[INFO] updating cached repository https://github.com/ban-m/partial_order_alignment [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] [stderr] From https://github.com/ban-m/partial_order_alignment [INFO] [stderr] f14be55..462f66a master -> master [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 462f66ac12f6761aeac52aa5fc3030e9be978129 [INFO] testing ban-m/partial_order_alignment against master#8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e for pr-74409 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fban-m%2Fpartial_order_alignment" "/workspace/builds/worker-5/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/ban-m/partial_order_alignment on toolchain 8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/ban-m/partial_order_alignment [INFO] finished tweaking git repo https://github.com/ban-m/partial_order_alignment [INFO] tweaked toml for git repo https://github.com/ban-m/partial_order_alignment written to /workspace/builds/worker-5/source/Cargo.toml [INFO] crate git repo https://github.com/ban-m/partial_order_alignment already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 98ead2890c1243200d8172c2924a3919c4f4037642d1b6834103120fa6ae1f96 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "98ead2890c1243200d8172c2924a3919c4f4037642d1b6834103120fa6ae1f96", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "98ead2890c1243200d8172c2924a3919c4f4037642d1b6834103120fa6ae1f96", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "98ead2890c1243200d8172c2924a3919c4f4037642d1b6834103120fa6ae1f96", kill_on_drop: false }` [INFO] [stdout] 98ead2890c1243200d8172c2924a3919c4f4037642d1b6834103120fa6ae1f96 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d14dc8a83649d601c0394aba72270d85aeae06e8f35d9524c4fd838a06a473ce [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "d14dc8a83649d601c0394aba72270d85aeae06e8f35d9524c4fd838a06a473ce", kill_on_drop: false }` [INFO] [stderr] Compiling ppv-lite86 v0.2.6 [INFO] [stderr] Compiling log v0.4.8 [INFO] [stderr] Compiling getrandom v0.1.14 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_xoshiro v0.4.0 [INFO] [stderr] Compiling c2-chacha v0.2.3 [INFO] [stderr] Compiling rand_chacha v0.2.1 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 9.07s [INFO] running `Command { std: "docker" "inspect" "d14dc8a83649d601c0394aba72270d85aeae06e8f35d9524c4fd838a06a473ce", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d14dc8a83649d601c0394aba72270d85aeae06e8f35d9524c4fd838a06a473ce", kill_on_drop: false }` [INFO] [stdout] d14dc8a83649d601c0394aba72270d85aeae06e8f35d9524c4fd838a06a473ce [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 8ff9192ef8a7c5778139ec7ee904094cbb03b7090e64833cf4ca6e4aa55f22a9 [INFO] running `Command { std: "docker" "start" "-a" "8ff9192ef8a7c5778139ec7ee904094cbb03b7090e64833cf4ca6e4aa55f22a9", kill_on_drop: false }` [INFO] [stderr] Compiling semver-parser v0.7.0 [INFO] [stderr] Compiling crossbeam-utils v0.7.2 [INFO] [stderr] Compiling crossbeam-epoch v0.8.2 [INFO] [stderr] Compiling semver v0.9.0 [INFO] [stderr] Compiling rustc_version v0.2.3 [INFO] [stderr] Compiling memoffset v0.5.3 [INFO] [stderr] Compiling crossbeam-queue v0.2.1 [INFO] [stderr] Compiling crossbeam-deque v0.7.3 [INFO] [stderr] Compiling rayon-core v1.7.0 [INFO] [stderr] Compiling rayon v1.3.0 [INFO] [stderr] Compiling poa_hmm v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 17.56s [INFO] running `Command { std: "docker" "inspect" "8ff9192ef8a7c5778139ec7ee904094cbb03b7090e64833cf4ca6e4aa55f22a9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8ff9192ef8a7c5778139ec7ee904094cbb03b7090e64833cf4ca6e4aa55f22a9", kill_on_drop: false }` [INFO] [stdout] 8ff9192ef8a7c5778139ec7ee904094cbb03b7090e64833cf4ca6e4aa55f22a9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:d9fbb4e2287ab3795bdefaf705efb7541a8875c13bce71e067d6b01dc5ed759b" "/opt/rustwide/cargo-home/bin/cargo" "+8534be72fc3b9c5f2f2dc4e4ee7b651a008e9a3e" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 2dd2d3523eae85f0803938489b9e873474fdad9e063e2fc855eb33e230d00b9d [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "2dd2d3523eae85f0803938489b9e873474fdad9e063e2fc855eb33e230d00b9d", kill_on_drop: false }` [INFO] [stderr] Finished test [unoptimized + debuginfo] target(s) in 0.28s [INFO] [stderr] Running /opt/rustwide/target/debug/deps/poa_hmm-42057f54fc238679 [INFO] [stdout] [INFO] [stdout] running 27 tests [INFO] [stdout] test tests::abundance_test_prior ... ignored [INFO] [stdout] test tests::create ... ok [INFO] [stdout] test tests::init ... ok [INFO] [stdout] test tests::it_works ... ok [INFO] [stdout] test tests::deletion_test ... ok [INFO] [stdout] test tests::initialize ... ok [INFO] [stdout] test tests::add ... ok [INFO] [stdout] test tests::deletion_test_banded ... ok [INFO] [stdout] test tests::insertion_test ... ok [INFO] [stdout] test tests::single_error_banded_test ... ignored [INFO] [stdout] test tests::single_error_ccs_test ... ignored [INFO] [stdout] test tests::single_error_test ... ignored [INFO] [stdout] test base_table::tests::test ... ok [INFO] [stdout] test tests::mismatch_test ... ok [INFO] [stdout] test tests::insertion_test_banded ... ok [INFO] [stdout] test tests::mismatch_test_banded ... ok [INFO] [stdout] test tests::forward ... ok [INFO] [stdout] test tests::merge_test ... ok [INFO] [stdout] test tests::low_coverage_test ... ok [INFO] [stdout] test tests::forward_check ... ok [INFO] [stdout] test tests::connectivity_check ... ok [INFO] [stdout] test tests::alignment_check ... ok [INFO] [stdout] test tests::hard_test ... ok [INFO] [stdout] test tests::high_coverage_test ... ok [INFO] [stdout] test tests::random_check ... ok [INFO] [stdout] test tests::mix_test_prior ... test tests::mix_test_prior has been running for over 60 seconds [INFO] [stdout] test tests::random_check_forward ... test tests::random_check_forward has been running for over 60 seconds [INFO] [stdout] test tests::random_check_forward ... ok [INFO] [stdout] test tests::mix_test_prior ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 23 passed; 0 failed; 4 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] [stderr] Doc-tests poa_hmm [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test src/lib.rs - PartialOrderAlignment::view (line 96) ... ok [INFO] [stdout] test src/multipse_sequence_alignment.rs - multipse_sequence_alignment::MultipseSequenceAlignment (line 5) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "2dd2d3523eae85f0803938489b9e873474fdad9e063e2fc855eb33e230d00b9d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2dd2d3523eae85f0803938489b9e873474fdad9e063e2fc855eb33e230d00b9d", kill_on_drop: false }` [INFO] [stdout] 2dd2d3523eae85f0803938489b9e873474fdad9e063e2fc855eb33e230d00b9d