[INFO] cloning repository https://github.com/10XGenomics/rust-pseudoaligner
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/10XGenomics/rust-pseudoaligner" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 8533e36a8c7c70de23b57b088d382139fd4d6a2c
[INFO] checking 10XGenomics/rust-pseudoaligner against master#5e3f1b148db5bfa27fee52464ae1f5d34c49d77b for pr-75502
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Frust-pseudoaligner" "/workspace/builds/worker-8/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-8/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/rust-pseudoaligner on toolchain 5e3f1b148db5bfa27fee52464ae1f5d34c49d77b
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] finished tweaking git repo https://github.com/10XGenomics/rust-pseudoaligner
[INFO] tweaked toml for git repo https://github.com/10XGenomics/rust-pseudoaligner written to /workspace/builds/worker-8/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/rust-pseudoaligner already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 2b7b31f7c5a3c25903f960b91576d775bbf7e6a23bf925ccbbf4e5f0b7e76ea2
[INFO] running `Command { std: "docker" "start" "-a" "2b7b31f7c5a3c25903f960b91576d775bbf7e6a23bf925ccbbf4e5f0b7e76ea2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "2b7b31f7c5a3c25903f960b91576d775bbf7e6a23bf925ccbbf4e5f0b7e76ea2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2b7b31f7c5a3c25903f960b91576d775bbf7e6a23bf925ccbbf4e5f0b7e76ea2", kill_on_drop: false }`
[INFO] [stdout] 2b7b31f7c5a3c25903f960b91576d775bbf7e6a23bf925ccbbf4e5f0b7e76ea2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-8/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+5e3f1b148db5bfa27fee52464ae1f5d34c49d77b" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6484d49ef2b06e2d99d61aa6f1c0cdac47d1aab6281df6e37bba50f19f7bd5f3
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "6484d49ef2b06e2d99d61aa6f1c0cdac47d1aab6281df6e37bba50f19f7bd5f3", kill_on_drop: false }`
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[INFO] [stderr]    Compiling rustc_version v0.2.3
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[INFO] [stderr]    Compiling parking_lot_core v0.6.2
[INFO] [stderr]    Compiling parking_lot v0.9.0
[INFO] [stderr]    Compiling cargo_metadata v0.6.4
[INFO] [stderr]     Checking csv v1.1.3
[INFO] [stderr]     Checking crossbeam-deque v0.7.2
[INFO] [stderr]    Compiling skeptic v0.13.4
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[INFO] [stderr]     Checking rayon v1.3.0
[INFO] [stderr]    Compiling lz4 v1.23.1
[INFO] [stderr]     Checking shardio v0.7.1
[INFO] [stderr]     Checking boomphf v0.5.2
[INFO] [stderr]     Checking debruijn v0.3.0 (https://github.com/10XGenomics/rust-debruijn#dc41dd29)
[INFO] [stderr]     Checking debruijn_mapping v0.4.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unnecessary parentheses around type
[INFO] [stdout]    --> src/mappability.rs:120:67
[INFO] [stdout]     |
[INFO] [stdout] 120 | pub fn analyze_graph<K: Kmer>(index: &Pseudoaligner<K>) -> Result<(Vec<MappabilityRecord>), Error> {
[INFO] [stdout]     |                                                                   ^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `debruijn::msp::simple_scan`: Please use the `Scanner` type instead 
[INFO] [stdout]    --> src/build_index.rs:252:20
[INFO] [stdout]     |
[INFO] [stdout] 252 |         let msps = debruijn::msp::simple_scan::<_, PmerType>(K::k(), contig, &PERM, !STRANDED);
[INFO] [stdout]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around type
[INFO] [stdout]    --> src/mappability.rs:120:67
[INFO] [stdout]     |
[INFO] [stdout] 120 | pub fn analyze_graph<K: Kmer>(index: &Pseudoaligner<K>) -> Result<(Vec<MappabilityRecord>), Error> {
[INFO] [stdout]     |                                                                   ^^^^^^^^^^^^^^^^^^^^^^^^ help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: use of deprecated function `debruijn::msp::simple_scan`: Please use the `Scanner` type instead 
[INFO] [stdout]    --> src/build_index.rs:252:20
[INFO] [stdout]     |
[INFO] [stdout] 252 |         let msps = debruijn::msp::simple_scan::<_, PmerType>(K::k(), contig, &PERM, !STRANDED);
[INFO] [stdout]     |                    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 2 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function is never used: `test_gencode_full_build`
[INFO] [stdout]    --> src/build_index.rs:402:8
[INFO] [stdout]     |
[INFO] [stdout] 402 |     fn test_gencode_full_build() -> Result<(), Error> {
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: 3 warnings emitted
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3m 23s
[INFO] running `Command { std: "docker" "inspect" "6484d49ef2b06e2d99d61aa6f1c0cdac47d1aab6281df6e37bba50f19f7bd5f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6484d49ef2b06e2d99d61aa6f1c0cdac47d1aab6281df6e37bba50f19f7bd5f3", kill_on_drop: false }`
[INFO] [stdout] 6484d49ef2b06e2d99d61aa6f1c0cdac47d1aab6281df6e37bba50f19f7bd5f3