e