[INFO] crate neuro 0.1.0 is already in cache [INFO] testing neuro-0.1.0 against master#8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e for pr-74409 [INFO] extracting crate neuro 0.1.0 into /workspace/builds/worker-10/source [INFO] validating manifest of crates.io crate neuro 0.1.0 on toolchain 8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate neuro 0.1.0 [INFO] finished tweaking crates.io crate neuro 0.1.0 [INFO] tweaked toml for crates.io crate neuro 0.1.0 written to /workspace/builds/worker-10/source/Cargo.toml [INFO] crate crates.io crate neuro 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] b3248921a7d280696fd44fa61b5c2bc1fd099a328e5ccdd32e48c9cc4a6282df [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "b3248921a7d280696fd44fa61b5c2bc1fd099a328e5ccdd32e48c9cc4a6282df", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b3248921a7d280696fd44fa61b5c2bc1fd099a328e5ccdd32e48c9cc4a6282df", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b3248921a7d280696fd44fa61b5c2bc1fd099a328e5ccdd32e48c9cc4a6282df", kill_on_drop: false }` [INFO] [stdout] b3248921a7d280696fd44fa61b5c2bc1fd099a328e5ccdd32e48c9cc4a6282df [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-10/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e2a7b352911844e8409a1135b1d46cf6b6e819e1ab0485feb8074156be4fb24f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e2a7b352911844e8409a1135b1d46cf6b6e819e1ab0485feb8074156be4fb24f", kill_on_drop: false }` [INFO] [stderr] Compiling ryu v1.0.2 [INFO] [stderr] Compiling syn v1.0.16 [INFO] [stderr] Compiling itoa v0.4.5 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling ppv-lite86 v0.2.6 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling lzw v0.10.0 [INFO] [stderr] Compiling color_quant v1.0.1 [INFO] [stderr] Compiling ascii v0.9.3 [INFO] [stderr] Compiling number_prefix v0.3.0 [INFO] [stderr] Compiling scoped_threadpool v0.1.9 [INFO] [stderr] Compiling bytemuck v1.2.0 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling num-bigint v0.2.6 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-iter v0.1.40 [INFO] [stderr] Compiling num-rational v0.2.3 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling lock_api v0.2.0 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling inflate v0.4.5 [INFO] [stderr] Compiling walkdir v2.3.1 [INFO] [stderr] Compiling gif v0.10.3 [INFO] [stderr] Compiling proc-macro2 v1.0.9 [INFO] [stderr] Compiling crc32fast v1.2.0 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling clicolors-control v1.0.1 [INFO] [stderr] Compiling termios v0.3.1 [INFO] [stderr] Compiling deflate v0.7.20 [INFO] [stderr] Compiling regex-automata v0.1.8 [INFO] [stderr] Compiling tiff v0.4.0 [INFO] [stderr] Compiling hdf5-types v0.6.0 [INFO] [stderr] Compiling parking_lot_core v0.5.0 [INFO] [stderr] Compiling parking_lot v0.8.0 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling crossbeam-queue v0.2.1 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling c2-chacha v0.2.3 [INFO] [stderr] Compiling regex v1.3.4 [INFO] [stderr] Compiling png v0.15.3 [INFO] [stderr] Compiling bstr v0.2.11 [INFO] [stderr] Compiling serde_json v1.0.48 [INFO] [stderr] Compiling quote v1.0.2 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling console v0.9.2 [INFO] [stderr] Compiling rayon v1.3.0 [INFO] [stderr] Compiling indicatif v0.14.0 [INFO] [stderr] Compiling hdf5-sys v0.6.0 [INFO] [stderr] Compiling num v0.2.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.0` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-f2331432def78570/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x555e63f85a65 - backtrace::backtrace::libunwind::trace::hea89dfbbfe67f40d [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x555e63f85a65 - backtrace::backtrace::trace_unsynchronized::h0513dd713d7644d4 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x555e63f85a65 - std::sys_common::backtrace::_print_fmt::h040abae64e4a24a9 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x555e63f85a65 - ::fmt::hb4bdb37c3c335733 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x555e63fa93ec - core::fmt::write::h540ac4a6a1232abc [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x555e63f82782 - std::io::Write::write_fmt::h5ffa1b5a7703af47 [INFO] [stderr] at src/libstd/io/mod.rs:1539 [INFO] [stderr] 6: 0x555e63f87f80 - std::sys_common::backtrace::_print::hb55cc635eaf1882e [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x555e63f87f80 - std::sys_common::backtrace::print::h2b2218fa55714084 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x555e63f87f80 - std::panicking::default_hook::{{closure}}::h578517c025765cf3 [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x555e63f87ccc - std::panicking::default_hook::h4cafc94c2fc640fb [INFO] [stderr] at src/libstd/panicking.rs:217 [INFO] [stderr] 10: 0x555e63f885c3 - std::panicking::rust_panic_with_hook::h3eeb5001beeca5c3 [INFO] [stderr] at src/libstd/panicking.rs:526 [INFO] [stderr] 11: 0x555e63d96cf9 - std::panicking::begin_panic::he2086bc94359bf3a [INFO] [stderr] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panicking.rs:456 [INFO] [stderr] 12: 0x555e63d674fc - build_script_build::LibrarySearcher::try_locate_hdf5_library::hb3f783bb4538e779 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:527 [INFO] [stderr] 13: 0x555e63d688ac - build_script_build::main::h0fa6fe23743a4247 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.0/build.rs:605 [INFO] [stderr] 14: 0x555e63d6e25b - std::rt::lang_start::{{closure}}::hcc140c8430166a84 [INFO] [stderr] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x555e63f88993 - std::rt::lang_start_internal::{{closure}}::h155f3093add35bce [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x555e63f88993 - std::panicking::try::do_call::h45f1f66ee6b987d6 [INFO] [stderr] at src/libstd/panicking.rs:348 [INFO] [stderr] 17: 0x555e63f88993 - std::panicking::try::h0924dfb942cef7e3 [INFO] [stderr] at src/libstd/panicking.rs:325 [INFO] [stderr] 18: 0x555e63f88993 - std::panic::catch_unwind::h883180846c5b53fa [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x555e63f88993 - std::rt::lang_start_internal::he9284d43a52786c5 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x555e63d6e237 - std::rt::lang_start::hb22101ecea0dd9ab [INFO] [stderr] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x555e63d693da - main [INFO] [stderr] 22: 0x7f5a399630b3 - __libc_start_main [INFO] [stderr] 23: 0x555e63d631ae - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "e2a7b352911844e8409a1135b1d46cf6b6e819e1ab0485feb8074156be4fb24f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e2a7b352911844e8409a1135b1d46cf6b6e819e1ab0485feb8074156be4fb24f", kill_on_drop: false }` [INFO] [stdout] e2a7b352911844e8409a1135b1d46cf6b6e819e1ab0485feb8074156be4fb24f