[INFO] updating cached repository https://github.com/brainstorm/htsget-indexer [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 182650b6518cdeefad31ab1ca4aa5cb1666e0ab2 [INFO] testing brainstorm/htsget-indexer against master#8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e for pr-74409 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbrainstorm%2Fhtsget-indexer" "/workspace/builds/worker-4/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-4/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/brainstorm/htsget-indexer on toolchain 8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/brainstorm/htsget-indexer [INFO] finished tweaking git repo https://github.com/brainstorm/htsget-indexer [INFO] tweaked toml for git repo https://github.com/brainstorm/htsget-indexer written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 43aab91b0fda0218b7346e168a46c0c5a1fe7be41f7aba46fcbc1e6bace5753f [INFO] running `Command { std: "docker" "start" "-a" "43aab91b0fda0218b7346e168a46c0c5a1fe7be41f7aba46fcbc1e6bace5753f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "43aab91b0fda0218b7346e168a46c0c5a1fe7be41f7aba46fcbc1e6bace5753f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "43aab91b0fda0218b7346e168a46c0c5a1fe7be41f7aba46fcbc1e6bace5753f", kill_on_drop: false }` [INFO] [stdout] 43aab91b0fda0218b7346e168a46c0c5a1fe7be41f7aba46fcbc1e6bace5753f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 54d61692a92f934c4ad33f092c2c5cd657c9739293c75a2196bb4d033e867b88 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "54d61692a92f934c4ad33f092c2c5cd657c9739293c75a2196bb4d033e867b88", kill_on_drop: false }` [INFO] [stderr] Compiling cc v1.0.58 [INFO] [stderr] Compiling libc v0.2.73 [INFO] [stderr] Compiling proc-macro2 v1.0.19 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling pkg-config v0.3.18 [INFO] [stderr] Compiling syn v1.0.35 [INFO] [stderr] Compiling version_check v0.1.5 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling proc-macro2 v0.4.30 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling log v0.4.11 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling unicode-xid v0.1.0 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling serde_derive v1.0.114 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling serde v1.0.114 [INFO] [stderr] Compiling bindgen v0.51.1 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling termcolor v1.1.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling syn v0.15.44 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling adler v0.2.3 [INFO] [stderr] Compiling gimli v0.22.0 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling matches v0.1.8 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling tinyvec v0.3.3 [INFO] [stderr] Compiling object v0.20.0 [INFO] [stderr] Compiling rustc-demangle v0.1.16 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling percent-encoding v2.1.0 [INFO] [stderr] Compiling either v1.5.3 [INFO] [stderr] Compiling serde_json v1.0.56 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling itoa v0.4.6 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling miniz_oxide v0.4.0 [INFO] [stderr] Compiling unicode-bidi v0.3.4 [INFO] [stderr] Compiling clang-sys v0.28.1 [INFO] [stderr] Compiling itertools v0.8.2 [INFO] [stderr] Compiling unicode-normalization v0.1.13 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling quote v0.6.13 [INFO] [stderr] Compiling libloading v0.5.2 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling bzip2-sys v0.1.9+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.16 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Compiling quote v1.0.7 [INFO] [stderr] Compiling idna v0.2.0 [INFO] [stderr] Compiling clap v2.33.1 [INFO] [stderr] Compiling cexpr v0.3.6 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling url v2.1.1 [INFO] [stderr] Compiling addr2line v0.13.0 [INFO] [stderr] Compiling env_logger v0.6.2 [INFO] [stderr] Compiling backtrace v0.3.50 [INFO] [stderr] Compiling snafu-derive v0.5.0 [INFO] [stderr] Compiling derive-new v0.5.8 [INFO] [stderr] Compiling snafu-derive v0.6.8 [INFO] [stderr] Compiling snafu v0.5.0 [INFO] [stderr] Compiling snafu v0.6.8 [INFO] [stderr] Compiling rust-htslib v0.26.1 [INFO] [stderr] Compiling bio-types v0.7.0 [INFO] [stderr] Compiling htsget-indexer v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 2m 29s [INFO] running `Command { std: "docker" "inspect" "54d61692a92f934c4ad33f092c2c5cd657c9739293c75a2196bb4d033e867b88", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "54d61692a92f934c4ad33f092c2c5cd657c9739293c75a2196bb4d033e867b88", kill_on_drop: false }` [INFO] [stdout] 54d61692a92f934c4ad33f092c2c5cd657c9739293c75a2196bb4d033e867b88 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 873d0155f567a7cfee6b4d0f79377e11abd4ef0aad20973b9364e502cbf495f1 [INFO] running `Command { std: "docker" "start" "-a" "873d0155f567a7cfee6b4d0f79377e11abd4ef0aad20973b9364e502cbf495f1", kill_on_drop: false }` [INFO] [stderr] Compiling htsget-indexer v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 1.02s [INFO] running `Command { std: "docker" "inspect" "873d0155f567a7cfee6b4d0f79377e11abd4ef0aad20973b9364e502cbf495f1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "873d0155f567a7cfee6b4d0f79377e11abd4ef0aad20973b9364e502cbf495f1", kill_on_drop: false }` [INFO] [stdout] 873d0155f567a7cfee6b4d0f79377e11abd4ef0aad20973b9364e502cbf495f1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:38e1b949b06cde1964af550a6e548bd9b2b2ea170003ae122f8fc0886596cc07" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] fb548dc2e063b74f1e5849948b69ed81d5f2e9df8cbf02ef21c1e557a94d6850 [INFO] running `Command { std: "docker" "start" "-a" "fb548dc2e063b74f1e5849948b69ed81d5f2e9df8cbf02ef21c1e557a94d6850", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.14s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/htsget_indexer-463477e8de7de560 [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "fb548dc2e063b74f1e5849948b69ed81d5f2e9df8cbf02ef21c1e557a94d6850", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fb548dc2e063b74f1e5849948b69ed81d5f2e9df8cbf02ef21c1e557a94d6850", kill_on_drop: false }` [INFO] [stdout] fb548dc2e063b74f1e5849948b69ed81d5f2e9df8cbf02ef21c1e557a94d6850