[INFO] fetching crate mcrt 0.1.3... [INFO] checking mcrt-0.1.3 against try#f47dd4da3ae8c32c9e65d307bfe640b143e674df for pr-77526 [INFO] extracting crate mcrt 0.1.3 into /workspace/builds/worker-2/source [INFO] validating manifest of crates.io crate mcrt 0.1.3 on toolchain f47dd4da3ae8c32c9e65d307bfe640b143e674df [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+f47dd4da3ae8c32c9e65d307bfe640b143e674df" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate mcrt 0.1.3 [INFO] finished tweaking crates.io crate mcrt 0.1.3 [INFO] tweaked toml for crates.io crate mcrt 0.1.3 written to /workspace/builds/worker-2/source/Cargo.toml [INFO] crate crates.io crate mcrt 0.1.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+f47dd4da3ae8c32c9e65d307bfe640b143e674df" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded ndarray v0.13.1 [INFO] [stderr] Downloaded simba v0.2.0 [INFO] [stderr] Downloaded json5 v0.2.8 [INFO] [stderr] Downloaded hdf5-sys v0.7.0 [INFO] [stderr] Downloaded ndarray-stats v0.3.0 [INFO] [stderr] Downloaded netcdf v0.5.1 [INFO] [stderr] Downloaded netcdf-sys v0.3.2 [INFO] [stderr] Downloaded palette_derive v0.5.0 [INFO] [stderr] Downloaded noisy_float v0.1.13 [INFO] [stderr] Downloaded palette v0.5.0 [INFO] [stderr] Downloaded ndarray-parallel v0.9.1 [INFO] [stderr] Downloaded slice-of-array v0.2.1 [INFO] [stderr] Downloaded physical_constants v0.3.0 [INFO] [stderr] Downloaded arctk-proc v0.1.7 [INFO] [stderr] Downloaded arctk v0.10.1 [INFO] [stderr] Downloaded arctk-attr v0.1.5 [INFO] [stderr] Downloaded ansi_rgb v0.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+f47dd4da3ae8c32c9e65d307bfe640b143e674df" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 78e6d246a28223596ccae7686d8f0621cfd8875ae077f841782c82445a7c84b5 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "78e6d246a28223596ccae7686d8f0621cfd8875ae077f841782c82445a7c84b5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "78e6d246a28223596ccae7686d8f0621cfd8875ae077f841782c82445a7c84b5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "78e6d246a28223596ccae7686d8f0621cfd8875ae077f841782c82445a7c84b5", kill_on_drop: false }` [INFO] [stdout] 78e6d246a28223596ccae7686d8f0621cfd8875ae077f841782c82445a7c84b5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+f47dd4da3ae8c32c9e65d307bfe640b143e674df" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 739229fa90d20b2a0bb2729aa9b70c822f9543fd4fc1961e8af2f7c2989d7f8f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "739229fa90d20b2a0bb2729aa9b70c822f9543fd4fc1961e8af2f7c2989d7f8f", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling proc-macro2 v1.0.21 [INFO] [stderr] Compiling syn v1.0.41 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling libloading v0.6.3 [INFO] [stderr] Compiling rayon-core v1.8.0 [INFO] [stderr] Checking either v1.6.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.9 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling cc v1.0.60 [INFO] [stderr] Compiling siphasher v0.3.3 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling typenum v1.12.0 [INFO] [stderr] Compiling proc-macro-hack v0.5.18 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling netcdf-sys v0.3.2 [INFO] [stderr] Checking rawpointer v0.1.0 [INFO] [stderr] Checking adler32 v1.2.0 [INFO] [stderr] Checking hashbrown v0.9.0 [INFO] [stderr] Checking ucd-trie v0.1.3 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking bytemuck v1.4.1 [INFO] [stderr] Compiling physical_constants v0.3.0 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Checking number_prefix v0.3.0 [INFO] [stderr] Checking slice-of-array v0.2.1 [INFO] [stderr] Checking hex v0.4.2 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling rayon v1.4.0 [INFO] [stderr] Compiling indexmap v1.6.0 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Checking itertools v0.7.11 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Compiling phf_shared v0.8.0 [INFO] [stderr] Checking miniz_oxide v0.3.7 [INFO] [stderr] Checking pest v2.1.3 [INFO] [stderr] Checking rgb v0.8.25 [INFO] [stderr] Checking memchr v2.3.3 [INFO] [stderr] Checking byteorder v1.3.4 [INFO] [stderr] Checking bitflags v1.2.1 [INFO] [stderr] Checking ryu v1.0.5 [INFO] [stderr] Checking num-traits v0.2.12 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Checking phf v0.8.0 [INFO] [stderr] Checking ansi_rgb v0.2.0 [INFO] [stderr] Compiling paste-impl v0.1.18 [INFO] [stderr] Checking deflate v0.8.6 [INFO] [stderr] Compiling libz-sys v1.1.2 [INFO] [stderr] Checking crossbeam-channel v0.4.4 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Compiling getrandom v0.1.15 [INFO] [stderr] Checking png v0.16.7 [INFO] [stderr] Checking generic-array v0.13.2 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking noisy_float v0.1.13 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking termios v0.3.2 [INFO] [stderr] Checking terminal_size v0.1.13 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking colored v2.0.0 [INFO] [stderr] Checking regex v1.3.9 [INFO] [stderr] Compiling rand_pcg v0.2.1 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Checking paste v0.1.18 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling phf_generator v0.8.0 [INFO] [stderr] Compiling phf_codegen v0.8.0 [INFO] [stderr] Compiling palette v0.5.0 [INFO] [stderr] Checking rand_distr v0.2.2 [INFO] [stderr] Checking console v0.12.0 [INFO] [stderr] Checking indicatif v0.15.0 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-a830e8aed8222ddd/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x562e6564d080 - std::backtrace_rs::backtrace::libunwind::trace::he85dfb3ae4206056 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/../../backtrace/src/backtrace/libunwind.rs:96 [INFO] [stderr] 1: 0x562e6564d080 - std::backtrace_rs::backtrace::trace_unsynchronized::h1ad28094d7b00c21 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/../../backtrace/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x562e6564d080 - std::sys_common::backtrace::_print_fmt::h901b54610713cd21 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/sys_common/backtrace.rs:79 [INFO] [stderr] 3: 0x562e6564d080 - ::fmt::hb0ad78ee1571f7e0 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/sys_common/backtrace.rs:58 [INFO] [stderr] 4: 0x562e6566afec - core::fmt::write::h1857a60b204f1b6a [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/core/src/fmt/mod.rs:1080 [INFO] [stderr] 5: 0x562e65649fb2 - std::io::Write::write_fmt::hf7b7d7b243f84a36 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/io/mod.rs:1516 [INFO] [stderr] 6: 0x562e6564f3ad - std::sys_common::backtrace::_print::hd093978a5287b8ff [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/sys_common/backtrace.rs:61 [INFO] [stderr] 7: 0x562e6564f3ad - std::sys_common::backtrace::print::h20f46787581d56d7 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/sys_common/backtrace.rs:48 [INFO] [stderr] 8: 0x562e6564f3ad - std::panicking::default_hook::{{closure}}::h486cbb4b82ffc357 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panicking.rs:208 [INFO] [stderr] 9: 0x562e6564f058 - std::panicking::default_hook::h4190c9e3edd4d591 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panicking.rs:227 [INFO] [stderr] 10: 0x562e6564fa91 - std::panicking::rust_panic_with_hook::h72e78719cdda225c [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panicking.rs:577 [INFO] [stderr] 11: 0x562e6553a90c - std::panicking::begin_panic::{{closure}}::h497cb78843cdf61a [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panicking.rs:506 [INFO] [stderr] 12: 0x562e6553a789 - std::sys_common::backtrace::__rust_end_short_backtrace::h67fbadc0d60229cb [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/sys_common/backtrace.rs:153 [INFO] [stderr] 13: 0x562e6553a837 - std::panicking::begin_panic::h2cbc52d7f8506930 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panicking.rs:505 [INFO] [stderr] 14: 0x562e654221fc - build_script_build::LibrarySearcher::try_locate_hdf5_library::h4c1ea8e4175fae53 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549 [INFO] [stderr] 15: 0x562e65423abc - build_script_build::main::ha23fb580780f3079 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647 [INFO] [stderr] 16: 0x562e65429b9b - core::ops::function::FnOnce::call_once::h7fa24495dcc38e13 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/core/src/ops/function.rs:227 [INFO] [stderr] 17: 0x562e6543077e - std::sys_common::backtrace::__rust_begin_short_backtrace::hf004cf2b86d1b268 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/sys_common/backtrace.rs:137 [INFO] [stderr] 18: 0x562e6542f3a1 - std::rt::lang_start::{{closure}}::h4708fd2d637cd462 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/rt.rs:66 [INFO] [stderr] 19: 0x562e6564feb7 - core::ops::function::impls:: for &F>::call_once::h5e15f43ce28787f7 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/core/src/ops/function.rs:259 [INFO] [stderr] 20: 0x562e6564feb7 - std::panicking::try::do_call::h764f1891769113e9 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panicking.rs:381 [INFO] [stderr] 21: 0x562e6564feb7 - std::panicking::try::h0f2fe4fdd5e0ad19 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panicking.rs:345 [INFO] [stderr] 22: 0x562e6564feb7 - std::panic::catch_unwind::h1634e40dd3a19f80 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/panic.rs:382 [INFO] [stderr] 23: 0x562e6564feb7 - std::rt::lang_start_internal::h8d4bc7b854bbd5fe [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/rt.rs:51 [INFO] [stderr] 24: 0x562e6542f377 - std::rt::lang_start::h7eaa722adedea061 [INFO] [stderr] at /rustc/f47dd4da3ae8c32c9e65d307bfe640b143e674df/library/std/src/rt.rs:65 [INFO] [stderr] 25: 0x562e6542512a - main [INFO] [stderr] 26: 0x7fc2a67a50b3 - __libc_start_main [INFO] [stderr] 27: 0x562e6541d0be - _start [INFO] [stderr] 28: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "739229fa90d20b2a0bb2729aa9b70c822f9543fd4fc1961e8af2f7c2989d7f8f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "739229fa90d20b2a0bb2729aa9b70c822f9543fd4fc1961e8af2f7c2989d7f8f", kill_on_drop: false }` [INFO] [stdout] 739229fa90d20b2a0bb2729aa9b70c822f9543fd4fc1961e8af2f7c2989d7f8f