[INFO] cloning repository https://github.com/chfi/gfa-bubbles
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/chfi/gfa-bubbles" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Fgfa-bubbles", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Fgfa-bubbles'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b3c375f5d1567140f3a0af1cc5c083234771b320
[INFO] checking chfi/gfa-bubbles against master#5e3f1b148db5bfa27fee52464ae1f5d34c49d77b for pr-75502
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fchfi%2Fgfa-bubbles" "/workspace/builds/worker-10/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-10/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/chfi/gfa-bubbles on toolchain 5e3f1b148db5bfa27fee52464ae1f5d34c49d77b
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/chfi/gfa-bubbles
[INFO] finished tweaking git repo https://github.com/chfi/gfa-bubbles
[INFO] tweaked toml for git repo https://github.com/chfi/gfa-bubbles written to /workspace/builds/worker-10/source/Cargo.toml
[INFO] crate git repo https://github.com/chfi/gfa-bubbles already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr] error: the lock file /workspace/builds/worker-10/source/Cargo.lock needs to be updated but --locked was passed to prevent this
[INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag.
[INFO] the lockfile is outdated, regenerating it
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }`
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 573518445af38b433217138609192c6b2be6c2a31f52479704344c98e0c4d875
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "573518445af38b433217138609192c6b2be6c2a31f52479704344c98e0c4d875", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "573518445af38b433217138609192c6b2be6c2a31f52479704344c98e0c4d875", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "573518445af38b433217138609192c6b2be6c2a31f52479704344c98e0c4d875", kill_on_drop: false }`
[INFO] [stdout] 573518445af38b433217138609192c6b2be6c2a31f52479704344c98e0c4d875
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] aa58a309ec7b15c5f80d2d4ae63184617d5a9220877285617591adf9a9f665b2
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "aa58a309ec7b15c5f80d2d4ae63184617d5a9220877285617591adf9a9f665b2", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]    Compiling version_check v0.9.2
[INFO] [stderr]     Checking cfg-if v0.1.10
[INFO] [stderr]     Checking regex-syntax v0.6.18
[INFO] [stderr]     Checking thread_local v1.0.1
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]     Checking aho-corasick v0.7.13
[INFO] [stderr]     Checking lexical-core v0.7.4
[INFO] [stderr]     Checking regex v1.3.9
[INFO] [stderr]     Checking gfa v0.2.3
[INFO] [stderr]     Checking handlegraph v0.1.0
[INFO] [stderr]     Checking gfabubbles v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused variable: `loop_ends`
[INFO] [stdout]    --> src/main.rs:142:9
[INFO] [stdout]     |
[INFO] [stdout] 142 |     let mut loop_ends: Vec<NodeId> = Vec::new();
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_loop_ends`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `loop_ends`
[INFO] [stdout]    --> src/main.rs:142:9
[INFO] [stdout]     |
[INFO] [stdout] 142 |     let mut loop_ends: Vec<NodeId> = Vec::new();
[INFO] [stdout]     |         ^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_loop_ends`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:142:9
[INFO] [stdout]     |
[INFO] [stdout] 142 |     let mut loop_ends: Vec<NodeId> = Vec::new();
[INFO] [stdout]     |         ----^^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]    --> src/main.rs:142:9
[INFO] [stdout]     |
[INFO] [stdout] 142 |     let mut loop_ends: Vec<NodeId> = Vec::new();
[INFO] [stdout]     |         ----^^^^^^^^^
[INFO] [stdout]     |         |
[INFO] [stdout]     |         help: remove this `mut`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_mut)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 19.47s
[INFO] running `Command { std: "docker" "inspect" "aa58a309ec7b15c5f80d2d4ae63184617d5a9220877285617591adf9a9f665b2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "aa58a309ec7b15c5f80d2d4ae63184617d5a9220877285617591adf9a9f665b2", kill_on_drop: false }`
[INFO] [stdout] aa58a309ec7b15c5f80d2d4ae63184617d5a9220877285617591adf9a9f665b2