[INFO] fetching crate genomics 0.1.1... [INFO] checking genomics-0.1.1 against master#119d2a1a98fe87d4ae6cabf12134a0ef2fb95851 for pr-75180 [INFO] extracting crate genomics 0.1.1 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate genomics 0.1.1 on toolchain 119d2a1a98fe87d4ae6cabf12134a0ef2fb95851 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate genomics 0.1.1 [INFO] finished tweaking crates.io crate genomics 0.1.1 [INFO] tweaked toml for crates.io crate genomics 0.1.1 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] cf290f05b7228f2d2da86e618adc8fd653dd673f8c20554d2c75fd47be8cf9a5 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "cf290f05b7228f2d2da86e618adc8fd653dd673f8c20554d2c75fd47be8cf9a5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "cf290f05b7228f2d2da86e618adc8fd653dd673f8c20554d2c75fd47be8cf9a5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cf290f05b7228f2d2da86e618adc8fd653dd673f8c20554d2c75fd47be8cf9a5", kill_on_drop: false }` [INFO] [stdout] cf290f05b7228f2d2da86e618adc8fd653dd673f8c20554d2c75fd47be8cf9a5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+119d2a1a98fe87d4ae6cabf12134a0ef2fb95851" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 760f7537f9fd23f00fc73eedc3d642a6771d678647a3b0960da6b06f63f2b483 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "760f7537f9fd23f00fc73eedc3d642a6771d678647a3b0960da6b06f63f2b483", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling serde v1.0.115 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Checking csv-core v0.1.10 [INFO] [stderr] Checking regex-automata v0.1.9 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Checking bstr v0.2.13 [INFO] [stderr] Checking csv v1.1.3 [INFO] [stderr] Checking genomics v0.1.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `crate::prelude::*` [INFO] [stdout] --> src/observable.rs:245:9 [INFO] [stdout] | [INFO] [stdout] 245 | use crate::prelude::*; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `idx` [INFO] [stdout] --> src/observable.rs:118:23 [INFO] [stdout] | [INFO] [stdout] 118 | Some((idx, Err(_))) => { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_idx` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variant is never constructed: `Locus` [INFO] [stdout] --> src/observable.rs:33:5 [INFO] [stdout] | [INFO] [stdout] 33 | Locus(String), [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variant is never constructed: `Name` [INFO] [stdout] --> src/observable.rs:34:5 [INFO] [stdout] | [INFO] [stdout] 34 | Name, [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variant is never constructed: `Group` [INFO] [stdout] --> src/observable.rs:35:5 [INFO] [stdout] | [INFO] [stdout] 35 | Group, [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variant is never constructed: `GroupPresence` [INFO] [stdout] --> src/observable.rs:36:5 [INFO] [stdout] | [INFO] [stdout] 36 | GroupPresence(String), [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variant is never constructed: `Meta` [INFO] [stdout] --> src/observable.rs:37:5 [INFO] [stdout] | [INFO] [stdout] 37 | Meta(String), [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `new` [INFO] [stdout] --> src/observable.rs:53:8 [INFO] [stdout] | [INFO] [stdout] 53 | fn new( [INFO] [stdout] | ^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct is never constructed: `CsvBuilder` [INFO] [stdout] --> src/observable.rs:128:12 [INFO] [stdout] | [INFO] [stdout] 128 | pub struct CsvBuilder { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `new` [INFO] [stdout] --> src/observable.rs:141:12 [INFO] [stdout] | [INFO] [stdout] 141 | pub fn new() -> Self { [INFO] [stdout] | ^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `headers` [INFO] [stdout] --> src/observable.rs:154:12 [INFO] [stdout] | [INFO] [stdout] 154 | pub fn headers(&mut self, headers: bool) -> &mut Self { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `delimiter` [INFO] [stdout] --> src/observable.rs:159:12 [INFO] [stdout] | [INFO] [stdout] 159 | pub fn delimiter(&mut self, delimiter: u8) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `separator` [INFO] [stdout] --> src/observable.rs:164:12 [INFO] [stdout] | [INFO] [stdout] 164 | pub fn separator(&mut self, separator: &str) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `name_field` [INFO] [stdout] --> src/observable.rs:169:12 [INFO] [stdout] | [INFO] [stdout] 169 | pub fn name_field(&mut self, name_field: &str) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `group_field` [INFO] [stdout] --> src/observable.rs:174:12 [INFO] [stdout] | [INFO] [stdout] 174 | pub fn group_field(&mut self, group_field: &str) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `group_fields` [INFO] [stdout] --> src/observable.rs:179:12 [INFO] [stdout] | [INFO] [stdout] 179 | pub fn group_fields( [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `meta_fields` [INFO] [stdout] --> src/observable.rs:189:12 [INFO] [stdout] | [INFO] [stdout] 189 | pub fn meta_fields(&mut self, meta_fields: HashSet) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `from_reader` [INFO] [stdout] --> src/observable.rs:194:12 [INFO] [stdout] | [INFO] [stdout] 194 | pub fn from_reader(&self, reader: Box) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `hint` [INFO] [stdout] --> src/lib.rs:54:5 [INFO] [stdout] | [INFO] [stdout] 54 | hint: LocusHint, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `name` [INFO] [stdout] --> src/lib.rs:93:5 [INFO] [stdout] | [INFO] [stdout] 93 | name: String, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `data` [INFO] [stdout] --> src/lib.rs:111:5 [INFO] [stdout] | [INFO] [stdout] 111 | data: ndarray::Array2, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 20 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `idx` [INFO] [stdout] --> src/observable.rs:118:23 [INFO] [stdout] | [INFO] [stdout] 118 | Some((idx, Err(_))) => { [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_idx` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `headers` [INFO] [stdout] --> src/observable.rs:154:12 [INFO] [stdout] | [INFO] [stdout] 154 | pub fn headers(&mut self, headers: bool) -> &mut Self { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `delimiter` [INFO] [stdout] --> src/observable.rs:159:12 [INFO] [stdout] | [INFO] [stdout] 159 | pub fn delimiter(&mut self, delimiter: u8) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `separator` [INFO] [stdout] --> src/observable.rs:164:12 [INFO] [stdout] | [INFO] [stdout] 164 | pub fn separator(&mut self, separator: &str) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `name_field` [INFO] [stdout] --> src/observable.rs:169:12 [INFO] [stdout] | [INFO] [stdout] 169 | pub fn name_field(&mut self, name_field: &str) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `group_field` [INFO] [stdout] --> src/observable.rs:174:12 [INFO] [stdout] | [INFO] [stdout] 174 | pub fn group_field(&mut self, group_field: &str) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `group_fields` [INFO] [stdout] --> src/observable.rs:179:12 [INFO] [stdout] | [INFO] [stdout] 179 | pub fn group_fields( [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated function is never used: `meta_fields` [INFO] [stdout] --> src/observable.rs:189:12 [INFO] [stdout] | [INFO] [stdout] 189 | pub fn meta_fields(&mut self, meta_fields: HashSet) -> &mut Self { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `hint` [INFO] [stdout] --> src/lib.rs:54:5 [INFO] [stdout] | [INFO] [stdout] 54 | hint: LocusHint, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `name` [INFO] [stdout] --> src/lib.rs:93:5 [INFO] [stdout] | [INFO] [stdout] 93 | name: String, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field is never read: `data` [INFO] [stdout] --> src/lib.rs:111:5 [INFO] [stdout] | [INFO] [stdout] 111 | data: ndarray::Array2, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused `std::result::Result` that must be used [INFO] [stdout] --> src/observable.rs:250:9 [INFO] [stdout] | [INFO] [stdout] 250 | / sample.observe( [INFO] [stdout] 251 | | CsvBuilder::new() [INFO] [stdout] 252 | | .from_reader( [INFO] [stdout] 253 | | Box::new("test\n0/0".as_bytes()) [INFO] [stdout] 254 | | )? [INFO] [stdout] 255 | | ); [INFO] [stdout] | |__________^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_must_use)]` on by default [INFO] [stdout] = note: this `Result` may be an `Err` variant, which should be handled [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 13 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 19.75s [INFO] running `Command { std: "docker" "inspect" "760f7537f9fd23f00fc73eedc3d642a6771d678647a3b0960da6b06f63f2b483", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "760f7537f9fd23f00fc73eedc3d642a6771d678647a3b0960da6b06f63f2b483", kill_on_drop: false }` [INFO] [stdout] 760f7537f9fd23f00fc73eedc3d642a6771d678647a3b0960da6b06f63f2b483