[INFO] crate hdf5-rs 0.2.0 is already in cache [INFO] checking hdf5-rs-0.2.0 against master#e22b61bff0bdd08be7665607cb7be3748c8a35d2 for pr-74627 [INFO] extracting crate hdf5-rs 0.2.0 into /workspace/builds/worker-13/source [INFO] validating manifest of crates.io crate hdf5-rs 0.2.0 on toolchain e22b61bff0bdd08be7665607cb7be3748c8a35d2 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+e22b61bff0bdd08be7665607cb7be3748c8a35d2" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-sys from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency remutex from crates.io crate hdf5-rs 0.2.0 [INFO] removed path dependency libhdf5-lib from crates.io crate hdf5-rs 0.2.0 [INFO] finished tweaking crates.io crate hdf5-rs 0.2.0 [INFO] tweaked toml for crates.io crate hdf5-rs 0.2.0 written to /workspace/builds/worker-13/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+e22b61bff0bdd08be7665607cb7be3748c8a35d2" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+e22b61bff0bdd08be7665607cb7be3748c8a35d2" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+e22b61bff0bdd08be7665607cb7be3748c8a35d2" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 529cce4b9bfd71f5aed0228b87ae70ea6952760290552cea4f2faec3c03b7f61 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "529cce4b9bfd71f5aed0228b87ae70ea6952760290552cea4f2faec3c03b7f61", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "529cce4b9bfd71f5aed0228b87ae70ea6952760290552cea4f2faec3c03b7f61", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "529cce4b9bfd71f5aed0228b87ae70ea6952760290552cea4f2faec3c03b7f61", kill_on_drop: false }` [INFO] [stdout] 529cce4b9bfd71f5aed0228b87ae70ea6952760290552cea4f2faec3c03b7f61 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+e22b61bff0bdd08be7665607cb7be3748c8a35d2" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b64cd756dacad79d579772752818723ced269ff901fd858ff906e16fe00eb804 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b64cd756dacad79d579772752818723ced269ff901fd858ff906e16fe00eb804", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.73 [INFO] [stderr] Compiling autocfg v1.0.0 [INFO] [stderr] Compiling winapi-build v0.1.1 [INFO] [stderr] Checking winapi v0.2.8 [INFO] [stderr] Checking utf8-ranges v0.1.3 [INFO] [stderr] Checking regex-syntax v0.3.9 [INFO] [stderr] Compiling libhdf5-lib v0.2.0 [INFO] [stderr] Compiling kernel32-sys v0.2.2 [INFO] [stderr] Compiling num-traits v0.2.12 [INFO] [stderr] Compiling num-integer v0.1.43 [INFO] [stderr] Compiling num-iter v0.1.41 [INFO] [stderr] Checking remutex v0.1.1 [INFO] [stderr] Checking memchr v0.1.11 [INFO] [stderr] Checking thread-id v2.0.0 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Checking thread_local v0.2.7 [INFO] [stderr] Checking aho-corasick v0.5.3 [INFO] [stderr] Compiling libhdf5-sys v0.2.0 [INFO] [stderr] Compiling hdf5-rs v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/libhdf5-sys-ea0b738eae9c658c/build_script_build-ea0b738eae9c658c.build_script_build.9zbyv1lb-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ea0b738eae9c658c/build_script_build-ea0b738eae9c658c.build_script_build.9zbyv1lb-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ea0b738eae9c658c/build_script_build-ea0b738eae9c658c.build_script_build.9zbyv1lb-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ea0b738eae9c658c/build_script_build-ea0b738eae9c658c.build_script_build.9zbyv1lb-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/libhdf5-sys-ea0b738eae9c658c/build_script_build-ea0b738eae9c658c.build_script_build.9zbyv1lb-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/libhdf5-sys-ea0b738eae9c658c/build_script_build-ea0b738eae9c658c" "/opt/rustwide/target/debug/build/libhdf5-sys-ea0b738eae9c658c/build_script_build-ea0b738eae9c658c.drb1gy1ucto1y9z.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-bf60fccb3e62153f.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-d895ec1521a352e3.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-5333207f7fdaff57.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-5e065c4933df0dc9.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-2ac35a6dd1bd3596.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-b8b9f86383e2e879.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-8c1a87013a4e685b.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-96bdb8ea34325807.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-cf3b83848867fae8.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-e4d1f8701b1db897.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-9c83a198016cea8e.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-2235987a16fa51d0.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-7958ad441e827235.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-df9a2255aa3aefd0.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-ef3396f5290b8f93.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-80bd8cd3dfc96137.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-cd104942fda86acc.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-e6ba59dfb364610e.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `libhdf5-sys`. [INFO] [stderr] [INFO] [stderr] To learn more, run the command again with --verbose. [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stdout] error: linking with `cc` failed: exit code: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-Wl,--as-needed" "-Wl,-z,noexecstack" "-m64" "-Wl,--eh-frame-hdr" "-L" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib" "/opt/rustwide/target/debug/build/hdf5-rs-17085e7f3f481832/build_script_build-17085e7f3f481832.build_script_build.bph8ly0r-cgu.0.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-17085e7f3f481832/build_script_build-17085e7f3f481832.build_script_build.bph8ly0r-cgu.1.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-17085e7f3f481832/build_script_build-17085e7f3f481832.build_script_build.bph8ly0r-cgu.2.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-17085e7f3f481832/build_script_build-17085e7f3f481832.build_script_build.bph8ly0r-cgu.3.rcgu.o" "/opt/rustwide/target/debug/build/hdf5-rs-17085e7f3f481832/build_script_build-17085e7f3f481832.build_script_build.bph8ly0r-cgu.4.rcgu.o" "-o" "/opt/rustwide/target/debug/build/hdf5-rs-17085e7f3f481832/build_script_build-17085e7f3f481832" "/opt/rustwide/target/debug/build/hdf5-rs-17085e7f3f481832/build_script_build-17085e7f3f481832.2035b2194bh3ybgi.rcgu.o" "-Wl,--gc-sections" "-pie" "-Wl,-zrelro" "-Wl,-znow" "-nodefaultlibs" "-L" "/opt/rustwide/target/debug/deps" "-L" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/liblibhdf5_lib-bf60fccb3e62153f.rlib" "-Wl,--start-group" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libstd-d895ec1521a352e3.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libpanic_unwind-5333207f7fdaff57.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libminiz_oxide-5e065c4933df0dc9.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libadler-2ac35a6dd1bd3596.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libobject-b8b9f86383e2e879.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libaddr2line-8c1a87013a4e685b.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libgimli-96bdb8ea34325807.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_demangle-cf3b83848867fae8.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libhashbrown-e4d1f8701b1db897.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_alloc-9c83a198016cea8e.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libunwind-2235987a16fa51d0.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcfg_if-7958ad441e827235.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/liblibc-df9a2255aa3aefd0.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/liballoc-ef3396f5290b8f93.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/librustc_std_workspace_core-80bd8cd3dfc96137.rlib" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcore-cd104942fda86acc.rlib" "-Wl,--end-group" "/opt/rustwide/rustup-home/toolchains/e22b61bff0bdd08be7665607cb7be3748c8a35d2/lib/rustlib/x86_64-unknown-linux-gnu/lib/libcompiler_builtins-e6ba59dfb364610e.rlib" "-Wl,-Bdynamic" "-lhdf5" "-ldl" "-lrt" "-lpthread" "-lgcc_s" "-lc" "-lm" "-lrt" "-lpthread" "-lutil" "-ldl" "-lutil" [INFO] [stdout] = note: /usr/bin/ld: cannot find -lhdf5 [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to previous error [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "b64cd756dacad79d579772752818723ced269ff901fd858ff906e16fe00eb804", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b64cd756dacad79d579772752818723ced269ff901fd858ff906e16fe00eb804", kill_on_drop: false }` [INFO] [stdout] b64cd756dacad79d579772752818723ced269ff901fd858ff906e16fe00eb804