[INFO] fetching crate libhdf5-sys 0.2.0... [INFO] checking libhdf5-sys-0.2.0 against master#5e3f1b148db5bfa27fee52464ae1f5d34c49d77b for pr-75502 [INFO] extracting crate libhdf5-sys 0.2.0 into /workspace/builds/worker-1/source [INFO] validating manifest of crates.io crate libhdf5-sys 0.2.0 on toolchain 5e3f1b148db5bfa27fee52464ae1f5d34c49d77b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate libhdf5-sys 0.2.0 [INFO] finished tweaking crates.io crate libhdf5-sys 0.2.0 [INFO] tweaked toml for crates.io crate libhdf5-sys 0.2.0 written to /workspace/builds/worker-1/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:e18d859f9e32a1da89bc7b2d7d51e13b57342044d1295d9fc0dd0068c58eb3d1" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] d2efe609a1b2a95461edaeebe919826dcf1f4bb2e2d4796ad227e9c1ab04bba2 [INFO] running `Command { std: "docker" "start" "-a" "d2efe609a1b2a95461edaeebe919826dcf1f4bb2e2d4796ad227e9c1ab04bba2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d2efe609a1b2a95461edaeebe919826dcf1f4bb2e2d4796ad227e9c1ab04bba2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d2efe609a1b2a95461edaeebe919826dcf1f4bb2e2d4796ad227e9c1ab04bba2", kill_on_drop: false }` [INFO] [stdout] d2efe609a1b2a95461edaeebe919826dcf1f4bb2e2d4796ad227e9c1ab04bba2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:e18d859f9e32a1da89bc7b2d7d51e13b57342044d1295d9fc0dd0068c58eb3d1" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 149461ac410ef50b94ead3b21dde37774f5ef143ca4c4c3354fb837bf1bd85c8 [INFO] running `Command { std: "docker" "start" "-a" "149461ac410ef50b94ead3b21dde37774f5ef143ca4c4c3354fb837bf1bd85c8", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.76 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0.build_script_build.58hrwbyo-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0.build_script_build.58hrwbyo-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0.build_script_build.58hrwbyo-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0.build_script_build.58hrwbyo-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0.build_script_build.58hrwbyo-cgu.4.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0.build_script_build.58hrwbyo-cgu.5.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0" "/opt/rustwide/target/debug/build/libhdf5-sys-8a61f41ff7910dc0/build_script_build-8a61f41ff7910dc0.3ft739ic40lhd0cs.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-d495348145f42082.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-afd4b9aba051f3ad.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-855c562e2e292ca8.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-d3ba819e87cd569a.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-bc274aca94ac514e.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-295896dd3dec544f.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-e6f974cd84954b4f.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-5141c7ae54639e80.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-9932e6c4f8869949.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-c8ba78e795e00303.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-a9921f82b5a55bd5.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-44df78c2f03565fa.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-ea0728cf9a008cd6.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-f3a18966622d0f50.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-4343ad64ee16836e.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-d5cb1ea2004b66a0.rlib" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-1b9531b95148beca.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/5e3f1b148db5bfa27fee52464ae1f5d34c49d77b/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-d67a1d86fb8428ce.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] running `Command { std: "docker" "inspect" "149461ac410ef50b94ead3b21dde37774f5ef143ca4c4c3354fb837bf1bd85c8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "149461ac410ef50b94ead3b21dde37774f5ef143ca4c4c3354fb837bf1bd85c8", kill_on_drop: false }` [INFO] [stdout] 149461ac410ef50b94ead3b21dde37774f5ef143ca4c4c3354fb837bf1bd85c8