[INFO] cloning repository https://github.com/mttmartin/anneal_predictor [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/mttmartin/anneal_predictor" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmttmartin%2Fanneal_predictor", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmttmartin%2Fanneal_predictor'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8015bc6eaafedea32d296c1982070e2073c44112 [INFO] testing mttmartin/anneal_predictor against master#8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e for pr-74409 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmttmartin%2Fanneal_predictor" "/workspace/builds/worker-7/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/mttmartin/anneal_predictor on toolchain 8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/mttmartin/anneal_predictor [INFO] finished tweaking git repo https://github.com/mttmartin/anneal_predictor [INFO] tweaked toml for git repo https://github.com/mttmartin/anneal_predictor written to /workspace/builds/worker-7/source/Cargo.toml [INFO] crate git repo https://github.com/mttmartin/anneal_predictor already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 94ab446ded2c8ba4b3580fd9e5326d2c9071b887e76223b0a8b9469ec9609d2a [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "94ab446ded2c8ba4b3580fd9e5326d2c9071b887e76223b0a8b9469ec9609d2a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "94ab446ded2c8ba4b3580fd9e5326d2c9071b887e76223b0a8b9469ec9609d2a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "94ab446ded2c8ba4b3580fd9e5326d2c9071b887e76223b0a8b9469ec9609d2a", kill_on_drop: false }` [INFO] [stdout] 94ab446ded2c8ba4b3580fd9e5326d2c9071b887e76223b0a8b9469ec9609d2a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 986e923121dfdec09aca6860d14448dbf2624847b14a3bf97de9bf6ab836ba50 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "986e923121dfdec09aca6860d14448dbf2624847b14a3bf97de9bf6ab836ba50", kill_on_drop: false }` [INFO] [stderr] Compiling anneal_predictor v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:306:7 [INFO] [stdout] | [INFO] [stdout] 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `deltaG_dinucleotide` should have a snake case name [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `delta_g_dinucleotide` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaS` should have a snake case name [INFO] [stdout] --> src/main.rs:9:11 [INFO] [stdout] | [INFO] [stdout] 9 | let mut deltaS = 0.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaH` should have a snake case name [INFO] [stdout] --> src/main.rs:10:11 [INFO] [stdout] | [INFO] [stdout] 10 | let mut deltaH = 0.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:278:7 [INFO] [stdout] | [INFO] [stdout] 278 | let deltaG = deltaH - self.temperature * deltaS; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `initiation_termination_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:282:4 [INFO] [stdout] | [INFO] [stdout] 282 | fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `initiation_termination_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaH` should have a snake case name [INFO] [stdout] --> src/main.rs:284:7 [INFO] [stdout] | [INFO] [stdout] 284 | let deltaH = 9.62; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaS` should have a snake case name [INFO] [stdout] --> src/main.rs:285:7 [INFO] [stdout] | [INFO] [stdout] 285 | let deltaS = 17.15/1000.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaGinit` should have a snake case name [INFO] [stdout] --> src/main.rs:286:7 [INFO] [stdout] | [INFO] [stdout] 286 | let deltaGinit = deltaH - (self.temperature*deltaS); [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `delta_ginit` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaH` should have a snake case name [INFO] [stdout] --> src/main.rs:289:7 [INFO] [stdout] | [INFO] [stdout] 289 | let deltaH = 0.4184; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaS` should have a snake case name [INFO] [stdout] --> src/main.rs:290:7 [INFO] [stdout] | [INFO] [stdout] 290 | let deltaS = -11.72/1000.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaGinit` should have a snake case name [INFO] [stdout] --> src/main.rs:291:7 [INFO] [stdout] | [INFO] [stdout] 291 | let deltaGinit = deltaH - (self.temperature*deltaS); [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `delta_ginit` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `calc_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:299:4 [INFO] [stdout] | [INFO] [stdout] 299 | fn calc_deltaG(&self, template_piece: String) -> f64{ [INFO] [stdout] | ^^^^^^^^^^^ help: convert the identifier to snake case: `calc_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:300:10 [INFO] [stdout] | [INFO] [stdout] 300 | let mut deltaG = 0.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `initiation_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:303:11 [INFO] [stdout] | [INFO] [stdout] 303 | let mut initiation_deltaG = 0.0; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `initiation_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `dinucleotide_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:306:11 [INFO] [stdout] | [INFO] [stdout] 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `dinucleotide_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `lowest_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:320:5 [INFO] [stdout] | [INFO] [stdout] 320 | fn lowest_deltaG(&self) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `lowestDeltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:321:11 [INFO] [stdout] | [INFO] [stdout] 321 | let mut lowestDeltaG = 0.0; [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `currentDeltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:324:8 [INFO] [stdout] | [INFO] [stdout] 324 | let currentDeltaG = self.calc_deltaG(template_piece); [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case: `current_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `lowest_delta_G` should have a snake case name [INFO] [stdout] --> src/main.rs:339:6 [INFO] [stdout] | [INFO] [stdout] 339 | let lowest_delta_G = simulation.lowest_deltaG(); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 20 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 0.82s [INFO] running `Command { std: "docker" "inspect" "986e923121dfdec09aca6860d14448dbf2624847b14a3bf97de9bf6ab836ba50", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "986e923121dfdec09aca6860d14448dbf2624847b14a3bf97de9bf6ab836ba50", kill_on_drop: false }` [INFO] [stdout] 986e923121dfdec09aca6860d14448dbf2624847b14a3bf97de9bf6ab836ba50 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 9919aac0f7aadb837cf8cca84be0fa1410d13c5ed16ca5ef9476a5f70bde1f6b [INFO] running `Command { std: "docker" "start" "-a" "9919aac0f7aadb837cf8cca84be0fa1410d13c5ed16ca5ef9476a5f70bde1f6b", kill_on_drop: false }` [INFO] [stderr] Compiling anneal_predictor v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:306:7 [INFO] [stdout] | [INFO] [stdout] 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); [INFO] [stdout] | ----^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `deltaG_dinucleotide` should have a snake case name [INFO] [stdout] --> src/main.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `delta_g_dinucleotide` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaS` should have a snake case name [INFO] [stdout] --> src/main.rs:9:11 [INFO] [stdout] | [INFO] [stdout] 9 | let mut deltaS = 0.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaH` should have a snake case name [INFO] [stdout] --> src/main.rs:10:11 [INFO] [stdout] | [INFO] [stdout] 10 | let mut deltaH = 0.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:278:7 [INFO] [stdout] | [INFO] [stdout] 278 | let deltaG = deltaH - self.temperature * deltaS; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `initiation_termination_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:282:4 [INFO] [stdout] | [INFO] [stdout] 282 | fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `initiation_termination_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaH` should have a snake case name [INFO] [stdout] --> src/main.rs:284:7 [INFO] [stdout] | [INFO] [stdout] 284 | let deltaH = 9.62; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaS` should have a snake case name [INFO] [stdout] --> src/main.rs:285:7 [INFO] [stdout] | [INFO] [stdout] 285 | let deltaS = 17.15/1000.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaGinit` should have a snake case name [INFO] [stdout] --> src/main.rs:286:7 [INFO] [stdout] | [INFO] [stdout] 286 | let deltaGinit = deltaH - (self.temperature*deltaS); [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `delta_ginit` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaH` should have a snake case name [INFO] [stdout] --> src/main.rs:289:7 [INFO] [stdout] | [INFO] [stdout] 289 | let deltaH = 0.4184; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaS` should have a snake case name [INFO] [stdout] --> src/main.rs:290:7 [INFO] [stdout] | [INFO] [stdout] 290 | let deltaS = -11.72/1000.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaGinit` should have a snake case name [INFO] [stdout] --> src/main.rs:291:7 [INFO] [stdout] | [INFO] [stdout] 291 | let deltaGinit = deltaH - (self.temperature*deltaS); [INFO] [stdout] | ^^^^^^^^^^ help: convert the identifier to snake case: `delta_ginit` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `calc_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:299:4 [INFO] [stdout] | [INFO] [stdout] 299 | fn calc_deltaG(&self, template_piece: String) -> f64{ [INFO] [stdout] | ^^^^^^^^^^^ help: convert the identifier to snake case: `calc_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:300:10 [INFO] [stdout] | [INFO] [stdout] 300 | let mut deltaG = 0.0; [INFO] [stdout] | ^^^^^^ help: convert the identifier to snake case: `delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `initiation_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:303:11 [INFO] [stdout] | [INFO] [stdout] 303 | let mut initiation_deltaG = 0.0; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `initiation_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `dinucleotide_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:306:11 [INFO] [stdout] | [INFO] [stdout] 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `dinucleotide_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `lowest_deltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:320:5 [INFO] [stdout] | [INFO] [stdout] 320 | fn lowest_deltaG(&self) -> f64 { [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `lowestDeltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:321:11 [INFO] [stdout] | [INFO] [stdout] 321 | let mut lowestDeltaG = 0.0; [INFO] [stdout] | ^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `currentDeltaG` should have a snake case name [INFO] [stdout] --> src/main.rs:324:8 [INFO] [stdout] | [INFO] [stdout] 324 | let currentDeltaG = self.calc_deltaG(template_piece); [INFO] [stdout] | ^^^^^^^^^^^^^ help: convert the identifier to snake case: `current_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `lowest_delta_G` should have a snake case name [INFO] [stdout] --> src/main.rs:339:6 [INFO] [stdout] | [INFO] [stdout] 339 | let lowest_delta_G = simulation.lowest_deltaG(); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `lowest_delta_G` should have a snake case name [INFO] [stdout] --> src/main.rs:354:7 [INFO] [stdout] | [INFO] [stdout] 354 | let lowest_delta_G = simulation.lowest_deltaG(); [INFO] [stdout] | ^^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: 21 warnings emitted [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.82s [INFO] running `Command { std: "docker" "inspect" "9919aac0f7aadb837cf8cca84be0fa1410d13c5ed16ca5ef9476a5f70bde1f6b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9919aac0f7aadb837cf8cca84be0fa1410d13c5ed16ca5ef9476a5f70bde1f6b", kill_on_drop: false }` [INFO] [stdout] 9919aac0f7aadb837cf8cca84be0fa1410d13c5ed16ca5ef9476a5f70bde1f6b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] da531365ad3fe1b98b90b263a2d69f672608921b790fc5b13c9080f24e218581 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "da531365ad3fe1b98b90b263a2d69f672608921b790fc5b13c9080f24e218581", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/main.rs:306:7 [INFO] [stderr] | [INFO] [stderr] 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); [INFO] [stderr] | ----^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: method `deltaG_dinucleotide` should have a snake case name [INFO] [stderr] --> src/main.rs:8:5 [INFO] [stderr] | [INFO] [stderr] 8 | fn deltaG_dinucleotide(&self, substr1_initial: String, substr2_initial: String) -> f64 { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `delta_g_dinucleotide` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_snake_case)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable `deltaS` should have a snake case name [INFO] [stderr] --> src/main.rs:9:11 [INFO] [stderr] | [INFO] [stderr] 9 | let mut deltaS = 0.0; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaH` should have a snake case name [INFO] [stderr] --> src/main.rs:10:11 [INFO] [stderr] | [INFO] [stderr] 10 | let mut deltaH = 0.0; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:278:7 [INFO] [stderr] | [INFO] [stderr] 278 | let deltaG = deltaH - self.temperature * deltaS; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_g` [INFO] [stderr] [INFO] [stderr] warning: method `initiation_termination_deltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:282:4 [INFO] [stderr] | [INFO] [stderr] 282 | fn initiation_termination_deltaG(&self, template_nucleotide: String, oligo_nucleotide: String) -> f64 { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `initiation_termination_delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaH` should have a snake case name [INFO] [stderr] --> src/main.rs:284:7 [INFO] [stderr] | [INFO] [stderr] 284 | let deltaH = 9.62; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaS` should have a snake case name [INFO] [stderr] --> src/main.rs:285:7 [INFO] [stderr] | [INFO] [stderr] 285 | let deltaS = 17.15/1000.0; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaGinit` should have a snake case name [INFO] [stderr] --> src/main.rs:286:7 [INFO] [stderr] | [INFO] [stderr] 286 | let deltaGinit = deltaH - (self.temperature*deltaS); [INFO] [stderr] | ^^^^^^^^^^ help: convert the identifier to snake case: `delta_ginit` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaH` should have a snake case name [INFO] [stderr] --> src/main.rs:289:7 [INFO] [stderr] | [INFO] [stderr] 289 | let deltaH = 0.4184; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_h` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaS` should have a snake case name [INFO] [stderr] --> src/main.rs:290:7 [INFO] [stderr] | [INFO] [stderr] 290 | let deltaS = -11.72/1000.0; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_s` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaGinit` should have a snake case name [INFO] [stderr] --> src/main.rs:291:7 [INFO] [stderr] | [INFO] [stderr] 291 | let deltaGinit = deltaH - (self.temperature*deltaS); [INFO] [stderr] | ^^^^^^^^^^ help: convert the identifier to snake case: `delta_ginit` [INFO] [stderr] [INFO] [stderr] warning: method `calc_deltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:299:4 [INFO] [stderr] | [INFO] [stderr] 299 | fn calc_deltaG(&self, template_piece: String) -> f64{ [INFO] [stderr] | ^^^^^^^^^^^ help: convert the identifier to snake case: `calc_delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `deltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:300:10 [INFO] [stderr] | [INFO] [stderr] 300 | let mut deltaG = 0.0; [INFO] [stderr] | ^^^^^^ help: convert the identifier to snake case: `delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `initiation_deltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:303:11 [INFO] [stderr] | [INFO] [stderr] 303 | let mut initiation_deltaG = 0.0; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `initiation_delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `dinucleotide_deltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:306:11 [INFO] [stderr] | [INFO] [stderr] 306 | let mut dinucleotide_deltaG = self.deltaG_dinucleotide(template_dinucleotide.clone(), oligo_dinucleotide.clone()); [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ help: convert the identifier to snake case: `dinucleotide_delta_g` [INFO] [stderr] [INFO] [stderr] warning: method `lowest_deltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:320:5 [INFO] [stderr] | [INFO] [stderr] 320 | fn lowest_deltaG(&self) -> f64 { [INFO] [stderr] | ^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `lowestDeltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:321:11 [INFO] [stderr] | [INFO] [stderr] 321 | let mut lowestDeltaG = 0.0; [INFO] [stderr] | ^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `currentDeltaG` should have a snake case name [INFO] [stderr] --> src/main.rs:324:8 [INFO] [stderr] | [INFO] [stderr] 324 | let currentDeltaG = self.calc_deltaG(template_piece); [INFO] [stderr] | ^^^^^^^^^^^^^ help: convert the identifier to snake case: `current_delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `lowest_delta_G` should have a snake case name [INFO] [stderr] --> src/main.rs:339:6 [INFO] [stderr] | [INFO] [stderr] 339 | let lowest_delta_G = simulation.lowest_deltaG(); [INFO] [stderr] | ^^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stderr] [INFO] [stderr] warning: variable `lowest_delta_G` should have a snake case name [INFO] [stderr] --> src/main.rs:354:7 [INFO] [stderr] | [INFO] [stderr] 354 | let lowest_delta_G = simulation.lowest_deltaG(); [INFO] [stderr] | ^^^^^^^^^^^^^^ help: convert the identifier to snake case: `lowest_delta_g` [INFO] [stderr] [INFO] [stderr] warning: 21 warnings emitted [INFO] [stderr] [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.72s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/anneal_predictor-490e25fc2afaf608 [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::known_example ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::known_example stdout ---- [INFO] [stdout] template piece: "CGTTGA" [INFO] [stdout] thread 'tests::known_example' panicked at 'assertion failed: lowest_delta_G <= acceptable_range.start && [INFO] [stdout] lowest_delta_G > acceptable_range.end', src/main.rs:356:9 [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5564b93029a5 - backtrace::backtrace::libunwind::trace::hea89dfbbfe67f40d [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stdout] 1: 0x5564b93029a5 - backtrace::backtrace::trace_unsynchronized::h0513dd713d7644d4 [INFO] [stdout] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stdout] 2: 0x5564b93029a5 - std::sys_common::backtrace::_print_fmt::h040abae64e4a24a9 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stdout] 3: 0x5564b93029a5 - ::fmt::hb4bdb37c3c335733 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stdout] 4: 0x5564b932a61c - core::fmt::write::h540ac4a6a1232abc [INFO] [stdout] at src/libcore/fmt/mod.rs:1076 [INFO] [stdout] 5: 0x5564b92b7515 - std::io::Write::write_fmt::h4be0daababb55bba [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/io/mod.rs:1539 [INFO] [stdout] 6: 0x5564b92fd071 - std::io::impls::>::write_fmt::h83c1e1aa73f374f5 [INFO] [stdout] at src/libstd/io/impls.rs:176 [INFO] [stdout] 7: 0x5564b9305100 - std::sys_common::backtrace::_print::hb55cc635eaf1882e [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stdout] 8: 0x5564b9305100 - std::sys_common::backtrace::print::h2b2218fa55714084 [INFO] [stdout] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stdout] 9: 0x5564b9305100 - std::panicking::default_hook::{{closure}}::h578517c025765cf3 [INFO] [stdout] at src/libstd/panicking.rs:198 [INFO] [stdout] 10: 0x5564b9304dfa - std::panicking::default_hook::h4cafc94c2fc640fb [INFO] [stdout] at src/libstd/panicking.rs:214 [INFO] [stdout] 11: 0x5564b9305743 - std::panicking::rust_panic_with_hook::h3eeb5001beeca5c3 [INFO] [stdout] at src/libstd/panicking.rs:526 [INFO] [stdout] 12: 0x5564b92b23d5 - std::panicking::begin_panic::h476048cd0efe6924 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panicking.rs:456 [INFO] [stdout] 13: 0x5564b92b56d2 - anneal_predictor::tests::known_example::h14e711518fc786a1 [INFO] [stdout] at src/main.rs:356 [INFO] [stdout] 14: 0x5564b92b552a - anneal_predictor::tests::known_example::{{closure}}::he58b6137d6080b8f [INFO] [stdout] at src/main.rs:349 [INFO] [stdout] 15: 0x5564b92b0fae - core::ops::function::FnOnce::call_once::h9640ad4c3df11999 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libcore/ops/function.rs:233 [INFO] [stdout] 16: 0x5564b92dea8c - as core::ops::function::FnOnce>::call_once::h8340ba6798e0c4ff [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/liballoc/boxed.rs:1081 [INFO] [stdout] 17: 0x5564b92dea8c - as core::ops::function::FnOnce<()>>::call_once::h5590e98676605094 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panic.rs:318 [INFO] [stdout] 18: 0x5564b92dea8c - std::panicking::try::do_call::hd8680a2dbb0ed3c4 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panicking.rs:348 [INFO] [stdout] 19: 0x5564b92dea8c - std::panicking::try::h46b4de2d705e7a8d [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panicking.rs:325 [INFO] [stdout] 20: 0x5564b92dea8c - std::panic::catch_unwind::h059b3f06991e0a9c [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panic.rs:394 [INFO] [stdout] 21: 0x5564b92dea8c - test::run_test_in_process::h5ae08a65430494a4 [INFO] [stdout] at src/libtest/lib.rs:541 [INFO] [stdout] 22: 0x5564b92dea8c - test::run_test::run_test_inner::{{closure}}::h4b36073838376ae8 [INFO] [stdout] at src/libtest/lib.rs:450 [INFO] [stdout] 23: 0x5564b92b6a06 - std::sys_common::backtrace::__rust_begin_short_backtrace::h0169d0be588b8bf0 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/sys_common/backtrace.rs:130 [INFO] [stdout] 24: 0x5564b92bb9f5 - std::thread::Builder::spawn_unchecked::{{closure}}::{{closure}}::h71bfc37e887d3973 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/thread/mod.rs:475 [INFO] [stdout] 25: 0x5564b92bb9f5 - as core::ops::function::FnOnce<()>>::call_once::h36c65072907dc180 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panic.rs:318 [INFO] [stdout] 26: 0x5564b92bb9f5 - std::panicking::try::do_call::h4e0f426e17cd216c [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panicking.rs:348 [INFO] [stdout] 27: 0x5564b92bb9f5 - std::panicking::try::hd05e4ef6b4303d29 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panicking.rs:325 [INFO] [stdout] 28: 0x5564b92bb9f5 - std::panic::catch_unwind::h19a1127ec729c5dd [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/panic.rs:394 [INFO] [stdout] 29: 0x5564b92bb9f5 - std::thread::Builder::spawn_unchecked::{{closure}}::h011300735f06b1e2 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libstd/thread/mod.rs:474 [INFO] [stdout] 30: 0x5564b92bb9f5 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h1e3c55f31f1d122e [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/libcore/ops/function.rs:233 [INFO] [stdout] 31: 0x5564b930b91a - as core::ops::function::FnOnce>::call_once::hc0e15d78a519721e [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/liballoc/boxed.rs:1081 [INFO] [stdout] 32: 0x5564b930b91a - as core::ops::function::FnOnce>::call_once::h211da8fffb09f192 [INFO] [stdout] at /rustc/8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e/src/liballoc/boxed.rs:1081 [INFO] [stdout] 33: 0x5564b930b91a - std::sys::unix::thread::Thread::new::thread_start::h29594ddebf23e421 [INFO] [stdout] at src/libstd/sys/unix/thread.rs:87 [INFO] [stdout] 34: 0x7f3e859a8609 - start_thread [INFO] [stdout] 35: 0x7f3e858b4103 - __clone [INFO] [stdout] 36: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::known_example [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass '--bin anneal_predictor' [INFO] running `Command { std: "docker" "inspect" "da531365ad3fe1b98b90b263a2d69f672608921b790fc5b13c9080f24e218581", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "da531365ad3fe1b98b90b263a2d69f672608921b790fc5b13c9080f24e218581", kill_on_drop: false }` [INFO] [stdout] da531365ad3fe1b98b90b263a2d69f672608921b790fc5b13c9080f24e218581