[INFO] fetching crate hdf5-rs 0.2.0... [INFO] checking hdf5-rs-0.2.0 against master#0d37dca25a51fb900a402c94c8818ad1c2789e30 for pr-77526 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-13/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain 0d37dca25a51fb900a402c94c8818ad1c2789e30 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0d37dca25a51fb900a402c94c8818ad1c2789e30" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-13/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0d37dca25a51fb900a402c94c8818ad1c2789e30" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+0d37dca25a51fb900a402c94c8818ad1c2789e30" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+0d37dca25a51fb900a402c94c8818ad1c2789e30" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] faf34613e557ed0f73eaadaf83f081184af985c0d8cf6777885435a22c05b7c8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "faf34613e557ed0f73eaadaf83f081184af985c0d8cf6777885435a22c05b7c8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "faf34613e557ed0f73eaadaf83f081184af985c0d8cf6777885435a22c05b7c8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "faf34613e557ed0f73eaadaf83f081184af985c0d8cf6777885435a22c05b7c8", kill_on_drop: false }` [INFO] [stdout] faf34613e557ed0f73eaadaf83f081184af985c0d8cf6777885435a22c05b7c8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+0d37dca25a51fb900a402c94c8818ad1c2789e30" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ad68aa8e47ec23d437dd2fcddaa3c382b52c28f9a11e351a5e4de376a58d9109 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "ad68aa8e47ec23d437dd2fcddaa3c382b52c28f9a11e351a5e4de376a58d9109", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.79 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling winapi-build v0.1.1 [INFO] [stderr] Checking winapi v0.2.8 [INFO] [stderr] Checking lazy_static v0.1.16 [INFO] [stderr] Checking remove_dir_all v0.5.3 [INFO] [stderr] Checking utf8-ranges v0.1.3 [INFO] [stderr] Checking regex-syntax v0.3.9 [INFO] [stderr] Compiling kernel32-sys v0.2.2 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-iter v0.1.41 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Checking memchr v0.1.11 [INFO] [stderr] Checking thread-id v2.0.0 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Checking thread_local v0.2.7 [INFO] [stderr] Checking aho-corasick v0.5.3 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06.build_script_build.173lawuc-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06.build_script_build.173lawuc-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06.build_script_build.173lawuc-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06.build_script_build.173lawuc-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06.build_script_build.173lawuc-cgu.4.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06.build_script_build.173lawuc-cgu.5.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06" "/opt/rustwide/target/debug/build/hdf5-rs-e6184df0febbcd06/build_script_build-e6184df0febbcd06.3d4srfqd3h1y1k9l.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-e5b129f1f1b61a73.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-edfba68bd3501617.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-cb36837ea2d84c1b.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-637cb1b53c807e95.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-099cf0af4375543b.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-b5f18e83369ef257.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-3bb19daa4485d5fe.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-5298ab0591e7fb29.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-2e4947d254d0b599.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-1532436f783b0405.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-3d12d76f5782439f.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-f54fb6b93a192d72.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-d41f1ff31e4e0f27.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-108e5e911ebb4fc8.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-31288459e6a43502.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-c52e5d6301e1bd59.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-2675a9a46b5cec89.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-f51baad7bbcb81c4.rlib" "-Wl,-Bdynamic" "-lhdf5" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff.build_script_build.9jr4e2ko-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff.build_script_build.9jr4e2ko-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff.build_script_build.9jr4e2ko-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff.build_script_build.9jr4e2ko-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff.build_script_build.9jr4e2ko-cgu.4.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff.build_script_build.9jr4e2ko-cgu.5.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff" "/opt/rustwide/target/debug/build/libhdf5-sys-1777ec9e7d29c5ff/build_script_build-1777ec9e7d29c5ff.59ta0jccnok67g6e.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-e5b129f1f1b61a73.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-edfba68bd3501617.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-cb36837ea2d84c1b.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-637cb1b53c807e95.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-099cf0af4375543b.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-b5f18e83369ef257.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-3bb19daa4485d5fe.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-5298ab0591e7fb29.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-2e4947d254d0b599.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-1532436f783b0405.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-3d12d76f5782439f.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-f54fb6b93a192d72.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-d41f1ff31e4e0f27.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-108e5e911ebb4fc8.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-31288459e6a43502.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-c52e5d6301e1bd59.rlib" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-2675a9a46b5cec89.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/0d37dca25a51fb900a402c94c8818ad1c2789e30/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-f51baad7bbcb81c4.rlib" "-Wl,-Bdynamic" "-lhdf5" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `hdf5-rs` [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "ad68aa8e47ec23d437dd2fcddaa3c382b52c28f9a11e351a5e4de376a58d9109", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ad68aa8e47ec23d437dd2fcddaa3c382b52c28f9a11e351a5e4de376a58d9109", kill_on_drop: false }` [INFO] [stdout] ad68aa8e47ec23d437dd2fcddaa3c382b52c28f9a11e351a5e4de376a58d9109