[INFO] crate hdf5-sys 0.6.1 is already in cache [INFO] documenting hdf5-sys-0.6.1 against try#66dfc4e010913fbed0c4ea91fc2c010004b0f441 for pr-73566 [INFO] extracting crate hdf5-sys 0.6.1 into /workspace/builds/worker-4/source [INFO] validating manifest of crates.io crate hdf5-sys 0.6.1 on toolchain 66dfc4e010913fbed0c4ea91fc2c010004b0f441 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking crates.io crate hdf5-sys 0.6.1 [INFO] finished tweaking crates.io crate hdf5-sys 0.6.1 [INFO] tweaked toml for crates.io crate hdf5-sys 0.6.1 written to /workspace/builds/worker-4/source/Cargo.toml [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 0d4497e6a7ea229d7c144bc228c79388405de9d6206fcaa0e11a07e9463df26f [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "0d4497e6a7ea229d7c144bc228c79388405de9d6206fcaa0e11a07e9463df26f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0d4497e6a7ea229d7c144bc228c79388405de9d6206fcaa0e11a07e9463df26f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0d4497e6a7ea229d7c144bc228c79388405de9d6206fcaa0e11a07e9463df26f", kill_on_drop: false }` [INFO] [stdout] 0d4497e6a7ea229d7c144bc228c79388405de9d6206fcaa0e11a07e9463df26f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] [stdout] 01532216aae710df8c36229fc665e21b481a6cf0496546e21fa7ae13d6b308c6 [INFO] running `Command { std: "docker" "start" "-a" "01532216aae710df8c36229fc665e21b481a6cf0496546e21fa7ae13d6b308c6", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling libloading v0.6.2 [INFO] [stderr] Compiling regex-syntax v0.6.18 [INFO] [stderr] Compiling pkg-config v0.3.17 [INFO] [stderr] Compiling libc v0.2.71 [INFO] [stderr] Compiling thread_local v1.0.1 [INFO] [stderr] Compiling aho-corasick v0.7.13 [INFO] [stderr] Compiling regex v1.3.9 [INFO] [stderr] Compiling hdf5-sys v0.6.1 (/opt/rustwide/workdir) [INFO] [stderr] error: failed to run custom build command for `hdf5-sys v0.6.1 (/opt/rustwide/workdir)` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/hdf5-sys-00288c117f193499/build-script-build` (exit code: 101) [INFO] [stderr] --- stdout [INFO] [stderr] Attempting to find HDF5 via pkg-config... [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] thread 'main' panicked at 'Unable to locate HDF5 root directory and/or headers.', build.rs:523:13 [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x55ea1a0f9a75 - backtrace::backtrace::libunwind::trace::h34afbfad7fd770fc [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86 [INFO] [stderr] 1: 0x55ea1a0f9a75 - backtrace::backtrace::trace_unsynchronized::h460d522b1619a600 [INFO] [stderr] at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66 [INFO] [stderr] 2: 0x55ea1a0f9a75 - std::sys_common::backtrace::_print_fmt::ha45fac10086813b4 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:78 [INFO] [stderr] 3: 0x55ea1a0f9a75 - ::fmt::hde84f63fcfd0e6de [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:59 [INFO] [stderr] 4: 0x55ea1a11d64c - core::fmt::write::h540ac4a6a1232abc [INFO] [stderr] at src/libcore/fmt/mod.rs:1076 [INFO] [stderr] 5: 0x55ea1a0f67f3 - std::io::Write::write_fmt::hc344eafd6e850b4d [INFO] [stderr] at src/libstd/io/mod.rs:1537 [INFO] [stderr] 6: 0x55ea1a0fc060 - std::sys_common::backtrace::_print::h4db88ff15cb5d61d [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:62 [INFO] [stderr] 7: 0x55ea1a0fc060 - std::sys_common::backtrace::print::h5fc39e1b1f610bd3 [INFO] [stderr] at src/libstd/sys_common/backtrace.rs:49 [INFO] [stderr] 8: 0x55ea1a0fc060 - std::panicking::default_hook::{{closure}}::h59e55edacb1d974a [INFO] [stderr] at src/libstd/panicking.rs:198 [INFO] [stderr] 9: 0x55ea1a0fbdac - std::panicking::default_hook::heee4c8016dfbf328 [INFO] [stderr] at src/libstd/panicking.rs:217 [INFO] [stderr] 10: 0x55ea1a0fc6a3 - std::panicking::rust_panic_with_hook::h8405b6301c79fb5a [INFO] [stderr] at src/libstd/panicking.rs:520 [INFO] [stderr] 11: 0x55ea1a016659 - std::panicking::begin_panic::h03c1b7f92d819e01 [INFO] [stderr] at /rustc/66dfc4e010913fbed0c4ea91fc2c010004b0f441/src/libstd/panicking.rs:450 [INFO] [stderr] 12: 0x55ea19ed854c - build_script_build::LibrarySearcher::try_locate_hdf5_library::h8d3510ad790cf42a [INFO] [stderr] at /opt/rustwide/workdir/build.rs:523 [INFO] [stderr] 13: 0x55ea19ed98fc - build_script_build::main::h0c6e801e439f117e [INFO] [stderr] at /opt/rustwide/workdir/build.rs:601 [INFO] [stderr] 14: 0x55ea19ee3dcb - std::rt::lang_start::{{closure}}::h8a671abf03d514e8 [INFO] [stderr] at /rustc/66dfc4e010913fbed0c4ea91fc2c010004b0f441/src/libstd/rt.rs:67 [INFO] [stderr] 15: 0x55ea1a0fca78 - std::rt::lang_start_internal::{{closure}}::h7cea099ad4edf1eb [INFO] [stderr] at src/libstd/rt.rs:52 [INFO] [stderr] 16: 0x55ea1a0fca78 - std::panicking::try::do_call::h42d93372c44025d2 [INFO] [stderr] at src/libstd/panicking.rs:342 [INFO] [stderr] 17: 0x55ea1a0fca78 - std::panicking::try::hb47a4182362d3341 [INFO] [stderr] at src/libstd/panicking.rs:319 [INFO] [stderr] 18: 0x55ea1a0fca78 - std::panic::catch_unwind::h2afcfbf3125915b4 [INFO] [stderr] at src/libstd/panic.rs:394 [INFO] [stderr] 19: 0x55ea1a0fca78 - std::rt::lang_start_internal::h4f696727fe904f48 [INFO] [stderr] at src/libstd/rt.rs:51 [INFO] [stderr] 20: 0x55ea19ee3da7 - std::rt::lang_start::hcb9a1cf1042787bf [INFO] [stderr] at /rustc/66dfc4e010913fbed0c4ea91fc2c010004b0f441/src/libstd/rt.rs:67 [INFO] [stderr] 21: 0x55ea19eda3aa - main [INFO] [stderr] 22: 0x7f6a48cb70b3 - __libc_start_main [INFO] [stderr] 23: 0x55ea19ed419e - _start [INFO] [stderr] 24: 0x0 - [INFO] [stderr] [INFO] running `Command { std: "docker" "inspect" "01532216aae710df8c36229fc665e21b481a6cf0496546e21fa7ae13d6b308c6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "01532216aae710df8c36229fc665e21b481a6cf0496546e21fa7ae13d6b308c6", kill_on_drop: false }` [INFO] [stdout] 01532216aae710df8c36229fc665e21b481a6cf0496546e21fa7ae13d6b308c6