[INFO] fetching crate hdf5-derive 0.6.1... [INFO] checking hdf5-derive-0.6.1 against master#119d2a1a98fe87d4ae6cabf12134a0ef2fb95851 for pr-75180 [INFO] extracting crate hdf5-derive 0.6.1 into /workspace/builds/worker-7/source [INFO] validating manifest of crates.io crate hdf5-derive 0.6.1 on toolchain 119d2a1a98fe87d4ae6cabf12134a0ef2fb95851 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-derive 0.6.1 [INFO] finished tweaking crates.io crate hdf5-derive 0.6.1 [INFO] tweaked toml for crates.io crate hdf5-derive 0.6.1 written to /workspace/builds/worker-7/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a0e476fb9867cfc5042022c77ebb48b8f37441bca63b9339eacddda4c4586a90 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "a0e476fb9867cfc5042022c77ebb48b8f37441bca63b9339eacddda4c4586a90", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a0e476fb9867cfc5042022c77ebb48b8f37441bca63b9339eacddda4c4586a90", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a0e476fb9867cfc5042022c77ebb48b8f37441bca63b9339eacddda4c4586a90", kill_on_drop: false }` [INFO] [stdout] a0e476fb9867cfc5042022c77ebb48b8f37441bca63b9339eacddda4c4586a90 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 31bf5d96f987677fd35229ee9e4b46c2c05709db5d9008106e9f80495d358a02 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "31bf5d96f987677fd35229ee9e4b46c2c05709db5d9008106e9f80495d358a02", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling libc v0.2.76 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling libloading v0.6.3 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling serde v1.0.115 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Checking unicode-xid v0.2.1 [INFO] [stderr] Checking smallvec v1.4.2 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking itoa v0.4.6 [INFO] [stderr] Compiling hdf5 v0.7.0 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Checking glob v0.3.0 [INFO] [stderr] Checking lock_api v0.3.4 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Checking proc-macro2 v1.0.19 [INFO] [stderr] Compiling hdf5-derive v0.7.0 [INFO] [stderr] Compiling hdf5-derive v0.6.1 (/opt/rustwide/workdir) [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Checking quote v1.0.7 [INFO] [stderr] Checking syn v1.0.39 [INFO] [stderr] Checking parking_lot_core v0.7.2 [INFO] [stderr] Checking hdf5-types v0.7.0 [INFO] [stderr] Checking parking_lot v0.10.2 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Checking serde_json v1.0.57 [INFO] [stderr] Checking toml v0.5.6 [INFO] [stderr] Compiling hdf5-sys v0.7.0 [INFO] [stderr] Checking trybuild v1.0.32 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.7.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-a830e8aed8222ddd/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55aeafcdbe1f - std::backtrace_rs::backtrace::libunwind::trace::h21c0966c343fddd8 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/../../backtrace/src/backtrace/libunwind.rs:96 [INFO] [stderr] 1: 0x55aeafcdbe1f - std::backtrace_rs::backtrace::trace_unsynchronized::h62cde0754779ae3a [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/../../backtrace/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55aeafcdbe1f - std::sys_common::backtrace::_print_fmt::hb2d70198918acf1c [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/sys_common/backtrace.rs:77 [INFO] [stderr] 3: 0x55aeafcdbe1f - ::fmt::h5a9d4ddd4d99b877 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/sys_common/backtrace.rs:58 [INFO] [stderr] 4: 0x55aeafcfbb2c - core::fmt::write::h3a043650ba7bf668 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/core/src/fmt/mod.rs:1117 [INFO] [stderr] 5: 0x55aeafcd8cf5 - std::io::Write::write_fmt::h2dbf1bb0d9f42142 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/io/mod.rs:1510 [INFO] [stderr] 6: 0x55aeafcde420 - std::sys_common::backtrace::_print::h1091565a54a3c462 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/sys_common/backtrace.rs:61 [INFO] [stderr] 7: 0x55aeafcde420 - std::sys_common::backtrace::print::hc9759e13a502cda2 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/sys_common/backtrace.rs:48 [INFO] [stderr] 8: 0x55aeafcde420 - std::panicking::default_hook::{{closure}}::hd35b8516a1d88160 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/panicking.rs:198 [INFO] [stderr] 9: 0x55aeafcde16c - std::panicking::default_hook::h0dcf88ad4d72ec5e [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/panicking.rs:217 [INFO] [stderr] 10: 0x55aeafcdea63 - std::panicking::rust_panic_with_hook::h81c308f7accbe523 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/panicking.rs:526 [INFO] [stderr] 11: 0x55aeafbc74b9 - std::panicking::begin_panic::h9fc99e000a3e42fe [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/panicking.rs:456 [INFO] [stderr] 12: 0x55aeafaad30c - build_script_build::LibrarySearcher::try_locate_hdf5_library::h1a8debf50be8b578 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:549 [INFO] [stderr] 13: 0x55aeafaaec91 - build_script_build::main::ha23fb580780f3079 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.7.0/build.rs:647 [INFO] [stderr] 14: 0x55aeafaba87b - std::rt::lang_start::{{closure}}::hffaf813fb942611a [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/rt.rs:67 [INFO] [stderr] 15: 0x55aeafcdee76 - std::rt::lang_start_internal::{{closure}}::hdb90dc0481c9e8f6 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/rt.rs:52 [INFO] [stderr] 16: 0x55aeafcdee76 - std::panicking::try::do_call::he0af14a67f26ea71 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/panicking.rs:348 [INFO] [stderr] 17: 0x55aeafcdee76 - std::panicking::try::h87d5f0e2c2fee1c5 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/panicking.rs:325 [INFO] [stderr] 18: 0x55aeafcdee76 - std::panic::catch_unwind::he9266eec484f0287 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/panic.rs:394 [INFO] [stderr] 19: 0x55aeafcdee76 - std::rt::lang_start_internal::hb54283a40e32dc37 [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/rt.rs:51 [INFO] [stderr] 20: 0x55aeafaba857 - std::rt::lang_start::had6f97889ac620cc [INFO] [stderr] at /rustc/119d2a1a98fe87d4ae6cabf12134a0ef2fb95851/library/std/src/rt.rs:67 [INFO] [stderr] 21: 0x55aeafab03ba - main [INFO] [stderr] 22: 0x7f883eaaa0b3 - __libc_start_main [INFO] [stderr] 23: 0x55aeafaa80be - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "31bf5d96f987677fd35229ee9e4b46c2c05709db5d9008106e9f80495d358a02", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "31bf5d96f987677fd35229ee9e4b46c2c05709db5d9008106e9f80495d358a02", kill_on_drop: false }` [INFO] [stdout] 31bf5d96f987677fd35229ee9e4b46c2c05709db5d9008106e9f80495d358a02