[INFO] fetching crate libhdf5-sys 0.2.0... [INFO] checking libhdf5-sys-0.2.0 against try#b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8 for pr-78363 [INFO] extracting crate libhdf5-sys 0.2.0 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate libhdf5-sys 0.2.0 on toolchain b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] finished tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] tweaked toml for crates.io crate libhdf5-sys 0.2.0 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded libhdf5-lib v0.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4c455faa6b4a40987a8aa96810c65ef7c449d35cbe21bed53121a8417a3e906a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4c455faa6b4a40987a8aa96810c65ef7c449d35cbe21bed53121a8417a3e906a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4c455faa6b4a40987a8aa96810c65ef7c449d35cbe21bed53121a8417a3e906a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4c455faa6b4a40987a8aa96810c65ef7c449d35cbe21bed53121a8417a3e906a", kill_on_drop: false }` [INFO] [stdout] 4c455faa6b4a40987a8aa96810c65ef7c449d35cbe21bed53121a8417a3e906a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bab79d1069d98ef63827cd62d6895580527d19c678a977a7e11faaa34b7fb8f0 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "bab79d1069d98ef63827cd62d6895580527d19c678a977a7e11faaa34b7fb8f0", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c.build_script_build.8ap49mk6-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c.build_script_build.8ap49mk6-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c.build_script_build.8ap49mk6-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c.build_script_build.8ap49mk6-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c.build_script_build.8ap49mk6-cgu.4.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c.build_script_build.8ap49mk6-cgu.5.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c" "/opt/rustwide/target/debug/build/libhdf5-sys-2faf93f67daf0a0c/build_script_build-2faf93f67daf0a0c.4jsulntm54qu3126.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-799fda750ec979a5.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-7edd956e9d8d05ea.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-448643d99e633b5d.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-c7c3d631a525883a.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-d7659a11bb201e01.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-3582800a023674d1.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-56ae8ed396eb3f30.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-b13a322082c79e4f.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-1d4694108f8cb543.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-79eaa6e630880f50.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-0df1a4ec96f80cf7.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-bba9b0f0f4d77257.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-f848f9c987265235.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-0d5ea4f2d39b8e27.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-c22053fa5fc00a3b.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-c52e5d6301e1bd59.rlib" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-2675a9a46b5cec89.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/b2c2190fa7bf856bb0ed5e8806266e3a2135c6f8/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-6e3d052afeb9f711.rlib" "-Wl,-Bdynamic" "-lhdf5" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `libhdf5-sys` [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `Command { std: "docker" "inspect" "bab79d1069d98ef63827cd62d6895580527d19c678a977a7e11faaa34b7fb8f0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bab79d1069d98ef63827cd62d6895580527d19c678a977a7e11faaa34b7fb8f0", kill_on_drop: false }` [INFO] [stdout] bab79d1069d98ef63827cd62d6895580527d19c678a977a7e11faaa34b7fb8f0