[INFO] crate rumi 0.2.1 is already in cache [INFO] testing rumi-0.2.1 against master#8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e for pr-74409 [INFO] extracting crate rumi 0.2.1 into /workspace/builds/worker-3/source [INFO] validating manifest of crates.io crate rumi 0.2.1 on toolchain 8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate rumi 0.2.1 [INFO] finished tweaking crates.io crate rumi 0.2.1 [INFO] tweaked toml for crates.io crate rumi 0.2.1 written to /workspace/builds/worker-3/source/Cargo.toml [INFO] crate crates.io crate rumi 0.2.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 036da074a874bdebbafaf1b8b227b6912090bf5eea185e20e1d75fe00e2029c4 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "036da074a874bdebbafaf1b8b227b6912090bf5eea185e20e1d75fe00e2029c4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "036da074a874bdebbafaf1b8b227b6912090bf5eea185e20e1d75fe00e2029c4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "036da074a874bdebbafaf1b8b227b6912090bf5eea185e20e1d75fe00e2029c4", kill_on_drop: false }` [INFO] [stdout] 036da074a874bdebbafaf1b8b227b6912090bf5eea185e20e1d75fe00e2029c4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6da864f5f6cee2abf770d523cf8a19aaca6d1f14d2751c690efc5c0ac9cd49b1 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "6da864f5f6cee2abf770d523cf8a19aaca6d1f14d2751c690efc5c0ac9cd49b1", kill_on_drop: false }` [INFO] [stderr] Compiling cc v1.0.37 [INFO] [stderr] Compiling libc v0.2.65 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling memchr v2.2.1 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling pkg-config v0.3.14 [INFO] [stderr] Compiling quick-error v1.2.2 [INFO] [stderr] Compiling glob v0.2.11 [INFO] [stderr] Compiling version_check v0.1.5 [INFO] [stderr] Compiling syn v0.15.39 [INFO] [stderr] Compiling regex-syntax v0.6.12 [INFO] [stderr] Compiling log v0.4.7 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling proc-macro2 v1.0.6 [INFO] [stderr] Compiling byteorder v1.3.2 [INFO] [stderr] Compiling arrayvec v0.4.11 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling nodrop v0.1.13 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling termcolor v1.0.5 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling smallvec v0.6.10 [INFO] [stderr] Compiling scopeguard v1.0.0 [INFO] [stderr] Compiling serde v1.0.97 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling doc-comment v0.3.1 [INFO] [stderr] Compiling matches v0.1.8 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling rustc-demangle v0.1.16 [INFO] [stderr] Compiling rayon-core v1.5.0 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling basebits v1.2.0 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling fs-utils v1.1.1 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling crossbeam-utils v0.6.6 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling unicode-bidi v0.3.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling unicode-normalization v0.1.8 [INFO] [stderr] Compiling itertools v0.8.0 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling crossbeam-queue v0.1.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.7.6 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling rustc-hash v1.0.1 [INFO] [stderr] Compiling atty v0.2.13 [INFO] [stderr] Compiling which v3.1.0 [INFO] [stderr] Compiling num_cpus v1.10.1 [INFO] [stderr] Compiling clap v2.33.0 [INFO] [stderr] Compiling memoffset v0.5.1 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling backtrace-sys v0.1.32 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling regex v1.3.1 [INFO] [stderr] Compiling crossbeam-epoch v0.7.2 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling crossbeam-deque v0.6.3 [INFO] [stderr] Compiling backtrace v0.3.40 [INFO] [stderr] Compiling url v2.1.0 [INFO] [stderr] Compiling rayon v1.1.0 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling serde_derive v1.0.97 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling rust-htslib v0.26.0 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling rumi v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 1m 22s [INFO] running `Command { std: "docker" "inspect" "6da864f5f6cee2abf770d523cf8a19aaca6d1f14d2751c690efc5c0ac9cd49b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6da864f5f6cee2abf770d523cf8a19aaca6d1f14d2751c690efc5c0ac9cd49b1", kill_on_drop: false }` [INFO] [stdout] 6da864f5f6cee2abf770d523cf8a19aaca6d1f14d2751c690efc5c0ac9cd49b1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9bb33b7ffb6df4c0d57fbc67bba5bd42debae958c9cf09be5ffd32916642eaa9 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "9bb33b7ffb6df4c0d57fbc67bba5bd42debae958c9cf09be5ffd32916642eaa9", kill_on_drop: false }` [INFO] [stderr] Compiling rumi v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 2.02s [INFO] running `Command { std: "docker" "inspect" "9bb33b7ffb6df4c0d57fbc67bba5bd42debae958c9cf09be5ffd32916642eaa9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9bb33b7ffb6df4c0d57fbc67bba5bd42debae958c9cf09be5ffd32916642eaa9", kill_on_drop: false }` [INFO] [stdout] 9bb33b7ffb6df4c0d57fbc67bba5bd42debae958c9cf09be5ffd32916642eaa9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 9daba57e6258a9711727ee07f415892221de40e1410bde202447c62f86919c99 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "9daba57e6258a9711727ee07f415892221de40e1410bde202447c62f86919c99", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rumi_lib-c33ffca6d6f9f4e6 [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test test::test_graph_small ... ok [INFO] [stdout] test test::test_graph_umi ... ok [INFO] [stdout] test test::test_determine_umi ... ok [INFO] [stdout] test test::test_group_reads_complex ... ok [INFO] [stdout] test test::test_read_groups_cigars ... ok [INFO] [stdout] test test::test_read_groups_umi_tools ... ok [INFO] [stderr] Running /opt/rustwide/target/debug/deps/rumi-94484af9093a42f2 [INFO] [stdout] test test::test_group_reads_small ... ok [INFO] [stderr] Doc-tests rumi_lib [INFO] [stdout] [INFO] [stdout] test result: ok. 7 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "9daba57e6258a9711727ee07f415892221de40e1410bde202447c62f86919c99", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9daba57e6258a9711727ee07f415892221de40e1410bde202447c62f86919c99", kill_on_drop: false }` [INFO] [stdout] 9daba57e6258a9711727ee07f415892221de40e1410bde202447c62f86919c99