[INFO] fetching crate consprob 0.1.0... [INFO] checking consprob-0.1.0 against master#430feb24a46993e5073c1bb1b39da190d83fa2bf for pr-78363 [INFO] extracting crate consprob 0.1.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate consprob 0.1.0 on toolchain 430feb24a46993e5073c1bb1b39da190d83fa2bf [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate consprob 0.1.0 [INFO] finished tweaking crates.io crate consprob 0.1.0 [INFO] tweaked toml for crates.io crate consprob 0.1.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] crate crates.io crate consprob 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 4325ef63f333c52169e09d4bc9903bb47ad82f92f1b68f268f88280d66bc1e5b [INFO] running `Command { std: "docker" "start" "-a" "4325ef63f333c52169e09d4bc9903bb47ad82f92f1b68f268f88280d66bc1e5b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4325ef63f333c52169e09d4bc9903bb47ad82f92f1b68f268f88280d66bc1e5b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4325ef63f333c52169e09d4bc9903bb47ad82f92f1b68f268f88280d66bc1e5b", kill_on_drop: false }` [INFO] [stdout] 4325ef63f333c52169e09d4bc9903bb47ad82f92f1b68f268f88280d66bc1e5b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3d3962fa86b1b6e3664fdb2a84ef4c07f1642f049a785175b8b45cfc658d7a70 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "3d3962fa86b1b6e3664fdb2a84ef4c07f1642f049a785175b8b45cfc658d7a70", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.18 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling libc v0.2.71 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking either v1.5.3 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling ndarray v0.9.1 [INFO] [stderr] Compiling bv v0.7.4 [INFO] [stderr] Checking void v1.0.2 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking bit-vec v0.4.4 [INFO] [stderr] Checking hashbrown v0.3.1 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking quick-error v1.2.3 [INFO] [stderr] Checking bytecount v0.3.2 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking unicode-width v0.1.7 [INFO] [stderr] Checking lazy_static v0.2.11 [INFO] [stderr] Checking approx v0.1.1 [INFO] [stderr] Checking scoped_threadpool v0.1.9 [INFO] [stderr] Checking thread_local v0.3.6 [INFO] [stderr] Checking unreachable v1.0.0 [INFO] [stderr] Checking itertools v0.6.5 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking bit-set v0.4.0 [INFO] [stderr] Checking getopts v0.2.21 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Checking aho-corasick v0.6.10 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking regex v0.2.11 [INFO] [stderr] Checking time v0.1.43 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking bio-seq-algos v0.1.17 [INFO] [stderr] Compiling syn v1.0.33 [INFO] [stderr] Checking rna-ss-params v0.1.17 [INFO] [stderr] Checking num-traits v0.1.43 [INFO] [stderr] Checking num-complex v0.1.43 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v0.5.2 [INFO] [stderr] Checking bstr v0.2.13 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.4.0 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Checking bio v0.20.3 [INFO] [stderr] Checking rna-algos v0.1.15 [INFO] [stderr] Checking consprob v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(deprecated)]` on by default [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: use of deprecated constant `std::sync::ONCE_INIT`: the `new` function is now preferred [INFO] [stdout] --> src/utils.rs:18:1 [INFO] [stdout] | [INFO] [stdout] 18 | / lazy_static! { [INFO] [stdout] 19 | | pub static ref BA_SCORE_MAT: BaScoreMat = { [INFO] [stdout] 20 | | [ [INFO] [stdout] 21 | | (AA, 0.5256508867), (AC, -0.40906402), (AG, -0.2502759109), (AU, -0.3252306723), [INFO] [stdout] ... | [INFO] [stdout] 44 | | }; [INFO] [stdout] 45 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = note: this warning originates in a macro (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 6 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0463]: can't find crate for `phyloprob` [INFO] [stdout] --> tests/tests.rs:1:1 [INFO] [stdout] | [INFO] [stdout] 1 | extern crate phyloprob; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^ can't find crate [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0463`. [INFO] [stdout] [INFO] [stderr] error: could not compile `consprob` [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "3d3962fa86b1b6e3664fdb2a84ef4c07f1642f049a785175b8b45cfc658d7a70", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3d3962fa86b1b6e3664fdb2a84ef4c07f1642f049a785175b8b45cfc658d7a70", kill_on_drop: false }` [INFO] [stdout] 3d3962fa86b1b6e3664fdb2a84ef4c07f1642f049a785175b8b45cfc658d7a70