[INFO] cloning repository https://github.com/esrice/trio_binning [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/esrice/trio_binning" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fesrice%2Ftrio_binning", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fesrice%2Ftrio_binning'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] b253f856c7979414f2a8346270715cb73779ccad [INFO] checking esrice/trio_binning against try#f6e2f78768c57172b99c3e85892f867894dc7e30 for pr-75502 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fesrice%2Ftrio_binning" "/workspace/builds/worker-13/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-13/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/esrice/trio_binning on toolchain f6e2f78768c57172b99c3e85892f867894dc7e30 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+f6e2f78768c57172b99c3e85892f867894dc7e30" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/esrice/trio_binning [INFO] finished tweaking git repo https://github.com/esrice/trio_binning [INFO] tweaked toml for git repo https://github.com/esrice/trio_binning written to /workspace/builds/worker-13/source/Cargo.toml [INFO] crate git repo https://github.com/esrice/trio_binning already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+f6e2f78768c57172b99c3e85892f867894dc7e30" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating git repository `https://github.com/rust-bio/rust-htslib.git` [INFO] [stderr] Updating git submodule `https://github.com/samtools/htslib.git` [INFO] [stderr] Updating git repository `https://github.com/alexcrichton/bzip2-rs.git` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded ieee754 v0.2.2 [INFO] [stderr] Downloaded wincolor v1.0.0 [INFO] [stderr] Downloaded env_logger v0.5.12 [INFO] [stderr] Downloaded proc-macro2 v0.4.13 [INFO] [stderr] Downloaded termcolor v1.0.1 [INFO] [stderr] Downloaded crossbeam-channel v0.2.4 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded lzma-sys v0.1.11 [INFO] [stderr] Downloaded clang-sys v0.22.0 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded buf_redux v0.7.1 [INFO] [stderr] Downloaded seq_io v0.3.0 [INFO] [stderr] Downloaded proc-macro2 v0.3.5 [INFO] [stderr] Downloaded fs-utils v1.1.0 [INFO] [stderr] Downloaded bio-types v0.2.0 [INFO] [stderr] Downloaded slice-deque v0.1.11 [INFO] [stderr] Downloaded serde_derive v1.0.72 [INFO] [stderr] Downloaded bindgen v0.36.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+f6e2f78768c57172b99c3e85892f867894dc7e30" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 2de5410aee0b6196b3843524462c642c5e601ab4de4456fda2841272c6bd46ee [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "2de5410aee0b6196b3843524462c642c5e601ab4de4456fda2841272c6bd46ee", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "2de5410aee0b6196b3843524462c642c5e601ab4de4456fda2841272c6bd46ee", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2de5410aee0b6196b3843524462c642c5e601ab4de4456fda2841272c6bd46ee", kill_on_drop: false }` [INFO] [stdout] 2de5410aee0b6196b3843524462c642c5e601ab4de4456fda2841272c6bd46ee [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+f6e2f78768c57172b99c3e85892f867894dc7e30" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e5dcea53bc1ff75502e7d5834ac6d77442f986fc64a4bbdd79f7d29b1a699a51 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e5dcea53bc1ff75502e7d5834ac6d77442f986fc64a4bbdd79f7d29b1a699a51", kill_on_drop: false }` [INFO] [stderr] Compiling version_check v0.1.4 [INFO] [stderr] Compiling cc v1.0.18 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling glob v0.2.11 [INFO] [stderr] Compiling pkg-config v0.3.14 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Checking scopeguard v0.3.3 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Checking nodrop v0.1.12 [INFO] [stderr] Checking stable_deref_trait v1.1.1 [INFO] [stderr] Compiling bitflags v1.0.3 [INFO] [stderr] Checking crossbeam-utils v0.5.0 [INFO] [stderr] Compiling termcolor v1.0.1 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling strsim v0.7.0 [INFO] [stderr] Compiling serde v1.0.72 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Checking memoffset v0.2.1 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Checking matches v0.1.8 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Checking ucd-util v0.1.1 [INFO] [stderr] Checking unicode-normalization v0.1.7 [INFO] [stderr] Checking utf8-ranges v1.0.0 [INFO] [stderr] Checking unicode-width v0.1.5 [INFO] [stderr] Checking either v1.5.0 [INFO] [stderr] Checking percent-encoding v1.0.1 [INFO] [stderr] Checking ieee754 v0.2.2 [INFO] [stderr] Checking bitflags v0.9.1 [INFO] [stderr] Compiling regex-syntax v0.6.2 [INFO] [stderr] Compiling log v0.4.4 [INFO] [stderr] Compiling humantime v1.1.1 [INFO] [stderr] Compiling fs-utils v1.1.0 [INFO] [stderr] Checking owning_ref v0.3.3 [INFO] [stderr] Compiling proc-macro2 v0.3.5 [INFO] [stderr] Checking arrayvec v0.4.7 [INFO] [stderr] Checking unicode-bidi v0.3.4 [INFO] [stderr] Checking itertools v0.6.5 [INFO] [stderr] Compiling libc v0.2.71 [INFO] [stderr] Compiling proc-macro2 v0.4.13 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling lazy_static v1.1.0 [INFO] [stderr] Checking rand v0.4.3 [INFO] [stderr] Checking memchr v2.0.1 [INFO] [stderr] Checking rand v0.5.5 [INFO] [stderr] Checking term_size v0.3.1 [INFO] [stderr] Checking slice-deque v0.1.11 [INFO] [stderr] Checking atty v0.2.11 [INFO] [stderr] Checking lock_api v0.1.3 [INFO] [stderr] Compiling clang-sys v0.22.0 [INFO] [stderr] Compiling quote v0.5.2 [INFO] [stderr] Checking aho-corasick v0.6.6 [INFO] [stderr] Checking textwrap v0.10.0 [INFO] [stderr] Compiling quote v0.6.8 [INFO] [stderr] Checking flate2 v1.0.14 [INFO] [stderr] Compiling memchr v1.0.2 [INFO] [stderr] Compiling which v1.0.5 [INFO] [stderr] Checking buf_redux v0.7.1 [INFO] [stderr] Checking clap v2.32.0 [INFO] [stderr] Compiling nom v3.2.1 [INFO] [stderr] Compiling syn v0.14.9 [INFO] [stderr] Checking parking_lot_core v0.2.14 [INFO] [stderr] Checking idna v0.1.5 [INFO] [stderr] Compiling libloading v0.5.0 [INFO] [stderr] Compiling bzip2-sys v0.1.6 (https://github.com/alexcrichton/bzip2-rs.git#54aef435) [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling lzma-sys v0.1.11 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling bindgen v0.36.1 [INFO] [stderr] Checking crossbeam-epoch v0.5.2 [INFO] [stderr] Checking crossbeam-deque v0.5.2 [INFO] [stderr] Checking parking_lot v0.6.3 [INFO] [stderr] Compiling regex v0.2.11 [INFO] [stderr] Checking url v1.7.1 [INFO] [stderr] Checking crossbeam-channel v0.2.4 [INFO] [stderr] Compiling regex v1.0.2 [INFO] [stderr] Compiling cexpr v0.2.3 [INFO] [stderr] Checking crossbeam v0.4.1 [INFO] [stderr] Compiling env_logger v0.5.12 [INFO] [stderr] Compiling serde_derive v1.0.72 [INFO] [stderr] Checking bio-types v0.2.0 [INFO] [stderr] Checking seq_io v0.3.0 [INFO] [stderr] Compiling rust-htslib v0.21.1-alpha.0 (https://github.com/rust-bio/rust-htslib.git?rev=1f9736e#1f9736ef) [INFO] [stderr] Checking trio_binning v0.2.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 57s [INFO] running `Command { std: "docker" "inspect" "e5dcea53bc1ff75502e7d5834ac6d77442f986fc64a4bbdd79f7d29b1a699a51", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e5dcea53bc1ff75502e7d5834ac6d77442f986fc64a4bbdd79f7d29b1a699a51", kill_on_drop: false }` [INFO] [stdout] e5dcea53bc1ff75502e7d5834ac6d77442f986fc64a4bbdd79f7d29b1a699a51