[INFO] updating cached repository https://github.com/URI-ABD/genomic_distance
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }`
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 4c1b7afcda5ed9dd2d4704269275c7dcff4fae7d
[INFO] checking URI-ABD/genomic_distance against master#e1beee4992ad4b235fc700bf7af1ee86f894ea53 for pr-74130
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FURI-ABD%2Fgenomic_distance" "/workspace/builds/worker-1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/URI-ABD/genomic_distance on toolchain e1beee4992ad4b235fc700bf7af1ee86f894ea53
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+e1beee4992ad4b235fc700bf7af1ee86f894ea53" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/URI-ABD/genomic_distance
[INFO] finished tweaking git repo https://github.com/URI-ABD/genomic_distance
[INFO] tweaked toml for git repo https://github.com/URI-ABD/genomic_distance written to /workspace/builds/worker-1/source/Cargo.toml
[INFO] crate git repo https://github.com/URI-ABD/genomic_distance already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+e1beee4992ad4b235fc700bf7af1ee86f894ea53" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+e1beee4992ad4b235fc700bf7af1ee86f894ea53" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6bdc214d300f96edb9cd037958e22ba34bf95778ce1c6eee15144ea7b61bc609
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "6bdc214d300f96edb9cd037958e22ba34bf95778ce1c6eee15144ea7b61bc609", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6bdc214d300f96edb9cd037958e22ba34bf95778ce1c6eee15144ea7b61bc609", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6bdc214d300f96edb9cd037958e22ba34bf95778ce1c6eee15144ea7b61bc609", kill_on_drop: false }`
[INFO] [stdout] 6bdc214d300f96edb9cd037958e22ba34bf95778ce1c6eee15144ea7b61bc609
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+e1beee4992ad4b235fc700bf7af1ee86f894ea53" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 782ea4be949d0c76fbb3013ba8c9d5541fb8360914d440a854d7d8d88db674da
[INFO] running `Command { std: "docker" "start" "-a" "782ea4be949d0c76fbb3013ba8c9d5541fb8360914d440a854d7d8d88db674da", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v1.0.17
[INFO] [stderr]    Compiling libc v0.2.68
[INFO] [stderr]    Compiling autocfg v0.1.7
[INFO] [stderr]     Checking rand_core v0.4.2
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling cc v1.0.50
[INFO] [stderr]    Compiling maybe-uninit v2.0.0
[INFO] [stderr]    Compiling rustversion v1.0.2
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]    Compiling ryu v1.0.3
[INFO] [stderr]     Checking either v1.5.3
[INFO] [stderr]    Compiling unicode-segmentation v1.6.0
[INFO] [stderr]     Checking regex-syntax v0.6.17
[INFO] [stderr]    Compiling standback v0.2.2
[INFO] [stderr]     Checking rustc-demangle v0.1.16
[INFO] [stderr]    Compiling proc-macro-hack v0.5.15
[INFO] [stderr]    Compiling ndarray v0.13.0
[INFO] [stderr]    Compiling rayon-core v1.7.0
[INFO] [stderr]     Checking ordermap v0.3.5
[INFO] [stderr]     Checking itoa v0.4.5
[INFO] [stderr]    Compiling bio v0.30.0
[INFO] [stderr]     Checking quick-error v1.2.3
[INFO] [stderr]     Checking fixedbitset v0.1.9
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking fnv v1.0.6
[INFO] [stderr]     Checking strum v0.16.0
[INFO] [stderr]     Checking bytecount v0.6.0
[INFO] [stderr]    Compiling num-integer v0.1.42
[INFO] [stderr]    Compiling crossbeam-utils v0.7.2
[INFO] [stderr]    Compiling memoffset v0.5.4
[INFO] [stderr]    Compiling crossbeam-epoch v0.8.2
[INFO] [stderr]    Compiling num-complex v0.2.4
[INFO] [stderr]    Compiling num-bigint v0.2.6
[INFO] [stderr]     Checking thread_local v1.0.1
[INFO] [stderr]    Compiling num-rational v0.2.4
[INFO] [stderr]    Compiling num-iter v0.1.40
[INFO] [stderr]     Checking itertools v0.8.2
[INFO] [stderr]     Checking rand_core v0.3.1
[INFO] [stderr]     Checking rand_jitter v0.1.4
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling proc-macro2 v1.0.10
[INFO] [stderr]    Compiling rand_chacha v0.1.1
[INFO] [stderr]    Compiling rand_pcg v0.1.2
[INFO] [stderr]    Compiling rand v0.6.5
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking petgraph v0.4.13
[INFO] [stderr]     Checking rand_isaac v0.1.1
[INFO] [stderr]     Checking rand_hc v0.1.0
[INFO] [stderr]     Checking rand_xorshift v0.1.1
[INFO] [stderr]     Checking csv-core v0.1.10
[INFO] [stderr]     Checking regex-automata v0.1.9
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking approx v0.3.2
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v1.0.2
[INFO] [stderr]     Checking float-cmp v0.6.0
[INFO] [stderr]    Compiling quote v1.0.3
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]    Compiling backtrace-sys v0.1.35
[INFO] [stderr]     Checking crossbeam-queue v0.2.1
[INFO] [stderr]     Checking rand_os v0.1.3
[INFO] [stderr]     Checking num_cpus v1.12.0
[INFO] [stderr]     Checking crossbeam-deque v0.7.3
[INFO] [stderr]     Checking regex v1.3.6
[INFO] [stderr]     Checking backtrace v0.3.46
[INFO] [stderr]     Checking rayon v1.3.0
[INFO] [stderr]     Checking statrs v0.11.0
[INFO] [stderr]     Checking num v0.2.1
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]     Checking snafu v0.5.0
[INFO] [stderr]    Compiling serde_derive v1.0.105
[INFO] [stderr]    Compiling derive-new v0.5.8
[INFO] [stderr]    Compiling time-macros-impl v0.1.0
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling strum_macros v0.16.0
[INFO] [stderr]    Compiling time v0.2.9
[INFO] [stderr]     Checking time-macros v0.1.0
[INFO] [stderr]     Checking serde v1.0.105
[INFO] [stderr]     Checking bstr v0.2.12
[INFO] [stderr]     Checking bio-types v0.6.0
[INFO] [stderr]     Checking vec_map v0.8.1
[INFO] [stderr]     Checking multimap v0.6.0
[INFO] [stderr]     Checking bv v0.11.1
[INFO] [stderr]     Checking csv v1.1.3
[INFO] [stderr]     Checking genomic_distance v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 2m 23s
[INFO] running `Command { std: "docker" "inspect" "782ea4be949d0c76fbb3013ba8c9d5541fb8360914d440a854d7d8d88db674da", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "782ea4be949d0c76fbb3013ba8c9d5541fb8360914d440a854d7d8d88db674da", kill_on_drop: false }`
[INFO] [stdout] 782ea4be949d0c76fbb3013ba8c9d5541fb8360914d440a854d7d8d88db674da