[INFO] fetching crate gchemol 0.0.41... [INFO] checking gchemol-0.0.41 against master#5e3f1b148db5bfa27fee52464ae1f5d34c49d77b for pr-75502 [INFO] extracting crate gchemol 0.0.41 into /workspace/builds/worker-6/source [INFO] validating manifest of crates.io crate gchemol 0.0.41 on toolchain 5e3f1b148db5bfa27fee52464ae1f5d34c49d77b [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate gchemol 0.0.41 [INFO] finished tweaking crates.io crate gchemol 0.0.41 [INFO] tweaked toml for crates.io crate gchemol 0.0.41 written to /workspace/builds/worker-6/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4304b3ff19dccf61e70476f2b479aed32c395eb31f81983495769a42c73375a1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4304b3ff19dccf61e70476f2b479aed32c395eb31f81983495769a42c73375a1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4304b3ff19dccf61e70476f2b479aed32c395eb31f81983495769a42c73375a1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4304b3ff19dccf61e70476f2b479aed32c395eb31f81983495769a42c73375a1", kill_on_drop: false }` [INFO] [stdout] 4304b3ff19dccf61e70476f2b479aed32c395eb31f81983495769a42c73375a1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bf5e6752f37ee0995219593e6b47df61b154fe50a935e0caffe8abe1fa206695 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "bf5e6752f37ee0995219593e6b47df61b154fe50a935e0caffe8abe1fa206695", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Checking cfg-if v0.1.10 [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling libc v0.2.76 [INFO] [stderr] Compiling syn v1.0.39 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling serde_derive v1.0.115 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling serde v1.0.115 [INFO] [stderr] Compiling libm v0.2.1 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking regex-syntax v0.6.18 [INFO] [stderr] Compiling maybe-uninit v2.0.0 [INFO] [stderr] Compiling rayon-core v1.8.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Checking either v1.6.0 [INFO] [stderr] Compiling unicode-segmentation v1.6.0 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Checking unicode-width v0.1.8 [INFO] [stderr] Checking quick-error v1.2.3 [INFO] [stderr] Checking ansi_term v0.11.0 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Compiling anyhow v1.0.32 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking strsim v0.8.0 [INFO] [stderr] Checking termcolor v1.1.0 [INFO] [stderr] Compiling ucd-trie v0.1.3 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling serde_json v1.0.57 [INFO] [stderr] Checking unic-common v0.9.0 [INFO] [stderr] Checking unic-char-range v0.9.0 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Compiling lexical-core v0.7.4 [INFO] [stderr] Checking fixedbitset v0.2.0 [INFO] [stderr] Checking arrayvec v0.5.1 [INFO] [stderr] Checking deunicode v0.4.3 [INFO] [stderr] Checking remove_dir_all v0.5.3 [INFO] [stderr] Checking quick-error v2.0.0 [INFO] [stderr] Checking humansize v1.1.0 [INFO] [stderr] Compiling typenum v1.12.0 [INFO] [stderr] Checking thread_local v1.0.1 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Checking textwrap v0.11.0 [INFO] [stderr] Checking humantime v1.3.0 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking unic-char-property v0.9.0 [INFO] [stderr] Compiling pest v2.1.3 [INFO] [stderr] Checking unic-ucd-version v0.9.0 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling heck v0.3.1 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling memoffset v0.5.5 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-rational v0.2.4 [INFO] [stderr] Compiling rayon v1.4.0 [INFO] [stderr] Compiling hashbrown v0.8.2 [INFO] [stderr] Compiling indexmap v1.5.1 [INFO] [stderr] Checking slug v0.1.4 [INFO] [stderr] Checking unic-ucd-segment v0.9.0 [INFO] [stderr] Checking aho-corasick v0.7.13 [INFO] [stderr] Checking bstr v0.2.13 [INFO] [stderr] Checking unic-segment v0.9.0 [INFO] [stderr] Checking crossbeam-channel v0.4.3 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling pest_meta v2.1.3 [INFO] [stderr] Checking getrandom v0.1.14 [INFO] [stderr] Checking atty v0.2.14 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking time v0.1.44 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking clap v2.33.3 [INFO] [stderr] Checking crossbeam-deque v0.7.3 [INFO] [stderr] Checking generic-array v0.13.2 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking regex v1.3.9 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking approx v0.3.2 [INFO] [stderr] Checking chrono v0.4.15 [INFO] [stderr] Checking env_logger v0.7.1 [INFO] [stderr] Checking globset v0.4.5 [INFO] [stderr] Checking rand_distr v0.2.2 [INFO] [stderr] Checking tempfile v3.1.0 [INFO] [stderr] Checking ignore v0.4.16 [INFO] [stderr] Checking pretty_env_logger v0.4.0 [INFO] [stderr] Compiling parse-zoneinfo v0.3.0 [INFO] [stderr] Checking globwalk v0.8.0 [INFO] [stderr] Compiling chrono-tz v0.5.2 [INFO] [stderr] Compiling pest_generator v2.1.3 [INFO] [stderr] Compiling structopt-derive v0.4.10 [INFO] [stderr] Compiling pest_derive v2.1.0 [INFO] [stderr] Checking structopt v0.3.17 [INFO] [stderr] Checking toml v0.5.6 [INFO] [stderr] Checking petgraph v0.5.1 [INFO] [stderr] Checking bimap v0.4.0 [INFO] [stderr] Checking envy v0.4.1 [INFO] [stderr] Checking alga v0.9.3 [INFO] [stderr] Checking handlebars v3.4.0 [INFO] [stderr] Checking tera v1.5.0 [INFO] [stderr] Checking gchemol-gut v0.1.3 [INFO] [stderr] Checking gchemol-parser v0.2.1 [INFO] [stderr] Checking nalgebra v0.20.0 [INFO] [stderr] Checking gchemol-graph v0.1.1 [INFO] [stderr] Checking vecfx v0.1.2 [INFO] [stderr] Checking octree v0.1.0 [INFO] [stderr] Checking gchemol-lattice v0.1.0 [INFO] [stderr] Checking gchemol-geometry v0.0.39 [INFO] [stderr] Checking gchemol-neighbors v0.1.0 [INFO] [stderr] Checking gchemol-core v0.0.42 [INFO] [stderr] Checking gchemol-readwrite v0.0.41 [INFO] [stderr] Checking gchemol v0.0.41 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused variable: `mol` [INFO] [stdout] --> tests/io.rs:44:9 [INFO] [stdout] | [INFO] [stdout] 44 | for mol in gchemol::io::read(&f).expect("read mol2") { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_mol` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `gchemol::prelude::*` [INFO] [stdout] --> tests/molecule.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use gchemol::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 1 warning emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 54s [INFO] running `Command { std: "docker" "inspect" "bf5e6752f37ee0995219593e6b47df61b154fe50a935e0caffe8abe1fa206695", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bf5e6752f37ee0995219593e6b47df61b154fe50a935e0caffe8abe1fa206695", kill_on_drop: false }` [INFO] [stdout] bf5e6752f37ee0995219593e6b47df61b154fe50a935e0caffe8abe1fa206695