[INFO] fetching crate mcrt 0.1.3... [INFO] checking mcrt-0.1.3 against master#ffa2e7ae8fbf9badc035740db949b9dae271c29f for pr-78338 [INFO] extracting crate mcrt 0.1.3 into /workspace/builds/worker-14/source [INFO] validating manifest of crates.io crate mcrt 0.1.3 on toolchain ffa2e7ae8fbf9badc035740db949b9dae271c29f [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ffa2e7ae8fbf9badc035740db949b9dae271c29f" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate mcrt 0.1.3 [INFO] finished tweaking crates.io crate mcrt 0.1.3 [INFO] tweaked toml for crates.io crate mcrt 0.1.3 written to /workspace/builds/worker-14/source/Cargo.toml [INFO] crate crates.io crate mcrt 0.1.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+ffa2e7ae8fbf9badc035740db949b9dae271c29f" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+ffa2e7ae8fbf9badc035740db949b9dae271c29f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e4f0b8bafd100faaa3dfb4ebd21e772f2d06af4ac11d3c83f983e0f3381459e6 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e4f0b8bafd100faaa3dfb4ebd21e772f2d06af4ac11d3c83f983e0f3381459e6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e4f0b8bafd100faaa3dfb4ebd21e772f2d06af4ac11d3c83f983e0f3381459e6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e4f0b8bafd100faaa3dfb4ebd21e772f2d06af4ac11d3c83f983e0f3381459e6", kill_on_drop: false }` [INFO] [stdout] e4f0b8bafd100faaa3dfb4ebd21e772f2d06af4ac11d3c83f983e0f3381459e6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-14/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+ffa2e7ae8fbf9badc035740db949b9dae271c29f" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 06a2ccc7b1bd0cf66b9ba578ed99d589fbb0833982c9fece7c93041dbefdc97a [INFO] running `Command { std: "docker" "start" "-a" "06a2ccc7b1bd0cf66b9ba578ed99d589fbb0833982c9fece7c93041dbefdc97a", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Compiling syn v1.0.41 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling serde_derive v1.0.116 [INFO] [stderr] Compiling serde v1.0.116 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Checking either v1.6.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling ucd-trie v0.1.3 [INFO] [stderr] Checking ppv-lite86 v0.2.9 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Checking adler32 v1.2.0 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking siphasher v0.3.3 [INFO] [stderr] Compiling netcdf-sys v0.3.2 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking regex-syntax v0.6.18 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Checking bytemuck v1.4.1 [INFO] [stderr] Checking hashbrown v0.9.0 [INFO] [stderr] Compiling serde_json v1.0.57 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Compiling physical_constants v0.3.0 [INFO] [stderr] Checking number_prefix v0.3.0 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking hex v0.4.2 [INFO] [stderr] Checking slice-of-array v0.2.1 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling rayon v1.4.0 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Compiling pest v2.1.3 [INFO] [stderr] Checking miniz_oxide v0.3.7 [INFO] [stderr] Checking phf_shared v0.8.0 [INFO] [stderr] Checking rgb v0.8.25 [INFO] [stderr] Checking libc v0.2.77 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling libloading v0.6.3 [INFO] [stderr] Checking ryu v1.0.5 [INFO] [stderr] Checking typenum v1.12.0 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Checking num-traits v0.2.12 [INFO] [stderr] Checking crossbeam-utils v0.7.2 [INFO] [stderr] Checking indexmap v1.6.0 [INFO] [stderr] Checking phf v0.8.0 [INFO] [stderr] Checking aho-corasick v0.7.13 [INFO] [stderr] Checking ansi_rgb v0.2.0 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking termios v0.3.2 [INFO] [stderr] Checking terminal_size v0.1.13 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking crossbeam-epoch v0.8.2 [INFO] [stderr] Checking crossbeam-channel v0.4.4 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking deflate v0.8.6 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling pest_meta v2.1.3 [INFO] [stderr] Checking generic-array v0.13.2 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking noisy_float v0.1.13 [INFO] [stderr] Checking png v0.16.7 [INFO] [stderr] Checking rayon-core v1.8.0 [INFO] [stderr] Checking num-rational v0.2.4 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Checking rand_distr v0.2.2 [INFO] [stderr] Compiling palette v0.5.0 [INFO] [stderr] Checking console v0.12.0 [INFO] [stderr] Checking indicatif v0.15.0 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-af63aef5e0dc3944/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55e9e1265f10 - std::backtrace_rs::backtrace::libunwind::trace::h303a626d53553a64 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:100:5 [INFO] [stderr] 1: 0x55e9e1265f10 - std::backtrace_rs::backtrace::trace_unsynchronized::h6abb882733c3f18c [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x55e9e1265f10 - std::sys_common::backtrace::_print_fmt::h57829321f1d9217a [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x55e9e1265f10 - ::fmt::h400b66a054640aac [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x55e9e12848fc - core::fmt::write::h1857a60b204f1b6a [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/core/src/fmt/mod.rs:1076:17 [INFO] [stderr] 5: 0x55e9e1262a82 - std::io::Write::write_fmt::h6453b28c8b27c6ea [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/io/mod.rs:1516:15 [INFO] [stderr] 6: 0x55e9e12683d5 - std::sys_common::backtrace::_print::h15cc4b3923cc9bc0 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x55e9e12683d5 - std::sys_common::backtrace::print::h953c7be178c0674d [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x55e9e12683d5 - std::panicking::default_hook::{{closure}}::h635d667f571198f0 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x55e9e1268078 - std::panicking::default_hook::h3bc2efb48060abaa [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panicking.rs:227:9 [INFO] [stderr] 10: 0x55e9e1268ab1 - std::panicking::rust_panic_with_hook::h887eb0c89f46b8b2 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panicking.rs:577:17 [INFO] [stderr] 11: 0x55e9e124295e - std::panicking::begin_panic::{{closure}}::hfad296a7f60be9d6 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panicking.rs:506:9 [INFO] [stderr] 12: 0x55e9e12420d9 - std::sys_common::backtrace::__rust_end_short_backtrace::h3227e5b35c26fd83 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x55e9e124288b - std::panicking::begin_panic::h96207e20ea8e25c9 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panicking.rs:505:12 [INFO] [stderr] 14: 0x55e9e104106b - build_script_build::LibrarySearcher::try_locate_hdf5_library::h6d81321f1cbe28bf [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] 15: 0x55e9e10428d3 - build_script_build::main::h8eee34da194032bf [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647:9 [INFO] [stderr] 16: 0x55e9e104869b - core::ops::function::FnOnce::call_once::h562a7efd4f107ef6 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 17: 0x55e9e104f1ae - std::sys_common::backtrace::__rust_begin_short_backtrace::hb1f93532139863a0 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 18: 0x55e9e10498f1 - std::rt::lang_start::{{closure}}::h9218f5be9c85c7bd [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/rt.rs:66:18 [INFO] [stderr] 19: 0x55e9e1268ed7 - core::ops::function::impls:: for &F>::call_once::h1af42f2aaad601f7 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 20: 0x55e9e1268ed7 - std::panicking::try::do_call::h9d43a73a8e9fb04a [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panicking.rs:381:40 [INFO] [stderr] 21: 0x55e9e1268ed7 - std::panicking::try::h7a8d1100a6afe839 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panicking.rs:345:19 [INFO] [stderr] 22: 0x55e9e1268ed7 - std::panic::catch_unwind::h9c80942da690cf03 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/panic.rs:382:14 [INFO] [stderr] 23: 0x55e9e1268ed7 - std::rt::lang_start_internal::h18ef240fb861b4d5 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/rt.rs:51:25 [INFO] [stderr] 24: 0x55e9e10498c7 - std::rt::lang_start::h5ff3fa66c0e87913 [INFO] [stderr] at /rustc/ffa2e7ae8fbf9badc035740db949b9dae271c29f/library/std/src/rt.rs:65:5 [INFO] [stderr] 25: 0x55e9e1043f1a - main [INFO] [stderr] 26: 0x7f33befd70b3 - __libc_start_main [INFO] [stderr] 27: 0x55e9e103c0be - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "06a2ccc7b1bd0cf66b9ba578ed99d589fbb0833982c9fece7c93041dbefdc97a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "06a2ccc7b1bd0cf66b9ba578ed99d589fbb0833982c9fece7c93041dbefdc97a", kill_on_drop: false }` [INFO] [stdout] 06a2ccc7b1bd0cf66b9ba578ed99d589fbb0833982c9fece7c93041dbefdc97a