[INFO] crate hdf5-sys 0.6.1 is already in cache [INFO] testing hdf5-sys-0.6.1 against try#03a1ea71b075ab964b5278bc6e74cd6c52c36ee0 for pr-74409 [INFO] extracting crate hdf5-sys 0.6.1 into /workspace/builds/worker-5/source [INFO] validating manifest of crates.io crate hdf5-sys 0.6.1 on toolchain 03a1ea71b075ab964b5278bc6e74cd6c52c36ee0 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+03a1ea71b075ab964b5278bc6e74cd6c52c36ee0" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-sys 0.6.1 [INFO] finished tweaking crates.io crate hdf5-sys 0.6.1 [INFO] tweaked toml for crates.io crate hdf5-sys 0.6.1 written to /workspace/builds/worker-5/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+03a1ea71b075ab964b5278bc6e74cd6c52c36ee0" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+03a1ea71b075ab964b5278bc6e74cd6c52c36ee0" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+03a1ea71b075ab964b5278bc6e74cd6c52c36ee0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] b57c79cf93013c55e6f9e3f978ac713b5b6eae9715f0f51738ac3ef5e5cf4ae7 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b57c79cf93013c55e6f9e3f978ac713b5b6eae9715f0f51738ac3ef5e5cf4ae7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b57c79cf93013c55e6f9e3f978ac713b5b6eae9715f0f51738ac3ef5e5cf4ae7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b57c79cf93013c55e6f9e3f978ac713b5b6eae9715f0f51738ac3ef5e5cf4ae7", kill_on_drop: false }` [INFO] [stdout] b57c79cf93013c55e6f9e3f978ac713b5b6eae9715f0f51738ac3ef5e5cf4ae7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+03a1ea71b075ab964b5278bc6e74cd6c52c36ee0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 8a67a787c24e838af7e7263a439938d557a6f2ede974b3bd1a00dbe56984171b [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8a67a787c24e838af7e7263a439938d557a6f2ede974b3bd1a00dbe56984171b", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling libloading v0.6.2 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling hdf5-sys v0.6.1 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-620b90218c0be02c/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_NO_PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=HDF5_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_STATIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_ALL_DYNAMIC [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_PATH [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_LIBDIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64-unknown-linux-gnu [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR_x86_64_unknown_linux_gnu [INFO] [stderr] cargo:rerun-if-env-changed=HOST_PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] cargo:rerun-if-env-changed=PKG_CONFIG_SYSROOT_DIR [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x556d2537be35 - backtrace::backtrace::libunwind::trace::hea89dfbbfe67f40d [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x556d2537be35 - backtrace::backtrace::trace_unsynchronized::h0513dd713d7644d4 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x556d2537be35 - std::sys_common::backtrace::_print_fmt::h040abae64e4a24a9 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x556d2537be35 - ::fmt::hb4bdb37c3c335733 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x556d2539f81c - core::fmt::write::h540ac4a6a1232abc [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x556d25378b52 - std::io::Write::write_fmt::h5ffa1b5a7703af47 [INFO] [stderr] at src/libstd/io/mod.rs:1539 [INFO] [stderr] 6: 0x556d2537e350 - std::sys_common::backtrace::_print::hb55cc635eaf1882e [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x556d2537e350 - std::sys_common::backtrace::print::h2b2218fa55714084 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x556d2537e350 - std::panicking::default_hook::{{closure}}::h578517c025765cf3 [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x556d2537e09c - std::panicking::default_hook::h4cafc94c2fc640fb [INFO] [stderr] at src/libstd/panicking.rs:217 [INFO] [stderr] 10: 0x556d2537e993 - std::panicking::rust_panic_with_hook::h3eeb5001beeca5c3 [INFO] [stderr] at src/libstd/panicking.rs:526 [INFO] [stderr] 11: 0x556d252d73a9 - std::panicking::begin_panic::ha636c453c31a3d7e [INFO] [stderr] at /rustc/03a1ea71b075ab964b5278bc6e74cd6c52c36ee0/src/libstd/panicking.rs:456 [INFO] [stderr] 12: 0x556d2515f4cc - build_script_build::LibrarySearcher::try_locate_hdf5_library::h3fd9d200423e6aa3 [INFO] [stderr] at /opt/rustwide/workdir/build.rs:523 [INFO] [stderr] 13: 0x556d2516087c - build_script_build::main::hd8b1ffe95d76d5ac [INFO] [stderr] at /opt/rustwide/workdir/build.rs:601 [INFO] [stderr] 14: 0x556d2516b1ab - std::rt::lang_start::{{closure}}::h14450f035ce129e2 [INFO] [stderr] at /rustc/03a1ea71b075ab964b5278bc6e74cd6c52c36ee0/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x556d2537ed63 - std::rt::lang_start_internal::{{closure}}::h155f3093add35bce [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x556d2537ed63 - std::panicking::try::do_call::h45f1f66ee6b987d6 [INFO] [stderr] at src/libstd/panicking.rs:348 [INFO] [stderr] 17: 0x556d2537ed63 - std::panicking::try::h0924dfb942cef7e3 [INFO] [stderr] at src/libstd/panicking.rs:325 [INFO] [stderr] 18: 0x556d2537ed63 - std::panic::catch_unwind::h883180846c5b53fa [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x556d2537ed63 - std::rt::lang_start_internal::he9284d43a52786c5 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x556d2516b187 - std::rt::lang_start::habdb2afef16b7f5f [INFO] [stderr] at /rustc/03a1ea71b075ab964b5278bc6e74cd6c52c36ee0/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x556d2516132a - main [INFO] [stderr] 22: 0x7f6b6b1e40b3 - __libc_start_main [INFO] [stderr] 23: 0x556d2515b19e - _start [INFO] [stderr] 24: 0x0 - [INFO] running `Command { std: "docker" "inspect" "8a67a787c24e838af7e7263a439938d557a6f2ede974b3bd1a00dbe56984171b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8a67a787c24e838af7e7263a439938d557a6f2ede974b3bd1a00dbe56984171b", kill_on_drop: false }` [INFO] [stdout] 8a67a787c24e838af7e7263a439938d557a6f2ede974b3bd1a00dbe56984171b