[INFO] fetching crate d4utils 0.1.16... [INFO] checking d4utils-0.1.16 against try#55b3f428b4fac6790b1e8492e0b91ff2d80aec7c for pr-77035 [INFO] extracting crate d4utils 0.1.16 into /workspace/builds/worker-9/source [INFO] validating manifest of crates.io crate d4utils 0.1.16 on toolchain 55b3f428b4fac6790b1e8492e0b91ff2d80aec7c [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+55b3f428b4fac6790b1e8492e0b91ff2d80aec7c" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate d4utils 0.1.16 [INFO] finished tweaking crates.io crate d4utils 0.1.16 [INFO] tweaked toml for crates.io crate d4utils 0.1.16 written to /workspace/builds/worker-9/source/Cargo.toml [INFO] crate crates.io crate d4utils 0.1.16 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+55b3f428b4fac6790b1e8492e0b91ff2d80aec7c" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded cpuprofiler v0.0.4 [INFO] [stderr] Downloaded d4-framefile v0.1.16 [INFO] [stderr] Downloaded d4-bigwig v0.1.16 [INFO] [stderr] Downloaded d4-hts v0.1.16 [INFO] [stderr] Downloaded d4 v0.1.16 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+55b3f428b4fac6790b1e8492e0b91ff2d80aec7c" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6726ed77c66fabf874bc11fb3ad45db86131dad1072a2bd440b3bb9d20b5e9ec [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "6726ed77c66fabf874bc11fb3ad45db86131dad1072a2bd440b3bb9d20b5e9ec", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6726ed77c66fabf874bc11fb3ad45db86131dad1072a2bd440b3bb9d20b5e9ec", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6726ed77c66fabf874bc11fb3ad45db86131dad1072a2bd440b3bb9d20b5e9ec", kill_on_drop: false }` [INFO] [stdout] 6726ed77c66fabf874bc11fb3ad45db86131dad1072a2bd440b3bb9d20b5e9ec [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-9/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:c8ac004eab7d63a0ad09a2dde3d3353ba464f767bee4de425dc8f74c46a1905e" "/opt/rustwide/cargo-home/bin/cargo" "+55b3f428b4fac6790b1e8492e0b91ff2d80aec7c" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7cd6e7e95c26364873749fba4e8baa0aa97428c55dd6453ddbf4ab5eb2bf8ef0 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "7cd6e7e95c26364873749fba4e8baa0aa97428c55dd6453ddbf4ab5eb2bf8ef0", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.80 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling serde v1.0.117 [INFO] [stderr] Compiling syn v1.0.53 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Compiling serde_json v1.0.59 [INFO] [stderr] Compiling serde_derive v1.0.117 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Compiling clang-sys v1.0.3 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling libloading v0.6.5 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking crossbeam-epoch v0.9.1 [INFO] [stderr] Compiling regex v1.4.2 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Checking getrandom v0.1.15 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Checking flate2 v1.0.19 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking rayon-core v1.9.0 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking plotters v0.2.15 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking rayon v1.5.0 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking d4-framefile v0.1.16 [INFO] [stderr] Compiling d4-hts v0.1.16 [INFO] [stderr] Compiling d4-bigwig v0.1.16 [INFO] [stderr] error: failed to run custom build command for `d4-bigwig v0.1.16` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-bigwig-f084f227468aa938/build-script-build` (exit code: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + cd /opt/rustwide/target/debug/build/d4-bigwig-8196412b2c11e3c4/out [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-bigwig-8196412b2c11e3c4/out/libBigWig [INFO] [stderr] + git clone -b 0.4.4 https://github.com/dpryan79/libBigWig [INFO] [stderr] Cloning into 'libBigWig'... [INFO] [stderr] fatal: unable to access 'https://github.com/dpryan79/libBigWig/': Could not resolve host: github.com [INFO] [stderr] + cd libBigWig [INFO] [stderr] build-lib.sh: line 12: cd: libBigWig: No such file or directory [INFO] [stderr] + perl -i -pe s/-lcurl//g Makefile [INFO] [stderr] Can't open Makefile: No such file or directory. [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] ++ grep musl [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + curl https://zlib.net/zlib-1.2.11.tar.gz [INFO] [stderr] + tar xz [INFO] [stderr] % Total % Received % Xferd Average Speed Time Time Time Current [INFO] [stderr] Dload Upload Total Spent Left Speed [INFO] [stderr] 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0curl: (6) Could not resolve host: zlib.net [INFO] [stderr] [INFO] [stderr] gzip: stdin: unexpected end of file [INFO] [stderr] tar: Child returned status 1 [INFO] [stderr] tar: Error is not recoverable: exiting now [INFO] [stderr] + cd zlib-1.2.11 [INFO] [stderr] build-lib.sh: line 29: cd: zlib-1.2.11: No such file or directory [INFO] [stderr] + is_musl [INFO] [stderr] ++ echo x86_64-unknown-linux-gnu [INFO] [stderr] ++ grep musl [INFO] [stderr] + '[' '!' -z ']' [INFO] [stderr] + return 1 [INFO] [stderr] + ./configure [INFO] [stderr] build-lib.sh: line 30: ./configure: No such file or directory [INFO] [stderr] + make [INFO] [stderr] make: *** No targets specified and no makefile found. Stop. [INFO] [stderr] + cp libz.a .. [INFO] [stderr] cp: cannot stat 'libz.a': No such file or directory [INFO] [stderr] + cd .. [INFO] [stderr] + CFLAGS='-DNOCURL -O3 -Izlib-1.2.11' [INFO] [stderr] + make -j8 lib-static [INFO] [stderr] make: *** No rule to make target 'lib-static'. Stop. [INFO] [stderr] thread 'main' panicked at 'assertion failed: Command::new(\"bash\").args(&[\"build-lib.sh\", lib_root.to_str().unwrap(),\n \"0.4.4\"]).spawn().expect(\"Unable to build libBigWig\").wait().unwrap().success()', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.16/build.rs:25:5 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5616e33cf837 - std::backtrace_rs::backtrace::libunwind::trace::h746c3e9529d524bc [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/../../backtrace/src/backtrace/libunwind.rs:90:5 [INFO] [stderr] 1: 0x5616e33cf837 - std::backtrace_rs::backtrace::trace_unsynchronized::h86340908ff889faa [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stderr] 2: 0x5616e33cf837 - std::sys_common::backtrace::_print_fmt::h43f85f9b18230404 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/sys_common/backtrace.rs:67:5 [INFO] [stderr] 3: 0x5616e33cf837 - ::fmt::hc132ae1a5b5aa7cd [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/sys_common/backtrace.rs:46:22 [INFO] [stderr] 4: 0x5616e33f5c1c - core::fmt::write::hdf023a0036d2a25f [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/core/src/fmt/mod.rs:1078:17 [INFO] [stderr] 5: 0x5616e33cbc92 - std::io::Write::write_fmt::h8580846154bcb66a [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/io/mod.rs:1519:15 [INFO] [stderr] 6: 0x5616e33d1bc5 - std::sys_common::backtrace::_print::h7ee55fed88d107a3 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/sys_common/backtrace.rs:49:5 [INFO] [stderr] 7: 0x5616e33d1bc5 - std::sys_common::backtrace::print::h54a7d3e52a524177 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/sys_common/backtrace.rs:36:9 [INFO] [stderr] 8: 0x5616e33d1bc5 - std::panicking::default_hook::{{closure}}::h60921e857bf55a40 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panicking.rs:208:50 [INFO] [stderr] 9: 0x5616e33d171a - std::panicking::default_hook::hf0f9afb1017317fc [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panicking.rs:225:9 [INFO] [stderr] 10: 0x5616e33d2361 - std::panicking::rust_panic_with_hook::h8d66bf42b407aaea [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panicking.rs:591:17 [INFO] [stderr] 11: 0x5616e33d1e77 - std::panicking::begin_panic_handler::{{closure}}::hde71edcd925d0c5e [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panicking.rs:495:13 [INFO] [stderr] 12: 0x5616e33cfcfc - std::sys_common::backtrace::__rust_end_short_backtrace::h8a3c7d6cea578919 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/sys_common/backtrace.rs:141:18 [INFO] [stderr] 13: 0x5616e33d1e09 - rust_begin_unwind [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panicking.rs:493:5 [INFO] [stderr] 14: 0x5616e33f42f1 - core::panicking::panic_fmt::h20225113c4a2f8fd [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/core/src/panicking.rs:92:14 [INFO] [stderr] 15: 0x5616e33f423d - core::panicking::panic::h35b77276aa4b0c12 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/core/src/panicking.rs:50:5 [INFO] [stderr] 16: 0x5616e2e388f9 - build_script_build::main::h1175f4dfc38d841f [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/d4-bigwig-0.1.16/build.rs:25:5 [INFO] [stderr] 17: 0x5616e2e3b45b - core::ops::function::FnOnce::call_once::h24fa34615835c6dc [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/core/src/ops/function.rs:227:5 [INFO] [stderr] 18: 0x5616e2e391ee - std::sys_common::backtrace::__rust_begin_short_backtrace::h13ba041cb11b077d [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/sys_common/backtrace.rs:125:18 [INFO] [stderr] 19: 0x5616e2e394c1 - std::rt::lang_start::{{closure}}::h072b2027c75d1266 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/rt.rs:66:18 [INFO] [stderr] 20: 0x5616e33d2877 - core::ops::function::impls:: for &F>::call_once::h54c39b9b8451875a [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/core/src/ops/function.rs:259:13 [INFO] [stderr] 21: 0x5616e33d2877 - std::panicking::try::do_call::hcdfba51a06e21b42 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panicking.rs:379:40 [INFO] [stderr] 22: 0x5616e33d2877 - std::panicking::try::hb36953ccd24f930d [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panicking.rs:343:19 [INFO] [stderr] 23: 0x5616e33d2877 - std::panic::catch_unwind::hbb374cd03beb3824 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/panic.rs:396:14 [INFO] [stderr] 24: 0x5616e33d2877 - std::rt::lang_start_internal::h97dca9624db2aa85 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/rt.rs:51:25 [INFO] [stderr] 25: 0x5616e2e39497 - std::rt::lang_start::hee4456d62c3000a2 [INFO] [stderr] at /rustc/55b3f428b4fac6790b1e8492e0b91ff2d80aec7c/library/std/src/rt.rs:65:5 [INFO] [stderr] 26: 0x5616e2e38baa - main [INFO] [stderr] 27: 0x7feaf2b590b3 - __libc_start_main [INFO] [stderr] 28: 0x5616e2e380be - _start [INFO] [stderr] 29: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "7cd6e7e95c26364873749fba4e8baa0aa97428c55dd6453ddbf4ab5eb2bf8ef0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7cd6e7e95c26364873749fba4e8baa0aa97428c55dd6453ddbf4ab5eb2bf8ef0", kill_on_drop: false }` [INFO] [stdout] 7cd6e7e95c26364873749fba4e8baa0aa97428c55dd6453ddbf4ab5eb2bf8ef0