[INFO] crate hdf5 0.6.1 is already in cache [INFO] checking hdf5-0.6.1 against try#22dd2dd1dc07f63ae9394352d412f020d2985684 for pr-74627 [INFO] extracting crate hdf5 0.6.1 into /workspace/builds/worker-11/source [INFO] validating manifest of crates.io crate hdf5 0.6.1 on toolchain 22dd2dd1dc07f63ae9394352d412f020d2985684 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+22dd2dd1dc07f63ae9394352d412f020d2985684" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5 0.6.1 [INFO] finished tweaking crates.io crate hdf5 0.6.1 [INFO] tweaked toml for crates.io crate hdf5 0.6.1 written to /workspace/builds/worker-11/source/Cargo.toml [INFO] crate crates.io crate hdf5 0.6.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+22dd2dd1dc07f63ae9394352d412f020d2985684" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+22dd2dd1dc07f63ae9394352d412f020d2985684" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 21d8f22b793ac259196842f1cedc13625394ae20ed837aaf754f823aec47e423 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "21d8f22b793ac259196842f1cedc13625394ae20ed837aaf754f823aec47e423", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "21d8f22b793ac259196842f1cedc13625394ae20ed837aaf754f823aec47e423", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "21d8f22b793ac259196842f1cedc13625394ae20ed837aaf754f823aec47e423", kill_on_drop: false }` [INFO] [stdout] 21d8f22b793ac259196842f1cedc13625394ae20ed837aaf754f823aec47e423 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-11/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+22dd2dd1dc07f63ae9394352d412f020d2985684" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1a25dacff8f4738dae7d062a0f92467f7b0ca34490b3387ac99f2a4689292c2c [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "1a25dacff8f4738dae7d062a0f92467f7b0ca34490b3387ac99f2a4689292c2c", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.68 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling libloading v0.6.0 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling proc-macro-hack-impl v0.4.2 [INFO] [stderr] Compiling syn v1.0.17 [INFO] [stderr] Checking either v1.5.3 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Checking ppv-lite86 v0.2.6 [INFO] [stderr] Checking ascii v1.0.0 [INFO] [stderr] Checking remove_dir_all v0.5.2 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Checking matrixmultiply v0.2.3 [INFO] [stderr] Checking lock_api v0.3.4 [INFO] [stderr] Checking itertools v0.8.2 [INFO] [stderr] Compiling proc-macro2 v1.0.10 [INFO] [stderr] Compiling aho-corasick v0.7.10 [INFO] [stderr] Compiling proc-macro-hack v0.4.2 [INFO] [stderr] Compiling mashup-impl v0.1.9 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Checking parking_lot_core v0.7.1 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Checking hdf5-types v0.6.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Checking parking_lot v0.10.2 [INFO] [stderr] Checking mashup v0.1.9 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking rand_pcg v0.2.1 [INFO] [stderr] Checking tempdir v0.3.7 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Checking ndarray v0.13.0 [INFO] [stderr] Checking regex v1.3.6 [INFO] [stderr] Compiling hdf5-sys v0.6.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-90f7409fef6938a9/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55e6a46de54f - std::backtrace_rs::backtrace::libunwind::trace::h8864605b5c3dbe2c [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/../backtrace/src/backtrace/libunwind.rs:96 [INFO] [stderr] 1: 0x55e6a46de54f - std::backtrace_rs::backtrace::trace_unsynchronized::h1f622efed412f077 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/../backtrace/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55e6a46de54f - std::sys_common::backtrace::_print_fmt::h8e17da323f21cc2b [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/sys_common/backtrace.rs:77 [INFO] [stderr] 3: 0x55e6a46de54f - ::fmt::hd4a7293426badf40 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/sys_common/backtrace.rs:58 [INFO] [stderr] 4: 0x55e6a46fddec - core::fmt::write::hfbd2baad61ed21a8 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libcore/fmt/mod.rs:1117 [INFO] [stderr] 5: 0x55e6a46db252 - std::io::Write::write_fmt::h54828fb1bd41a052 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/io/mod.rs:1508 [INFO] [stderr] 6: 0x55e6a46e0b30 - std::sys_common::backtrace::_print::h6ba0300926b9fb58 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/sys_common/backtrace.rs:61 [INFO] [stderr] 7: 0x55e6a46e0b30 - std::sys_common::backtrace::print::hd11f0188385cb859 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/sys_common/backtrace.rs:48 [INFO] [stderr] 8: 0x55e6a46e0b30 - std::panicking::default_hook::{{closure}}::h57b45fcdc30fe8e4 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x55e6a46e087c - std::panicking::default_hook::h067cd795bad37ff3 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/panicking.rs:217 [INFO] [stderr] 10: 0x55e6a46e1173 - std::panicking::rust_panic_with_hook::hd1b93581b69959be [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/panicking.rs:526 [INFO] [stderr] 11: 0x55e6a44e4f29 - std::panicking::begin_panic::h32292364eb80bf8e [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/panicking.rs:456 [INFO] [stderr] 12: 0x55e6a44b53ec - build_script_build::LibrarySearcher::try_locate_hdf5_library::h26c2249f5cd6d262 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523 [INFO] [stderr] 13: 0x55e6a44b679c - build_script_build::main::h8aa449418a2dc3dd [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:601 [INFO] [stderr] 14: 0x55e6a44c0dfb - std::rt::lang_start::{{closure}}::h2995af971a1e8723 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x55e6a46e1543 - std::rt::lang_start_internal::{{closure}}::h9a7ec4d0a4846786 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x55e6a46e1543 - std::panicking::try::do_call::h31d9073533c95062 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/panicking.rs:348 [INFO] [stderr] 17: 0x55e6a46e1543 - std::panicking::try::h9be90170880ba1d0 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/panicking.rs:325 [INFO] [stderr] 18: 0x55e6a46e1543 - std::panic::catch_unwind::hba3ee29aa4d47586 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x55e6a46e1543 - std::rt::lang_start_internal::h90880417661a7eb6 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x55e6a44c0dd7 - std::rt::lang_start::h30187425af0275f7 [INFO] [stderr] at /rustc/22dd2dd1dc07f63ae9394352d412f020d2985684/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x55e6a44b724a - main [INFO] [stderr] 22: 0x7fe4275b20b3 - __libc_start_main [INFO] [stderr] 23: 0x55e6a44b10be - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "1a25dacff8f4738dae7d062a0f92467f7b0ca34490b3387ac99f2a4689292c2c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1a25dacff8f4738dae7d062a0f92467f7b0ca34490b3387ac99f2a4689292c2c", kill_on_drop: false }` [INFO] [stdout] 1a25dacff8f4738dae7d062a0f92467f7b0ca34490b3387ac99f2a4689292c2c