[INFO] cloning repository https://github.com/HopedWall/GFAtoVCF
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/HopedWall/GFAtoVCF" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2FGFAtoVCF", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2FGFAtoVCF'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 0515bb676b975bb37d18ccafcd57bb55c1239249
[INFO] checking HopedWall/GFAtoVCF against master#de32266a1780aa4ef748ce7f6200a1554fad0aca for pr-75585
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHopedWall%2FGFAtoVCF" "/workspace/builds/worker-13/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-13/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/HopedWall/GFAtoVCF on toolchain de32266a1780aa4ef748ce7f6200a1554fad0aca
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+de32266a1780aa4ef748ce7f6200a1554fad0aca" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/HopedWall/GFAtoVCF
[INFO] finished tweaking git repo https://github.com/HopedWall/GFAtoVCF
[INFO] tweaked toml for git repo https://github.com/HopedWall/GFAtoVCF written to /workspace/builds/worker-13/source/Cargo.toml
[INFO] crate git repo https://github.com/HopedWall/GFAtoVCF already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+de32266a1780aa4ef748ce7f6200a1554fad0aca" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+de32266a1780aa4ef748ce7f6200a1554fad0aca" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 98c6abb1bf7d9b0ed8d82d004e4a1dcbf7caf5ef3a3cab829af9358c4c3482d3
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "98c6abb1bf7d9b0ed8d82d004e4a1dcbf7caf5ef3a3cab829af9358c4c3482d3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "98c6abb1bf7d9b0ed8d82d004e4a1dcbf7caf5ef3a3cab829af9358c4c3482d3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "98c6abb1bf7d9b0ed8d82d004e4a1dcbf7caf5ef3a3cab829af9358c4c3482d3", kill_on_drop: false }`
[INFO] [stdout] 98c6abb1bf7d9b0ed8d82d004e4a1dcbf7caf5ef3a3cab829af9358c4c3482d3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:d92eaeed33fa75130ca1ee6c8a01d1ffb62bac859dfdfb3450e3e5d1c0146529" "/opt/rustwide/cargo-home/bin/cargo" "+de32266a1780aa4ef748ce7f6200a1554fad0aca" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 678ac7968cae7ac099641455227004dd904bc133286a3d44ea28f101145872ae
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "678ac7968cae7ac099641455227004dd904bc133286a3d44ea28f101145872ae", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.0.0
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling libc v0.2.71
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling lexical-core v0.7.4
[INFO] [stderr]     Checking cfg-if v0.1.10
[INFO] [stderr]     Checking arrayvec v0.5.1
[INFO] [stderr]     Checking regex-syntax v0.6.18
[INFO] [stderr]     Checking static_assertions v1.1.0
[INFO] [stderr]    Compiling log v0.4.11
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking fixedbitset v0.2.0
[INFO] [stderr]     Checking strsim v0.8.0
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]     Checking ryu v1.0.5
[INFO] [stderr]     Checking thread_local v1.0.1
[INFO] [stderr]    Compiling indexmap v1.4.0
[INFO] [stderr]    Compiling num-traits v0.2.12
[INFO] [stderr]    Compiling num-integer v0.1.43
[INFO] [stderr]    Compiling priority-queue v1.0.0
[INFO] [stderr]     Checking aho-corasick v0.7.13
[INFO] [stderr]     Checking time v0.1.43
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr]     Checking petgraph v0.5.1
[INFO] [stderr]     Checking clap v2.33.1
[INFO] [stderr]     Checking chrono v0.4.11
[INFO] [stderr]     Checking regex v1.3.9
[INFO] [stderr]     Checking gfa v0.2.3
[INFO] [stderr]     Checking handlegraph v0.2.0
[INFO] [stderr]     Checking gfa_to_vcf v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 24.58s
[INFO] running `Command { std: "docker" "inspect" "678ac7968cae7ac099641455227004dd904bc133286a3d44ea28f101145872ae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "678ac7968cae7ac099641455227004dd904bc133286a3d44ea28f101145872ae", kill_on_drop: false }`
[INFO] [stdout] 678ac7968cae7ac099641455227004dd904bc133286a3d44ea28f101145872ae