[INFO] cloning repository https://github.com/hisakatha/extract-bam-unique-alignment [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/hisakatha/extract-bam-unique-alignment" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhisakatha%2Fextract-bam-unique-alignment", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhisakatha%2Fextract-bam-unique-alignment'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] ea8276edeeb0db722d2b36832a19d00841aa91bf [INFO] checking hisakatha/extract-bam-unique-alignment against try#7c3a44cf5f95fa5cf164a312bdcf845157af7093 for pr-77325 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fhisakatha%2Fextract-bam-unique-alignment" "/workspace/builds/worker-13/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-13/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/hisakatha/extract-bam-unique-alignment on toolchain 7c3a44cf5f95fa5cf164a312bdcf845157af7093 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+7c3a44cf5f95fa5cf164a312bdcf845157af7093" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/hisakatha/extract-bam-unique-alignment [INFO] finished tweaking git repo https://github.com/hisakatha/extract-bam-unique-alignment [INFO] tweaked toml for git repo https://github.com/hisakatha/extract-bam-unique-alignment written to /workspace/builds/worker-13/source/Cargo.toml [INFO] crate git repo https://github.com/hisakatha/extract-bam-unique-alignment already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+7c3a44cf5f95fa5cf164a312bdcf845157af7093" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded bio-types v0.11.0 [INFO] [stderr] Downloaded libz-sys v1.1.3 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded derefable v0.1.0 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded rust-htslib v0.36.0 [INFO] [stderr] Downloaded curl-sys v0.4.42+curl-7.76.0 [INFO] [stderr] Downloaded openssl-src v111.15.0+1.1.1k [INFO] [stderr] Downloaded hts-sys v1.11.1-fix1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+7c3a44cf5f95fa5cf164a312bdcf845157af7093" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] d56c2805d69c43845abc1e71bc93659ebfea2fff18501f0f13bc0be8b0ba3584 [INFO] running `Command { std: "docker" "start" "-a" "d56c2805d69c43845abc1e71bc93659ebfea2fff18501f0f13bc0be8b0ba3584", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d56c2805d69c43845abc1e71bc93659ebfea2fff18501f0f13bc0be8b0ba3584", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d56c2805d69c43845abc1e71bc93659ebfea2fff18501f0f13bc0be8b0ba3584", kill_on_drop: false }` [INFO] [stdout] d56c2805d69c43845abc1e71bc93659ebfea2fff18501f0f13bc0be8b0ba3584 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:20528e8c29e4536546f0102ce88568b16ea7538393a33fcca951030f7af10457" "/opt/rustwide/cargo-home/bin/cargo" "+7c3a44cf5f95fa5cf164a312bdcf845157af7093" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c0864573ae386c1de0900898d4dd395027fd446b090b36291f5b0db8a5e128d2 [INFO] running `Command { std: "docker" "start" "-a" "c0864573ae386c1de0900898d4dd395027fd446b090b36291f5b0db8a5e128d2", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.72 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking tinyvec v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Checking unicode-bidi v0.3.5 [INFO] [stderr] Checking form_urlencoded v1.0.1 [INFO] [stderr] Compiling jobserver v0.1.22 [INFO] [stderr] Checking regex v1.5.4 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling cc v1.0.67 [INFO] [stderr] Compiling openssl-src v111.15.0+1.1.1k [INFO] [stderr] Checking unicode-normalization v0.1.17 [INFO] [stderr] Compiling openssl-sys v0.9.63 [INFO] [stderr] Compiling libz-sys v1.1.3 [INFO] [stderr] Compiling bzip2-sys v0.1.10+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.17 [INFO] [stderr] Compiling curl-sys v0.4.42+curl-7.76.0 [INFO] [stderr] Compiling hts-sys v1.11.1-fix1 [INFO] [stderr] Checking idna v0.2.3 [INFO] [stderr] Compiling derefable v0.1.0 [INFO] [stderr] Checking url v2.2.2 [INFO] [stderr] Compiling thiserror-impl v1.0.24 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Checking thiserror v1.0.24 [INFO] [stderr] Checking bio-types v0.11.0 [INFO] [stderr] Checking rust-htslib v0.36.0 [INFO] [stderr] Checking extract_bam_unique_alignment v1.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 45.95s [INFO] running `Command { std: "docker" "inspect" "c0864573ae386c1de0900898d4dd395027fd446b090b36291f5b0db8a5e128d2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c0864573ae386c1de0900898d4dd395027fd446b090b36291f5b0db8a5e128d2", kill_on_drop: false }` [INFO] [stdout] c0864573ae386c1de0900898d4dd395027fd446b090b36291f5b0db8a5e128d2