[INFO] updating cached repository https://github.com/10XGenomics/vartrix
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "-c" "remote.origin.fetch=refs/heads/*:refs/heads/*" "fetch" "origin" "--force" "--prune", kill_on_drop: false }`
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ee58dab610c5be5e8605aa913610eb510f49f1b6
[INFO] checking 10XGenomics/vartrix against try#c8bdaa84ec1b37f18f30375e196a65b7602f3790 for pr-73345
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F10XGenomics%2Fvartrix" "/workspace/builds/worker-13/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-13/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/10XGenomics/vartrix on toolchain c8bdaa84ec1b37f18f30375e196a65b7602f3790
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+c8bdaa84ec1b37f18f30375e196a65b7602f3790" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] finished tweaking git repo https://github.com/10XGenomics/vartrix
[INFO] tweaked toml for git repo https://github.com/10XGenomics/vartrix written to /workspace/builds/worker-13/source/Cargo.toml
[INFO] crate git repo https://github.com/10XGenomics/vartrix already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+c8bdaa84ec1b37f18f30375e196a65b7602f3790" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:6c9ffe128752d56c8d75334ed354142a5229917ed99767f56566dd8e857ad726" "/opt/rustwide/cargo-home/bin/cargo" "+c8bdaa84ec1b37f18f30375e196a65b7602f3790" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 8b750626e0e26909e1e178adb541a0e62c111be1dd87ca86fa04a97e833f979f
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "8b750626e0e26909e1e178adb541a0e62c111be1dd87ca86fa04a97e833f979f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "8b750626e0e26909e1e178adb541a0e62c111be1dd87ca86fa04a97e833f979f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8b750626e0e26909e1e178adb541a0e62c111be1dd87ca86fa04a97e833f979f", kill_on_drop: false }`
[INFO] [stdout] 8b750626e0e26909e1e178adb541a0e62c111be1dd87ca86fa04a97e833f979f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-13/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "MAP_USER_ID=0" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--network" "none" "rustops/crates-build-env@sha256:6c9ffe128752d56c8d75334ed354142a5229917ed99767f56566dd8e857ad726" "/opt/rustwide/cargo-home/bin/cargo" "+c8bdaa84ec1b37f18f30375e196a65b7602f3790" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] bc8b31de33456fd6ed4d9bdd8cd44407bb376551cba051c13910fd4042a2b9a8
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "bc8b31de33456fd6ed4d9bdd8cd44407bb376551cba051c13910fd4042a2b9a8", kill_on_drop: false }`
[INFO] [stderr] sudo: setrlimit(RLIMIT_CORE): Operation not permitted
[INFO] [stderr]    Compiling unicode-xid v0.2.0
[INFO] [stderr]    Compiling memchr v2.2.1
[INFO] [stderr]    Compiling syn v1.0.5
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking rand_core v0.4.2
[INFO] [stderr]    Compiling proc-macro2 v0.4.30
[INFO] [stderr]    Compiling semver-parser v0.7.0
[INFO] [stderr]    Compiling syn v0.15.44
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling version_check v0.1.5
[INFO] [stderr]    Compiling doc-comment v0.3.1
[INFO] [stderr]    Compiling bindgen v0.52.0
[INFO] [stderr]    Compiling getrandom v0.1.12
[INFO] [stderr]     Checking nodrop v0.1.13
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling lazycell v1.2.1
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]     Checking rustc-demangle v0.1.16
[INFO] [stderr]    Compiling quick-error v1.2.2
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]     Checking matches v0.1.8
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling matrixmultiply v0.1.15
[INFO] [stderr]    Compiling crc32fast v1.2.0
[INFO] [stderr]     Checking rustc-serialize v0.3.24
[INFO] [stderr]     Checking rawpointer v0.1.0
[INFO] [stderr]    Compiling ndarray v0.13.0
[INFO] [stderr]    Compiling ndarray v0.12.1
[INFO] [stderr]     Checking rawpointer v0.2.1
[INFO] [stderr]     Checking approx v0.1.1
[INFO] [stderr]     Checking adler32 v1.0.4
[INFO] [stderr]    Compiling bio v0.30.0
[INFO] [stderr]     Checking ordermap v0.3.5
[INFO] [stderr]     Checking fixedbitset v0.1.9
[INFO] [stderr]     Checking percent-encoding v2.1.0
[INFO] [stderr]     Checking bytecount v0.6.0
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking fnv v1.0.6
[INFO] [stderr]     Checking ansi_term v0.11.0
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking strsim v0.8.0
[INFO] [stderr]     Checking termcolor v0.3.6
[INFO] [stderr]    Compiling libloading v0.5.2
[INFO] [stderr]    Compiling num-complex v0.2.3
[INFO] [stderr]    Compiling num-integer v0.1.41
[INFO] [stderr]    Compiling bzip2-sys v0.1.7
[INFO] [stderr]    Compiling libz-sys v1.0.25
[INFO] [stderr]    Compiling lzma-sys v0.1.15
[INFO] [stderr]     Checking itertools v0.8.0
[INFO] [stderr]     Checking itertools v0.7.11
[INFO] [stderr]     Checking itertools v0.6.5
[INFO] [stderr]    Compiling thread_local v0.3.6
[INFO] [stderr]     Checking crossbeam-utils v0.6.6
[INFO] [stderr]     Checking rand_core v0.3.1
[INFO] [stderr]     Checking rand_jitter v0.1.4
[INFO] [stderr]     Checking c2-chacha v0.2.2
[INFO] [stderr]     Checking unicode-bidi v0.3.4
[INFO] [stderr]    Compiling semver v0.9.0
[INFO] [stderr]    Compiling fs-utils v1.1.1
[INFO] [stderr]     Checking matrixmultiply v0.2.3
[INFO] [stderr]    Compiling nom v4.2.3
[INFO] [stderr]     Checking miniz_oxide v0.3.2
[INFO] [stderr]    Compiling bv v0.11.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.3
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking arrayvec v0.4.11
[INFO] [stderr]     Checking rand_hc v0.1.0
[INFO] [stderr]     Checking rand_isaac v0.1.1
[INFO] [stderr]     Checking rand_xorshift v0.1.1
[INFO] [stderr]     Checking petgraph v0.4.13
[INFO] [stderr]    Compiling clang-sys v0.28.1
[INFO] [stderr]     Checking rand_os v0.1.3
[INFO] [stderr]     Checking terminal_size v0.1.8
[INFO] [stderr]     Checking rand_pcg v0.1.2
[INFO] [stderr]     Checking rand_chacha v0.1.1
[INFO] [stderr]     Checking regex-automata v0.1.8
[INFO] [stderr]     Checking fxhash v0.2.1
[INFO] [stderr]     Checking crossbeam-queue v0.1.2
[INFO] [stderr]    Compiling rustc_version v0.2.3
[INFO] [stderr]     Checking idna v0.2.0
[INFO] [stderr]     Checking uuid v0.6.5
[INFO] [stderr]     Checking term v0.5.2
[INFO] [stderr]     Checking num-traits v0.1.43
[INFO] [stderr]     Checking itertools-num v0.1.3
[INFO] [stderr]     Checking ordered-float v1.0.2
[INFO] [stderr]     Checking approx v0.3.2
[INFO] [stderr]     Checking backtrace v0.3.37
[INFO] [stderr]     Checking rand_core v0.5.1
[INFO] [stderr]    Compiling quote v1.0.2
[INFO] [stderr]     Checking rand v0.6.5
[INFO] [stderr]     Checking aho-corasick v0.7.6
[INFO] [stderr]     Checking csv-core v0.1.6
[INFO] [stderr]     Checking flate2 v1.0.11
[INFO] [stderr]    Compiling quote v0.6.13
[INFO] [stderr]     Checking rand_chacha v0.2.1
[INFO] [stderr]    Compiling memoffset v0.5.1
[INFO] [stderr]     Checking chrono v0.4.9
[INFO] [stderr]     Checking url v2.1.1
[INFO] [stderr]     Checking rand v0.7.2
[INFO] [stderr]     Checking num-complex v0.1.43
[INFO] [stderr]     Checking crossbeam-epoch v0.7.2
[INFO] [stderr]    Compiling cexpr v0.3.6
[INFO] [stderr]     Checking regex v1.3.1
[INFO] [stderr]     Checking crossbeam-deque v0.7.1
[INFO] [stderr]     Checking alga v0.5.4
[INFO] [stderr]     Checking statrs v0.11.0
[INFO] [stderr]     Checking rayon-core v1.6.0
[INFO] [stderr]     Checking simplelog v0.5.3
[INFO] [stderr]     Checking tempfile v3.1.0
[INFO] [stderr]     Checking rayon v1.2.0
[INFO] [stderr]     Checking os_type v2.2.0
[INFO] [stderr]    Compiling synstructure v0.10.2
[INFO] [stderr]    Compiling serde_derive v1.0.101
[INFO] [stderr]    Compiling snafu-derive v0.6.2
[INFO] [stderr]    Compiling strum_macros v0.16.0
[INFO] [stderr]    Compiling getset v0.0.9
[INFO] [stderr]    Compiling snafu-derive v0.5.0
[INFO] [stderr]    Compiling failure_derive v0.1.5
[INFO] [stderr]     Checking failure v0.1.5
[INFO] [stderr]    Compiling hts-sys v1.9.0 (https://github.com/rust-bio/rust-htslib.git?rev=37533bded4692a78cfe080378a09209b95dc3cca#37533bde)
[INFO] [stderr]     Checking snafu v0.6.0
[INFO] [stderr]     Checking snafu v0.5.0
[INFO] [stderr]     Checking serde v1.0.101
[INFO] [stderr]     Checking bio-types v0.5.1
[INFO] [stderr]     Checking bstr v0.2.8
[INFO] [stderr]     Checking vec_map v0.8.1
[INFO] [stderr]     Checking multimap v0.6.0
[INFO] [stderr]     Checking toml v0.4.10
[INFO] [stderr]     Checking sprs v0.6.5
[INFO] [stderr]     Checking clap v2.33.0
[INFO] [stderr]     Checking csv v1.1.1
[INFO] [stderr]     Checking human-panic v1.0.1
[INFO] [stderr]     Checking rust-htslib v0.26.1 (https://github.com/rust-bio/rust-htslib.git?rev=37533bded4692a78cfe080378a09209b95dc3cca#37533bde)
[INFO] [stderr]     Checking vartrix v1.1.14 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished dev [unoptimized + debuginfo] target(s) in 3m 46s
[INFO] running `Command { std: "docker" "inspect" "bc8b31de33456fd6ed4d9bdd8cd44407bb376551cba051c13910fd4042a2b9a8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bc8b31de33456fd6ed4d9bdd8cd44407bb376551cba051c13910fd4042a2b9a8", kill_on_drop: false }`
[INFO] [stdout] bc8b31de33456fd6ed4d9bdd8cd44407bb376551cba051c13910fd4042a2b9a8