[INFO] fetching crate libhdf5-sys 0.2.0... [INFO] checking libhdf5-sys-0.2.0 against try#b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f for pr-76104 [INFO] extracting crate libhdf5-sys 0.2.0 into /workspace/builds/worker-0/source [INFO] validating manifest of crates.io crate libhdf5-sys 0.2.0 on toolchain b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] finished tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] tweaked toml for crates.io crate libhdf5-sys 0.2.0 written to /workspace/builds/worker-0/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded libhdf5-lib v0.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] db8f6fc71161a4955adeb274924ff217579135fcc1af56b4f99411e0d85269f4 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "db8f6fc71161a4955adeb274924ff217579135fcc1af56b4f99411e0d85269f4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "db8f6fc71161a4955adeb274924ff217579135fcc1af56b4f99411e0d85269f4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "db8f6fc71161a4955adeb274924ff217579135fcc1af56b4f99411e0d85269f4", kill_on_drop: false }` [INFO] [stdout] db8f6fc71161a4955adeb274924ff217579135fcc1af56b4f99411e0d85269f4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 25566b37ecc7f64e6c4326c5cfa9211e2729ddec96605baa02b4ee6b71527ca0 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "25566b37ecc7f64e6c4326c5cfa9211e2729ddec96605baa02b4ee6b71527ca0", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.77 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33.build_script_build.a32hf2b5-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33.build_script_build.a32hf2b5-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33.build_script_build.a32hf2b5-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33.build_script_build.a32hf2b5-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33.build_script_build.a32hf2b5-cgu.4.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33.build_script_build.a32hf2b5-cgu.5.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33" "/opt/rustwide/target/debug/build/libhdf5-sys-3fbd7349f6f1ca33/build_script_build-3fbd7349f6f1ca33.3n5owha2r8zse614.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-a5fcd5f5042c995e.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-719fbbcc5aa10d9e.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-2b8f8dc3a13041a6.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-dec35b3159638863.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-54ba75ba19df3515.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-b4e081b17e50a5f3.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-e696cf3aebf90283.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-c9508c34f45c1407.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-fe83234631186fa0.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-06fdbacd679dd9b7.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-2c834b52f045959b.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-e184778e97c2340a.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-4a28d8f1751385f2.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-108e5e911ebb4fc8.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-d74f3c28111d31b0.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-c52e5d6301e1bd59.rlib" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-2675a9a46b5cec89.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/b1cc2963e8346ba1f5afb1edb86dbcf3f9ef0c5f/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-f6fccc8824a0c5ae.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `libhdf5-sys` [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `Command { std: "docker" "inspect" "25566b37ecc7f64e6c4326c5cfa9211e2729ddec96605baa02b4ee6b71527ca0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "25566b37ecc7f64e6c4326c5cfa9211e2729ddec96605baa02b4ee6b71527ca0", kill_on_drop: false }` [INFO] [stdout] 25566b37ecc7f64e6c4326c5cfa9211e2729ddec96605baa02b4ee6b71527ca0