[INFO] cloning repository https://github.com/chanzuckerberg/idseq-dedup [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chanzuckerberg/idseq-dedup" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchanzuckerberg%2Fidseq-dedup", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchanzuckerberg%2Fidseq-dedup'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 5c574304344b543595d8e06dcb98299fc8df7bed [INFO] checking chanzuckerberg/idseq-dedup against master#430feb24a46993e5073c1bb1b39da190d83fa2bf for pr-78363 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchanzuckerberg%2Fidseq-dedup" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/chanzuckerberg/idseq-dedup on toolchain 430feb24a46993e5073c1bb1b39da190d83fa2bf [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/chanzuckerberg/idseq-dedup [INFO] finished tweaking git repo https://github.com/chanzuckerberg/idseq-dedup [INFO] tweaked toml for git repo https://github.com/chanzuckerberg/idseq-dedup written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/chanzuckerberg/idseq-dedup already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c9db6f9db389507c9f1f58e6c17418d134be6ff76d0791d178743483d4eae34a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "c9db6f9db389507c9f1f58e6c17418d134be6ff76d0791d178743483d4eae34a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c9db6f9db389507c9f1f58e6c17418d134be6ff76d0791d178743483d4eae34a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c9db6f9db389507c9f1f58e6c17418d134be6ff76d0791d178743483d4eae34a", kill_on_drop: false }` [INFO] [stdout] c9db6f9db389507c9f1f58e6c17418d134be6ff76d0791d178743483d4eae34a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+430feb24a46993e5073c1bb1b39da190d83fa2bf" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 42da636682d0398007218127d2b2c07510ca51d523ebd811e8cb8ad52055ac4e [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "42da636682d0398007218127d2b2c07510ca51d523ebd811e8cb8ad52055ac4e", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.42 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking ppv-lite86 v0.2.9 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking regex-syntax v0.6.18 [INFO] [stderr] Checking array-macro v1.0.5 [INFO] [stderr] Checking quick-error v1.2.3 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking fnv v1.0.7 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Checking itertools v0.9.0 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking indexmap v1.6.0 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking ordered-float v1.1.0 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking aho-corasick v0.7.13 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking ndarray v0.13.1 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Checking fxhash v0.2.1 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking statrs v0.12.0 [INFO] [stderr] Checking tempfile v3.1.0 [INFO] [stderr] Checking regex v1.3.9 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling enum-map-derive v0.4.3 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling snafu-derive v0.6.9 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Checking enum-map v0.6.3 [INFO] [stderr] Checking snafu v0.6.9 [INFO] [stderr] Checking serde v1.0.116 [INFO] [stderr] Checking bstr v0.2.13 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking multimap v0.8.2 [INFO] [stderr] Checking bio-types v0.7.0 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Checking bio v0.32.0 [INFO] [stderr] Checking idseq-dedup v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 24s [INFO] running `Command { std: "docker" "inspect" "42da636682d0398007218127d2b2c07510ca51d523ebd811e8cb8ad52055ac4e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "42da636682d0398007218127d2b2c07510ca51d523ebd811e8cb8ad52055ac4e", kill_on_drop: false }` [INFO] [stdout] 42da636682d0398007218127d2b2c07510ca51d523ebd811e8cb8ad52055ac4e