[INFO] updating cached repository https://github.com/guertinlab/kmer_mask_em [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }` [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] c1ae4fc642bd6330c9db7a4cf31f9b304ff6a874 [INFO] documenting guertinlab/kmer_mask_em against try#66dfc4e010913fbed0c4ea91fc2c010004b0f441 for pr-73566 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fguertinlab%2Fkmer_mask_em" "/workspace/builds/worker-1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/guertinlab/kmer_mask_em on toolchain 66dfc4e010913fbed0c4ea91fc2c010004b0f441 [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/guertinlab/kmer_mask_em [INFO] finished tweaking git repo https://github.com/guertinlab/kmer_mask_em [INFO] tweaked toml for git repo https://github.com/guertinlab/kmer_mask_em written to /workspace/builds/worker-1/source/Cargo.toml [INFO] crate git repo https://github.com/guertinlab/kmer_mask_em already has a lockfile, it will not be regenerated [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] error: the lock file /workspace/builds/worker-1/source/Cargo.lock needs to be updated but --locked was passed to prevent this [INFO] [stderr] If you want to try to generate the lock file without accessing the network, use the --offline flag. [INFO] the lockfile is outdated, regenerating it [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "generate-lockfile" "--manifest-path" "Cargo.toml" "-Zno-index-update", kill_on_drop: false }` [INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 5cea6a98093e12ebb7743ef3206c61e3824e2edf747876991e02811aaab442bf [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "5cea6a98093e12ebb7743ef3206c61e3824e2edf747876991e02811aaab442bf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "5cea6a98093e12ebb7743ef3206c61e3824e2edf747876991e02811aaab442bf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5cea6a98093e12ebb7743ef3206c61e3824e2edf747876991e02811aaab442bf", kill_on_drop: false }` [INFO] [stdout] 5cea6a98093e12ebb7743ef3206c61e3824e2edf747876991e02811aaab442bf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:819119df93c0f5eca3f29186f14981ef29945a311854d7222af07488600a2584" "/opt/rustwide/cargo-home/bin/cargo" "+66dfc4e010913fbed0c4ea91fc2c010004b0f441" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4aeaf6b258b0f22cb7834db3611205214df450e032469def210360d9e2caa867 [INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap. [INFO] running `Command { std: "docker" "start" "-a" "4aeaf6b258b0f22cb7834db3611205214df450e032469def210360d9e2caa867", kill_on_drop: false }` [INFO] [stderr] Compiling memchr v2.3.3 [INFO] [stderr] Checking ucd-util v0.1.8 [INFO] [stderr] Checking utf8-ranges v1.0.4 [INFO] [stderr] Checking deque v0.3.2 [INFO] [stderr] Checking thread_local v0.3.6 [INFO] [stderr] Checking rand v0.4.6 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Checking tabwriter v1.2.1 [INFO] [stderr] Checking regex-syntax v0.5.6 [INFO] [stderr] Checking aho-corasick v0.6.10 [INFO] [stderr] Checking rand v0.3.23 [INFO] [stderr] Checking rayon v0.6.0 [INFO] [stderr] Checking regex v0.2.11 [INFO] [stderr] Checking docopt v0.7.0 [INFO] [stderr] Documenting kmermask_em v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished dev [unoptimized + debuginfo] target(s) in 13.17s [INFO] running `Command { std: "docker" "inspect" "4aeaf6b258b0f22cb7834db3611205214df450e032469def210360d9e2caa867", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4aeaf6b258b0f22cb7834db3611205214df450e032469def210360d9e2caa867", kill_on_drop: false }` [INFO] [stdout] 4aeaf6b258b0f22cb7834db3611205214df450e032469def210360d9e2caa867