[INFO] crate hdf5 0.6.1 is already in cache [INFO] testing hdf5-0.6.1 against master#8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e for pr-74409 [INFO] extracting crate hdf5 0.6.1 into /workspace/builds/worker-1/source [INFO] validating manifest of crates.io crate hdf5 0.6.1 on toolchain 8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5 0.6.1 [INFO] finished tweaking crates.io crate hdf5 0.6.1 [INFO] tweaked toml for crates.io crate hdf5 0.6.1 written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate crates.io crate hdf5 0.6.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8663084c5646a88cd2d57fe9e9adf632033eb6893aed6a4ed11a3141ecb4aed8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "8663084c5646a88cd2d57fe9e9adf632033eb6893aed6a4ed11a3141ecb4aed8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8663084c5646a88cd2d57fe9e9adf632033eb6893aed6a4ed11a3141ecb4aed8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8663084c5646a88cd2d57fe9e9adf632033eb6893aed6a4ed11a3141ecb4aed8", kill_on_drop: false }` [INFO] [stdout] 8663084c5646a88cd2d57fe9e9adf632033eb6893aed6a4ed11a3141ecb4aed8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e64653484b5033f994b29935deb14ff96681bfebe71606c3d5b68b0d102ef690 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "e64653484b5033f994b29935deb14ff96681bfebe71606c3d5b68b0d102ef690", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.68 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling libloading v0.6.0 [INFO] [stderr] Compiling regex-syntax v0.6.17 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Compiling proc-macro2 v1.0.10 [INFO] [stderr] Compiling unicode-xid v0.2.0 [INFO] [stderr] Compiling syn v1.0.17 [INFO] [stderr] Compiling ndarray v0.13.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling smallvec v1.3.0 [INFO] [stderr] Compiling ascii v1.0.0 [INFO] [stderr] Compiling num-traits v0.2.11 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling num-integer v0.1.42 [INFO] [stderr] Compiling matrixmultiply v0.2.3 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling lock_api v0.3.4 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling aho-corasick v0.7.10 [INFO] [stderr] Compiling quote v1.0.3 [INFO] [stderr] Compiling parking_lot_core v0.7.1 [INFO] [stderr] Compiling hdf5-types v0.6.1 [INFO] [stderr] Compiling parking_lot v0.10.2 [INFO] [stderr] Compiling regex v1.3.6 [INFO] [stderr] Compiling hdf5-sys v0.6.1 [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-90f7409fef6938a9/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55f2e4c872e5 - backtrace::backtrace::libunwind::trace::hea89dfbbfe67f40d [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x55f2e4c872e5 - backtrace::backtrace::trace_unsynchronized::h0513dd713d7644d4 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55f2e4c872e5 - std::sys_common::backtrace::_print_fmt::h040abae64e4a24a9 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x55f2e4c872e5 - ::fmt::hb4bdb37c3c335733 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x55f2e4caaccc - core::fmt::write::h540ac4a6a1232abc [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x55f2e4c84002 - std::io::Write::write_fmt::h5ffa1b5a7703af47 [INFO] [stderr] at src/libstd/io/mod.rs:1539 [INFO] [stderr] 6: 0x55f2e4c89800 - std::sys_common::backtrace::_print::hb55cc635eaf1882e [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x55f2e4c89800 - std::sys_common::backtrace::print::h2b2218fa55714084 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x55f2e4c89800 - std::panicking::default_hook::{{closure}}::h578517c025765cf3 [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x55f2e4c8954c - std::panicking::default_hook::h4cafc94c2fc640fb [INFO] [stderr] at src/libstd/panicking.rs:217 [INFO] [stderr] 10: 0x55f2e4c89e43 - std::panicking::rust_panic_with_hook::h3eeb5001beeca5c3 [INFO] [stderr] at src/libstd/panicking.rs:526 [INFO] [stderr] 11: 0x55f2e4a9a2c9 - std::panicking::begin_panic::he2086bc94359bf3a [INFO] [stderr] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panicking.rs:456 [INFO] [stderr] 12: 0x55f2e4a6a4cc - build_script_build::LibrarySearcher::try_locate_hdf5_library::h26c2249f5cd6d262 [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:523 [INFO] [stderr] 13: 0x55f2e4a6b87c - build_script_build::main::h8aa449418a2dc3dd [INFO] [stderr] at /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/hdf5-sys-0.6.1/build.rs:601 [INFO] [stderr] 14: 0x55f2e4a761ab - std::rt::lang_start::{{closure}}::h5ed70484d4a8ffbf [INFO] [stderr] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x55f2e4c8a213 - std::rt::lang_start_internal::{{closure}}::h155f3093add35bce [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x55f2e4c8a213 - std::panicking::try::do_call::h45f1f66ee6b987d6 [INFO] [stderr] at src/libstd/panicking.rs:348 [INFO] [stderr] 17: 0x55f2e4c8a213 - std::panicking::try::h0924dfb942cef7e3 [INFO] [stderr] at src/libstd/panicking.rs:325 [INFO] [stderr] 18: 0x55f2e4c8a213 - std::panic::catch_unwind::h883180846c5b53fa [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x55f2e4c8a213 - std::rt::lang_start_internal::he9284d43a52786c5 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x55f2e4a76187 - std::rt::lang_start::h6b46d700c0dd61da [INFO] [stderr] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x55f2e4a6c32a - main [INFO] [stderr] 22: 0x7fce849180b3 - __libc_start_main [INFO] [stderr] 23: 0x55f2e4a6619e - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: build failed [INFO] running `Command { std: "docker" "inspect" "e64653484b5033f994b29935deb14ff96681bfebe71606c3d5b68b0d102ef690", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e64653484b5033f994b29935deb14ff96681bfebe71606c3d5b68b0d102ef690", kill_on_drop: false }` [INFO] [stdout] e64653484b5033f994b29935deb14ff96681bfebe71606c3d5b68b0d102ef690