[INFO] crate checkm 0.0.1 is already in cache [INFO] testing checkm-0.0.1 against master#8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e for pr-74409 [INFO] extracting crate checkm 0.0.1 into /workspace/builds/worker-7/source [INFO] validating manifest of crates.io crate checkm 0.0.1 on toolchain 8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate checkm 0.0.1 [INFO] finished tweaking crates.io crate checkm 0.0.1 [INFO] tweaked toml for crates.io crate checkm 0.0.1 written to /workspace/builds/worker-7/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4eaa08051dd8b8467f87d9ddbdf2750e7d062348565777c22ed02d525ad058f8 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4eaa08051dd8b8467f87d9ddbdf2750e7d062348565777c22ed02d525ad058f8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4eaa08051dd8b8467f87d9ddbdf2750e7d062348565777c22ed02d525ad058f8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4eaa08051dd8b8467f87d9ddbdf2750e7d062348565777c22ed02d525ad058f8", kill_on_drop: false }` [INFO] [stdout] 4eaa08051dd8b8467f87d9ddbdf2750e7d062348565777c22ed02d525ad058f8 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9e0c40b348b51756412d5d5c79bab4cc809abf60be7d1ef1cc6e604319587497 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "9e0c40b348b51756412d5d5c79bab4cc809abf60be7d1ef1cc6e604319587497", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling byteorder v1.3.4 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling libc v0.2.73 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling termcolor v1.1.0 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Compiling bstr v0.2.13 [INFO] [stderr] Compiling csv v1.1.3 [INFO] [stderr] Compiling checkm v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 37.96s [INFO] running `Command { std: "docker" "inspect" "9e0c40b348b51756412d5d5c79bab4cc809abf60be7d1ef1cc6e604319587497", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9e0c40b348b51756412d5d5c79bab4cc809abf60be7d1ef1cc6e604319587497", kill_on_drop: false }` [INFO] [stdout] 9e0c40b348b51756412d5d5c79bab4cc809abf60be7d1ef1cc6e604319587497 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6aeda089c8b0918d31a9fe940d71ad5adb8073aae2262cc077790fa0de1ea73c [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "6aeda089c8b0918d31a9fe940d71ad5adb8073aae2262cc077790fa0de1ea73c", kill_on_drop: false }` [INFO] [stderr] Compiling checkm v0.0.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 3.81s [INFO] running `Command { std: "docker" "inspect" "6aeda089c8b0918d31a9fe940d71ad5adb8073aae2262cc077790fa0de1ea73c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6aeda089c8b0918d31a9fe940d71ad5adb8073aae2262cc077790fa0de1ea73c", kill_on_drop: false }` [INFO] [stdout] 6aeda089c8b0918d31a9fe940d71ad5adb8073aae2262cc077790fa0de1ea73c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] e9e9bfdc9b634c39458bbd5749fe7033826804ee9223625f2e45a529cb063d9b [INFO] running `Command { std: "docker" "start" "-a" "e9e9bfdc9b634c39458bbd5749fe7033826804ee9223625f2e45a529cb063d9b", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.38s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/checkm-0b8d6bb0a4108358 [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test test::test_retrieve ... ok [INFO] [stdout] test test::test_fasta_ordering_4times_min_completeness ... ok [INFO] [stdout] test test::test_ordering_4times ... ok [INFO] [stdout] test test::test_good_quality_genome_names ... ok [INFO] [stdout] test test::test_fasta_ordering_4times ... ok [INFO] [stderr] Doc-tests checkm [INFO] [stdout] test test::test_ordering_5times ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e9e9bfdc9b634c39458bbd5749fe7033826804ee9223625f2e45a529cb063d9b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e9e9bfdc9b634c39458bbd5749fe7033826804ee9223625f2e45a529cb063d9b", kill_on_drop: false }` [INFO] [stdout] e9e9bfdc9b634c39458bbd5749fe7033826804ee9223625f2e45a529cb063d9b